Guide to the Human Genome
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Name: PRSSL1 Sequence: fasta or formatted (283aa) NCBI GI: 47551347
Description:

protease, serine-like 1

Referenced in:

Serine Proteases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         24           2
 C cysteine            3.2          9           1
 D aspartate           4.2         12           1
 E glutamate           2.1          6           2
 F phenylalanine       3.2          9           1
 G glycine            12.0         34           2
 H histidine           4.6         13           2
 I isoleucine          1.8          5           2
 K lysine              1.4          4           1
 L leucine            10.6         30           2
 M methionine          2.1          6           1
 N asparagine          1.4          4           1
 P proline             8.8         25           2
 Q glutamine           2.1          6           2
 R arginine            8.5         24           2
 S serine              6.7         19           2
 T threonine           6.4         18           2
 V valine              8.5         24           2
 W tryptophan          2.8          8           1
 Y tyrosine            1.1          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protease, serine-like 1 
CFD                   0.263   complement factor D preproprotein 
GZMM                  0.253   granzyme M precursor 
ELANE                 0.229   neutrophil elastase preproprotein 
KLK7                  0.218   stratum corneum chymotryptic enzyme preproprotein [H...
KLK7                  0.218   stratum corneum chymotryptic enzyme preproprotein [Ho...
GZMB                  0.211   granzyme B precursor 
KLK14                 0.206   kallikrein 14 preproprotein 
KLK13                 0.205   kallikrein 13 precursor 
GZMH                  0.203   granzyme H 
PRTN3                 0.203   myeloblastin 
GZMK                  0.203   granzyme K precursor 
PRSS3                 0.201   mesotrypsin isoform 1 preproprotein 
PRSS3                 0.201   mesotrypsin isoform 2 preproprotein 
KLK15                 0.201   kallikrein-related peptidase 15 isoform 4 preproprot...
PRSS1                 0.198   protease, serine, 1 preproprotein 
AZU1                  0.194   azurocidin 1 preproprotein 
CTSG                  0.194   cathepsin G preproprotein 
GZMA                  0.194   granzyme A precursor 
KLK8                  0.192   kallikrein 8 isoform 2 
CMA1                  0.191   chymase 1, mast cell preproprotein 
PRSS2                 0.191   protease, serine, 2 preproprotein 
KLK4                  0.191   kallikrein-related peptidase 4 preproprotein 
OVCH1                 0.189   ovochymase 1 
KLK8                  0.185   kallikrein 8 isoform 1 preproprotein 
TMPRSS5               0.185   transmembrane protease, serine 5 
CELA3B                0.180   elastase 3B, pancreatic preproprotein 
KLK3                  0.180   prostate specific antigen isoform 1 preproprotein [Ho...
KLK6                  0.177   kallikrein-related peptidase 6 isoform A preproprote...
KLK6                  0.177   kallikrein-related peptidase 6 isoform A preproprotei...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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