RORC 11512

Name: RORC	Sequence: fasta or formatted (518aa)		NCBI GI: 19743909
Description: RAR-related orphan receptor C isoform a		Referenced in: Nuclear Receptors
Other entries for this name: alt prot [497aa] RAR-related orphan receptor C isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 37 2 C cysteine 4.1 21 1 D aspartate 2.9 15 1 E glutamate 7.3 38 2 F phenylalanine 3.7 19 2 G glycine 6.9 36 2 H histidine 4.1 21 3 I isoleucine 3.3 17 1 K lysine 5.2 27 2 L leucine 10.8 56 2 M methionine 1.7 9 1 N asparagine 2.3 12 2 P proline 5.2 27 2 Q glutamine 7.1 37 5 R arginine 7.5 39 2 S serine 8.9 46 2 T threonine 4.1 21 1 V valine 4.2 22 2 W tryptophan 0.4 2 1 Y tyrosine 3.1 16 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 RAR-related orphan receptor C isoform a RORC 0.956 RAR-related orphan receptor C isoform b RORA 0.431 RAR-related orphan receptor A isoform a RORA 0.417 RAR-related orphan receptor A isoform d RORA 0.417 RAR-related orphan receptor A isoform c RORA 0.417 RAR-related orphan receptor A isoform b RORB 0.396 RAR-related orphan receptor B NR1D1 0.189 nuclear receptor subfamily 1, group D, member 1 [Hom... NR1D2 0.102 nuclear receptor subfamily 1, group D, member 2 iso... NR1D2 0.102 nuclear receptor subfamily 1, group D, member 2 iso... PPARG 0.089 peroxisome proliferative activated receptor gamma i... PPARG 0.089 peroxisome proliferative activated receptor gamma is... PPARG 0.089 peroxisome proliferative activated receptor gamma i... PPARG 0.089 peroxisome proliferative activated receptor gamma i... NR2F2 0.088 nuclear receptor subfamily 2, group F, member 2 isof... NR2F1 0.087 nuclear receptor subfamily 2, group F, member 1 [Homo... RARG 0.087 retinoic acid receptor, gamma isoform 2 RARG 0.087 retinoic acid receptor, gamma isoform 1 RARB 0.086 retinoic acid receptor, beta isoform 1 RARA 0.085 retinoic acid receptor, alpha isoform 1 RARA 0.085 retinoic acid receptor, alpha isoform 2 RARA 0.085 retinoic acid receptor, alpha isoform 1 NR2C2 0.084 nuclear receptor subfamily 2, group C, member 2 [Hom... NR2C1 0.084 nuclear receptor subfamily 2, group C, member 1 iso... RXRB 0.083 retinoid X receptor, beta PPARA 0.083 peroxisome proliferative activated receptor, alpha [... PPARA 0.083 peroxisome proliferative activated receptor, alpha [H... RXRA 0.082 retinoid X receptor, alpha NR4A3 0.081 nuclear receptor subfamily 4, group A, member 3 isof... NR4A3 0.081 nuclear receptor subfamily 4, group A, member 3 isof... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.