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Search of human proteins with 120444924
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|120444924 ATP/GTP binding protein-like 1 [Homo sapiens]
(1066 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|120444924 ATP/GTP binding protein-like 1 [Homo sapiens] 2167 0.0
gi|170763513 ATP/GTP binding protein 1 [Homo sapiens] 709 0.0
gi|222352158 carboxypeptidase 3, cytosolic [Homo sapiens] 335 1e-91
gi|31657119 carboxypeptidase 2, cytosolic [Homo sapiens] 315 1e-85
gi|190194403 ATP/GTP binding protein-like 4 [Homo sapiens] 211 2e-54
gi|118421091 ATP/GTP binding protein-like 5 isoform 1 [Homo sapi... 133 1e-30
gi|78482633 ATP/GTP binding protein-like 5 isoform 3 [Homo sapiens] 133 1e-30
gi|210032580 SET domain containing 1B [Homo sapiens] 41 0.007
gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens] 40 0.009
gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens] 38 0.058
gi|62750349 histone deacetylase 5 isoform 3 [Homo sapiens] 37 0.13
gi|62750347 histone deacetylase 5 isoform 1 [Homo sapiens] 37 0.13
gi|221136848 neuroblastoma breakpoint family, member 6 isoform 2... 36 0.17
gi|221136844 neuroblastoma breakpoint family, member 6 isoform 1... 36 0.17
gi|55956788 nucleolin [Homo sapiens] 36 0.17
gi|221218991 neuroblastoma breakpoint family, member 4 [Homo sap... 36 0.17
gi|239756451 PREDICTED: hypothetical protein XP_002344991 [Homo ... 36 0.22
gi|239745387 PREDICTED: hypothetical protein XP_002343486 [Homo ... 36 0.22
gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 famil... 35 0.29
gi|42476101 TFIIA alpha, p55 isoform 2 [Homo sapiens] 35 0.49
gi|7706735 TFIIA alpha, p55 isoform 1 [Homo sapiens] 35 0.49
gi|187960109 RNA binding motif protein 28 [Homo sapiens] 35 0.49
gi|86262149 zinc finger and BTB domain containing 7C [Homo sapiens] 35 0.49
gi|239756368 PREDICTED: similar to acidic (leucine-rich) nuclear... 34 0.64
gi|239750893 PREDICTED: similar to acidic (leucine-rich) nuclear... 34 0.64
gi|31543091 MAK16 homolog [Homo sapiens] 33 1.1
gi|30061491 erythrocyte membrane protein band 4.1-like 1 isoform... 33 1.1
gi|60498973 myelin transcription factor 1-like [Homo sapiens] 33 1.1
gi|4502131 amyloid beta A4 precursor protein-binding, family B, ... 33 1.4
