Guide to the Human Genome
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Name: WWC3 Sequence: fasta or formatted (1092aa) NCBI GI: 38570149
Description:

WWC family member 3

Referenced in:

BCL2 Pathways, Caspases, and Programmed Cell Death

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         88           2
 C cysteine            1.8         20           2
 D aspartate           5.8         63           2
 E glutamate           9.1         99           3
 F phenylalanine       2.5         27           2
 G glycine             4.8         52           2
 H histidine           1.8         20           2
 I isoleucine          3.4         37           2
 K lysine              4.6         50           2
 L leucine            11.4        124           2
 M methionine          1.4         15           1
 N asparagine          1.7         19           1
 P proline             5.7         62           3
 Q glutamine           6.4         70           3
 R arginine            9.1         99           2
 S serine             10.4        114           2
 T threonine           5.0         55           2
 V valine              4.2         46           1
 W tryptophan          0.5          6           1
 Y tyrosine            2.4         26           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WWC family member 3 
WWC2                  0.348   WW and C2 domain containing 2 
WWC1                  0.321   WW and C2 domain containing 1 isoform 3 
WWC1                  0.321   WW and C2 domain containing 1 isoform 2 
WWC1                  0.320   WW and C2 domain containing 1 isoform 1 
PLEC1                 0.015   plectin 1 isoform 11 
PLEC1                 0.015   plectin 1 isoform 10 
PLEC1                 0.015   plectin 1 isoform 8 
PLEC1                 0.015   plectin 1 isoform 7 
PLEC1                 0.015   plectin 1 isoform 6 
PLEC1                 0.015   plectin 1 isoform 3 
PLEC1                 0.015   plectin 1 isoform 2 
PLEC1                 0.015   plectin 1 isoform 1 
SLMAP                 0.015   sarcolemma associated protein 
ERC2                  0.013   cytomatrix protein p110 
MYH9                  0.013   myosin, heavy polypeptide 9, non-muscle 
LOC728080             0.011   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.011   PREDICTED: similar to Golgin subfamily A member 8-l...
CGN                   0.011   cingulin 
GOLGB1                0.011   golgi autoantigen, golgin subfamily b, macrogolgin ...
LOC727909             0.011   PREDICTED: similar to Golgin subfamily A member 8-l...
MYH10                 0.011   myosin, heavy polypeptide 10, non-muscle 
DST                   0.011   dystonin isoform 1e precursor 
TPR                   0.011   nuclear pore complex-associated protein TPR 
MYH7B                 0.011   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
LOC728080             0.011   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.011   PREDICTED: similar to Golgin subfamily A member 8-l...
NUMA1                 0.011   nuclear mitotic apparatus protein 1 
MYH6                  0.011   myosin heavy chain 6 
LOC727909             0.010   PREDICTED: similar to Golgin subfamily A member 8-l...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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