Guide to the Human Genome
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Name: MAGI3 Sequence: fasta or formatted (1481aa) NCBI GI: 218505835
Description:

membrane-associated guanylate kinase-related 3 isoform 1

Referenced in:

PDZ Domain
WW Domain

Other entries for this name:
alt prot [1125aa] membrane-associated guanylate kinase-related  3 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         72           2
 C cysteine            1.1         16           2
 D aspartate           5.8         86           2
 E glutamate           7.6        113           4
 F phenylalanine       2.4         36           1
 G glycine             8.6        128           3
 H histidine           2.5         37           2
 I isoleucine          5.2         77           2
 K lysine              8.8        130           4
 L leucine             7.2        106           4
 M methionine          1.7         25           2
 N asparagine          4.5         67           2
 P proline             7.6        113           3
 Q glutamine           4.9         72           2
 R arginine            5.1         75           2
 S serine              8.2        122           3
 T threonine           5.0         74           3
 V valine              6.4         95           2
 W tryptophan          0.7         10           1
 Y tyrosine            1.8         27           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   membrane-associated guanylate kinase-related  3 iso... 
MAGI3                 0.753   membrane-associated guanylate kinase-related  3 iso...
MAGI2                 0.364   membrane associated guanylate kinase, WW and PDZ dom...
MAGI1                 0.310   membrane associated guanylate kinase, WW and PDZ dom...
MAGI1                 0.303   membrane associated guanylate kinase, WW and PDZ dom...
MAGI1                 0.302   membrane associated guanylate kinase, WW and PDZ dom...
MPDZ                  0.033   multiple PDZ domain protein 
INADL                 0.030   InaD-like 
DLG2                  0.029   chapsyn-110 isoform 3 
DLG1                  0.028   discs, large homolog 1 isoform 1 
DLG1                  0.028   discs, large homolog 1 isoform 2 
PTPN13                0.027   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.027   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.027   protein tyrosine phosphatase, non-receptor type 13 is...
SCRIB                 0.026   scribble isoform b 
SCRIB                 0.026   scribble isoform a 
PTPN13                0.025   protein tyrosine phosphatase, non-receptor type 13 i...
DLG3                  0.024   synapse-associated protein 102 isoform a 
WWC2                  0.022   WW and C2 domain containing 2 
PDZK1                 0.021   PDZ domain containing 1 
PARD3                 0.021   partitioning-defective protein 3 homolog 
WWC1                  0.021   WW and C2 domain containing 1 isoform 3 
WWC1                  0.021   WW and C2 domain containing 1 isoform 2 
WWC1                  0.021   WW and C2 domain containing 1 isoform 1 
FRMPD2                0.019   FERM and PDZ domain containing 2 isoform 1 
FRMPD2                0.019   FERM and PDZ domain containing 2 isoform 3 
LNX2                  0.019   ligand of numb-protein X 2 
MAGIX                 0.018   MAGI family member, X-linked isoform b 
MAGIX                 0.018   MAGI family member, X-linked isoform a 
PDZD2                 0.018   PDZ domain containing 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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