gi|22035554 amyloid beta A4 precursor protein-binding, family B,... 33 1.4
>gi|120444924 ATP/GTP binding protein-like 1 [Homo sapiens]
Length = 1066
Score = 2167 bits (5616), Expect = 0.0
Identities = 1066/1066 (100%), Positives = 1066/1066 (100%)
Query: 1 MISKGGSEALLQTLVDTARTAPPDYDILLPLFRLLAKVGLRDKKIGRKALELEALDVTLI 60
MISKGGSEALLQTLVDTARTAPPDYDILLPLFRLLAKVGLRDKKIGRKALELEALDVTLI
Sbjct: 1 MISKGGSEALLQTLVDTARTAPPDYDILLPLFRLLAKVGLRDKKIGRKALELEALDVTLI 60
Query: 61 LARKNLSHGQNLLHCLWALRVFASSVSMGAMLGINGAMELLFKVITPYTRKRTQAIRAAT 120
LARKNLSHGQNLLHCLWALRVFASSVSMGAMLGINGAMELLFKVITPYTRKRTQAIRAAT
Sbjct: 61 LARKNLSHGQNLLHCLWALRVFASSVSMGAMLGINGAMELLFKVITPYTRKRTQAIRAAT 120
Query: 121 EVLAALLKSKSNGRRAVNRGYVTSLLGLHQDWHSHDTANAYVQIRRGLLLCLRHIAALRS 180
EVLAALLKSKSNGRRAVNRGYVTSLLGLHQDWHSHDTANAYVQIRRGLLLCLRHIAALRS
Sbjct: 121 EVLAALLKSKSNGRRAVNRGYVTSLLGLHQDWHSHDTANAYVQIRRGLLLCLRHIAALRS 180
Query: 181 GREAFLAAQGMEILFSTTQNCLDDKSMEPVISVVLQILRQCYPTSPLPLVTASSAYAFPV 240
GREAFLAAQGMEILFSTTQNCLDDKSMEPVISVVLQILRQCYPTSPLPLVTASSAYAFPV
Sbjct: 181 GREAFLAAQGMEILFSTTQNCLDDKSMEPVISVVLQILRQCYPTSPLPLVTASSAYAFPV 240
Query: 241 PGCITTEPPHDLPEEDFEDDGDDEVDKDSDTEDGKVEDDDLETDVNKLSSKPGLDRPEEE 300
PGCITTEPPHDLPEEDFEDDGDDEVDKDSDTEDGKVEDDDLETDVNKLSSKPGLDRPEEE
Sbjct: 241 PGCITTEPPHDLPEEDFEDDGDDEVDKDSDTEDGKVEDDDLETDVNKLSSKPGLDRPEEE 300
Query: 301 LMQYEVMCLELSYSFEELQSKLGDDLNSEKTQYANHHHIPAAASSKQHCYSKDQSSCGQE 360
LMQYEVMCLELSYSFEELQSKLGDDLNSEKTQYANHHHIPAAASSKQHCYSKDQSSCGQE
Sbjct: 301 LMQYEVMCLELSYSFEELQSKLGDDLNSEKTQYANHHHIPAAASSKQHCYSKDQSSCGQE 360
Query: 361 REYAVQTSLLCRVKTGRSTVHLGSKKNPGVNLYQNVQSNSLRRDSSESEIPDIQASPKAD 420
REYAVQTSLLCRVKTGRSTVHLGSKKNPGVNLYQNVQSNSLRRDSSESEIPDIQASPKAD
Sbjct: 361 REYAVQTSLLCRVKTGRSTVHLGSKKNPGVNLYQNVQSNSLRRDSSESEIPDIQASPKAD 420
Query: 421 AWDVDAIFCPRMSASFSNSTRTREVVKVIDKLLQTHLKRVPFHDPYLYMAKARRTSSVVD 480
AWDVDAIFCPRMSASFSNSTRTREVVKVIDKLLQTHLKRVPFHDPYLYMAKARRTSSVVD
Sbjct: 421 AWDVDAIFCPRMSASFSNSTRTREVVKVIDKLLQTHLKRVPFHDPYLYMAKARRTSSVVD 480
Query: 481 FKMMAFPDVWGHCPPPTTQPMLERKCGVQRIRIFEDIRRLIQPSDVINKVVFSLDEPWPL 540
FKMMAFPDVWGHCPPPTTQPMLERKCGVQRIRIFEDIRRLIQPSDVINKVVFSLDEPWPL
Sbjct: 481 FKMMAFPDVWGHCPPPTTQPMLERKCGVQRIRIFEDIRRLIQPSDVINKVVFSLDEPWPL 540
Query: 541 QDNASNCLRFFSKFESGNLRKAIQVREFEYDLLVNADVNSTQHQQWFYFKVSGMQAAIPY 600
QDNASNCLRFFSKFESGNLRKAIQVREFEYDLLVNADVNSTQHQQWFYFKVSGMQAAIPY
Sbjct: 541 QDNASNCLRFFSKFESGNLRKAIQVREFEYDLLVNADVNSTQHQQWFYFKVSGMQAAIPY 600
Query: 601 HFNIINCEKPNSQFNYGMQPTLYSVKEALLGKPTWIRTGHEICYYKNHYRQSTAVAGGAS 660
HFNIINCEKPNSQFNYGMQPTLYSVKEALLGKPTWIRTGHEICYYKNHYRQSTAVAGGAS
Sbjct: 601 HFNIINCEKPNSQFNYGMQPTLYSVKEALLGKPTWIRTGHEICYYKNHYRQSTAVAGGAS 660
Query: 661 GKCYYTLTFAVTFPHSEDVCYLAYHYPYTYTALMTHLDILEKSVNLKEVYFRQDVLCQTL 720
GKCYYTLTFAVTFPHSEDVCYLAYHYPYTYTALMTHLDILEKSVNLKEVYFRQDVLCQTL
Sbjct: 661 GKCYYTLTFAVTFPHSEDVCYLAYHYPYTYTALMTHLDILEKSVNLKEVYFRQDVLCQTL 720
Query: 721 GGNPCPLVTITAMPESNSDEHLEQFRHRPYQVITARVHPGESNASWVMKGTLEFLVSSDP 780
GGNPCPLVTITAMPESNSDEHLEQFRHRPYQVITARVHPGESNASWVMKGTLEFLVSSDP
Sbjct: 721 GGNPCPLVTITAMPESNSDEHLEQFRHRPYQVITARVHPGESNASWVMKGTLEFLVSSDP 780
Query: 781 VARLLRENFIFKIIPMLNPDGVINGNHRCSLSGEDLNRQWLSPSAHLQPTIYHAKGLLYH 840
VARLLRENFIFKIIPMLNPDGVINGNHRCSLSGEDLNRQWLSPSAHLQPTIYHAKGLLYH
Sbjct: 781 VARLLRENFIFKIIPMLNPDGVINGNHRCSLSGEDLNRQWLSPSAHLQPTIYHAKGLLYH 840
Query: 841 LSSIGRSPVVFCDFHGHSQKKNVFLYGCSIKETLWQAACTVGTSTILEEVNYRTLPKILD 900
LSSIGRSPVVFCDFHGHSQKKNVFLYGCSIKETLWQAACTVGTSTILEEVNYRTLPKILD
Sbjct: 841 LSSIGRSPVVFCDFHGHSQKKNVFLYGCSIKETLWQAACTVGTSTILEEVNYRTLPKILD 900
Query: 901 KLAPAFTMSSCSFLVEKSRASTARVVVWREMGVSRSYTMESSYCGCNQGPYQCTQRLLER 960
KLAPAFTMSSCSFLVEKSRASTARVVVWREMGVSRSYTMESSYCGCNQGPYQCTQRLLER
Sbjct: 901 KLAPAFTMSSCSFLVEKSRASTARVVVWREMGVSRSYTMESSYCGCNQGPYQCTQRLLER 960
Query: 961 TKNERAHPVDGLQGLQFGTRELEEMGAMFCLGLLILELKSASCSHQLLAQAATLLSAEED 1020
TKNERAHPVDGLQGLQFGTRELEEMGAMFCLGLLILELKSASCSHQLLAQAATLLSAEED
Sbjct: 961 TKNERAHPVDGLQGLQFGTRELEEMGAMFCLGLLILELKSASCSHQLLAQAATLLSAEED 1020
Query: 1021 ALDQHLQRLKSSNFLPKHIWFAYHFFAITNFFKMNLLLHVSPVCDT 1066
ALDQHLQRLKSSNFLPKHIWFAYHFFAITNFFKMNLLLHVSPVCDT
Sbjct: 1021 ALDQHLQRLKSSNFLPKHIWFAYHFFAITNFFKMNLLLHVSPVCDT 1066
>gi|170763513 ATP/GTP binding protein 1 [Homo sapiens]
Length = 1186
Score = 709 bits (1830), Expect = 0.0
Identities = 336/561 (59%), Positives = 422/561 (75%), Gaps = 24/561 (4%)
Query: 463 HDPYLYMAKARRTSSVVDFKMMAFPDVWGHCPPPTTQPMLERKCGVQRIRIFEDIRRLIQ 522
HDP LY+ + T SV ++ +A+PD +GH PPP +P+LER GVQR +I +DI RLI
Sbjct: 585 HDPDLYIEIVKNTKSVPEYSEVAYPDYFGHIPPPFKEPILERPYGVQRTKIAQDIERLIH 644
Query: 523 PSDVINKVVFSLDEPWPLQDNASNCLRFFSKFESGNLRKAIQVREFEYDLLVNADVNSTQ 582
SD+I++VV+ LD P + L+F SKFESGNLRK IQ+R+ EYDL++N+D+NS
Sbjct: 645 QSDIIDRVVYDLDNPNYTIPEEGDILKFNSKFESGNLRKVIQIRKNEYDLILNSDINSNH 704
Query: 583 HQQWFYFKVSGMQAAIPYHFNIINCEKPNSQFNYGMQPTLYSVKEALLGKPTWIRTGHEI 642
+ QWFYF+VSGM+ + Y FNIINCEK NSQFNYGMQP +YSV+EAL +P WIR G +I
Sbjct: 705 YHQWFYFEVSGMRPGVAYRFNIINCEKSNSQFNYGMQPLMYSVQEALNARPWWIRMGTDI 764
Query: 643 CYYKNHYRQSTAVAGGASGKCYYTLTFAVTFPHSEDVCYLAYHYPYTYTALMTHLDILEK 702
CYYKNH+ +S+ AGG GK YYT+TF V FPH +DVCY AYHYPYTY+ L HL LE
Sbjct: 765 CYYKNHFSRSSVAAGGQKGKSYYTITFTVNFPHKDDVCYFAYHYPYTYSTLQMHLQKLES 824
Query: 703 SVNLKEVYFRQDVLCQTLGGNPCPLVTITAMPESNSDEHLEQFRHRPYQVITARVHPGES 762
+ N +++YFR+DVLC+TL GN CPLVTITAMPESN EH+ FR+RPY ++ARVHPGE+
Sbjct: 825 AHNPQQIYFRKDVLCETLSGNSCPLVTITAMPESNYYEHICHFRNRPYVFLSARVHPGET 884
Query: 763 NASWVMKGTLEFLVSSDPVARLLRENFIFKIIPMLNPDGVINGNHRCSLSGEDLNRQWLS 822
NASWVMKGTLE+L+S++P A+ LRE++IFKI+PMLNPDGVINGNHRCSLSGEDLNRQW S
Sbjct: 885 NASWVMKGTLEYLMSNNPTAQSLRESYIFKIVPMLNPDGVINGNHRCSLSGEDLNRQWQS 944
Query: 823 PSAHLQPTIYHAKGLLYHLSSIGRSPVVFCDFHGHSQKKNVFLYGCSIKETLWQAACTVG 882
PS L PTIYHAKGLL +L+++ R P+V+CD+HGHS+KKNVF+YGCSIKET+W
Sbjct: 945 PSPDLHPTIYHAKGLLQYLAAVKRLPLVYCDYHGHSRKKNVFMYGCSIKETVWHTNDNAT 1004
Query: 883 TSTILEEVNYRTLPKILDKLAPAFTMSSCSFLVEKSRASTARVVVWREMGVSRSYTMESS 942
+ ++E+ YRTLPKIL +APAF MSSCSF+VEKS+ STARVVVWRE+GV RSYTMES+
Sbjct: 1005 SCDVVEDTGYRTLPKILSHIAPAFCMSSCSFVVEKSKESTARVVVWREIGVQRSYTMEST 1064
Query: 943 YCGCNQGPYQCTQRLLERTKNERAHPVDGLQGLQFGTRELEEMGAMFCLGLLILELKSAS 1002
CGC+QG Y +GLQ GTRELEEMGA FC+GLL L+ ++
Sbjct: 1065 LCGCDQGKY---------------------KGLQIGTRELEEMGAKFCVGLLRLKRLTSP 1103
Query: 1003 CSHQLLAQAATLLSAEEDALD 1023
+ L ++LL E D ++
Sbjct: 1104 LEYNL---PSSLLDFENDLIE 1121
Score = 205 bits (521), Expect = 2e-52
Identities = 120/320 (37%), Positives = 191/320 (59%), Gaps = 32/320 (10%)
Query: 1 MISKGGSEALLQTLVDTARTAPPDYDILLPLFRLLAKVGLRDKKIGRKALELEALDVTLI 60
+++KGGS+ LLQ L++ ++ +PP D+++ + +LAK+G +DKK G KA AL++TL
Sbjct: 105 LVTKGGSQILLQLLMNASKESPPHEDLMVQIHSILAKIGPKDKKFGVKARINGALNITLN 164
Query: 61 LARKNLSHGQNLLHCLWALRVFASSVSMGAMLGINGAMELLFKVITPYTRKRTQAIRAAT 120
L ++NL + + +L CL LRV++++ LG NG +EL+FK+I P+++K + I+ A
Sbjct: 165 LVKQNLQNHRLVLPCLQLLRVYSANSVNSVSLGKNGVVELMFKIIGPFSKKNSSLIKVAL 224
Query: 121 EVLAALLKSKSNGRRAVNRGYVTSLLGLHQDWHSHDTANAYVQIRRGLLLCLRHIAALRS 180
+ LAALLKSK+N RRAV+RGYV LL ++ DWH HD + + IR+G+L L+ + ++
Sbjct: 225 DTLAALLKSKTNARRAVDRGYVQVLLTIYVDWHRHDNRHRNMLIRKGILQSLKSVTNIKL 284
Query: 181 GREAFLAAQGMEILFSTTQNCLDDKSMEPVISVVLQILRQCYPTSPLPLVTASSAYAFPV 240
GR+AF+ A GM+IL++T+Q PVI V T P+ + Y+ P
Sbjct: 285 GRKAFIDANGMKILYNTSQ--------LPVIPV----------TGPV-----AQLYSLP- 320
Query: 241 PGCITTEPPHDLPEEDFEDDGDDEVDKDSDTEDG---KVEDDDLETDVNKLSSKPGLDRP 297
E + E D DD D E + +++ ED ++DD+ETD+NKL + R
Sbjct: 321 -----PEVDDVVDESDDNDDIDVEAENETENEDDLDQNFKNDDIETDINKLKPQQEPGRT 375
Query: 298 EEELMQYEVMCLELSYSFEE 317
E+L YE + EL F++
Sbjct: 376 IEDLKMYEHLFPELVDDFQD 395
>gi|222352158 carboxypeptidase 3, cytosolic [Homo sapiens]
Length = 920
Score = 335 bits (860), Expect = 1e-91
Identities = 182/454 (40%), Positives = 269/454 (59%), Gaps = 50/454 (11%)
Query: 542 DNASNCLRFFSKFESGNLRKAIQVREFEYDLLVNADVNSTQHQQWFYFKVSGMQAAIPYH 601
D N L F ++FESGNL+K ++V E+EY L V D+ + +H QW+YF+V+ M+A I Y
Sbjct: 163 DYRDNTLMFEARFESGNLQKVVKVAEYEYQLTVRPDLFTNKHTQWYYFQVTNMRAGIVYR 222
Query: 602 FNIINCEKPNSQFNYGMQPTLYSVKEALLGKPTWIRTGHEICYYKNHYRQSTAVAGGASG 661
F I+N KP S ++ GM+P YS KEA W R G +I YY+N+ G G
Sbjct: 223 FTIVNFTKPASLYSRGMRPLFYSEKEAKAHHIGWQRIGDQIKYYRNN--------PGQDG 274
Query: 662 KCYYTLTFAVTFPHSEDVCYLAYHYPYTYTALMTHLDILEKSVNLKEVYFRQDVLCQTLG 721
+ Y++LT+ FPH++D CY A+ YPYTYT L +L + ++ + + VLC TL
Sbjct: 275 RHYFSLTWTFQFPHNKDTCYFAHCYPYTYTNLQEYLSGINNDP-VRSKFCKIRVLCHTLA 333
Query: 722 GNPCPLVTITAMPESNSDEHLEQFRHRPYQVITARVHPGESNASWVMKGTLEFLVSSDPV 781
N ++TIT P NSD R R ++TARVHPGE+N+SW+MKG L++++ +
Sbjct: 334 RNMVYILTITT-PLKNSDS-----RKRKAVILTARVHPGETNSSWIMKGFLDYILGNSSD 387
Query: 782 ARLLRENFIFKIIPMLNPDGVINGNHRCSLSGEDLNRQWLSPSAHLQPTIYHAKGLLYHL 841
A+LLR+ F+FK++PMLNPDGVI GN+RCSL+G DLNR + S P++++ + +++ L
Sbjct: 388 AQLLRDTFVFKVVPMLNPDGVIVGNYRCSLAGRDLNRNYTSLLKESFPSVWYTRNMVHRL 447
Query: 842 SSIGRSPVVFCDFHGHSQKKNVFLYGCSIKETLWQAACTVGTSTILEEVNYRTLPKILDK 901
R +++CD HGHS+K+N+F+YGC + + T+ + R P +L K
Sbjct: 448 ME-KREVILYCDLHGHSRKENIFMYGCDGSDR---------SKTLY--LQQRIFPLMLSK 495
Query: 902 LAP-AFTMSSCSFLVEKSRASTARVVVWREMGVSRSYTMESSYCGCNQGPYQCTQRLLER 960
P F+ S+C F V+KS+ T RVV+W+ MG+ S+TME+++CG G
Sbjct: 496 NCPDKFSFSACKFNVQKSKEGTGRVVMWK-MGIRNSFTMEATFCGSTLG----------- 543
Query: 961 TKNERAHPVDGLQGLQFGTRELEEMGAMFCLGLL 994
N+R G F T++LE MG FC LL
Sbjct: 544 --NKR--------GTHFSTKDLESMGYHFCDSLL 567
>gi|31657119 carboxypeptidase 2, cytosolic [Homo sapiens]
Length = 902
Score = 315 bits (808), Expect = 1e-85
Identities = 174/434 (40%), Positives = 255/434 (58%), Gaps = 30/434 (6%)
Query: 540 LQDNASNCLRFFSKFESGNLRKAIQVREFEYDLLVNADVNSTQHQQWFYFKVSGMQAAIP 599
LQ N L F S+FESGNL+KA++V +EY+L + D+ + +H QWFYF+V +
Sbjct: 258 LQGPEDNTLLFESRFESGNLQKAVRVDTYEYELTLRTDLYTNKHTQWFYFRVQNTRKDAT 317
Query: 600 YHFNIINCEKPNSQFNYGMQPTLYSVKEALLGKPTWIRTGHEICYYKNHYRQSTAVAGGA 659
Y F I+N KP S + GM+P LYS +A W R G+EI YYKN+
Sbjct: 318 YRFTIVNLLKPKSLYTVGMKPLLYSQLDANTRNIGWRREGNEIKYYKNNTDDGQ------ 371
Query: 660 SGKCYYTLTFAVTFPHSEDVCYLAYHYPYTYTALMTHLDILEKSVNLKEVYFRQDVLCQT 719
+ +Y LT+ + FP+ +D C+ A+ YPYTYT L +L + + ++ + + LC++
Sbjct: 372 --QPFYCLTWTIQFPYDQDTCFFAHFYPYTYTDLQCYLLSVANNP-IQSQFCKLQTLCRS 428
Query: 720 LGGNPCPLVTITAMPESNSDEHLEQFRHRPYQVITARVHPGESNASWVMKGTLEFLVSSD 779
L GN L+TIT N + ++ + V++ARVHPGESN SWVMKG L+F++S+
Sbjct: 429 LAGNTVYLLTIT-----NPSQTPQEAAAKKAVVLSARVHPGESNGSWVMKGFLDFILSNS 483
Query: 780 PVARLLRENFIFKIIPMLNPDGVINGNHRCSLSGEDLNRQWLSPSAHLQPTIYHAKGLLY 839
P A+LLR+ F+FK++PMLNPDGVI GN+RCSL+G DLNR + + P I++ + ++
Sbjct: 484 PDAQLLRDIFVFKVLPMLNPDGVIVGNYRCSLAGRDLNRHYKTILKESFPCIWYTRNMIK 543
Query: 840 HLSSIGRSPVVFCDFHGHSQKKNVFLYGCSIKETLWQAACTVGTSTILEEVNYRTLPKIL 899
L R +++CDFHGHS+K N+FLYGC+ + ++ R P +L
Sbjct: 544 RLLE-EREVLLYCDFHGHSRKNNIFLYGCNNNNRKYW-------------LHERVFPLML 589
Query: 900 DKLAP-AFTMSSCSFLVEKSRASTARVVVWREMGVSRSYTMESSYCGCNQGPYQCTQRLL 958
K AP F+ SC+F V+K + T RVV+WR MG+ SYTMES++ G G + T +
Sbjct: 590 CKNAPDKFSFHSCNFKVQKCKEGTGRVVMWR-MGILNSYTMESTFGGSTLGNKRDTHFTI 648
Query: 959 ERTKNERAHPVDGL 972
E K+ H D L
Sbjct: 649 EDLKSLGYHVCDTL 662
>gi|190194403 ATP/GTP binding protein-like 4 [Homo sapiens]
Length = 503
Score = 211 bits (538), Expect = 2e-54
Identities = 148/404 (36%), Positives = 208/404 (51%), Gaps = 51/404 (12%)
Query: 548 LRFFSKFESGNLRKAIQVREFEYDLLVNADVNSTQHQQWFYFKVSGMQAAIPYHFNIINC 607
L F + FESGNL + QV EFEYDL + D + + + WF F V ++ + FNI+N
Sbjct: 44 LIFDACFESGNLGRVDQVSEFEYDLFIRPDTCNPRFRVWFNFTVENVKESQRVIFNIVNF 103
Query: 608 EKPNSQFNYGMQPTLYSVKEALLGKPTWIRTGHEICYYKNHYRQSTAVAGGASGKCYYTL 667
K S + GM P + S +P W R + YY YR + Y +
Sbjct: 104 SKTKSLYRDGMAPMVKSTS-----RPKWQRLPPKNVYY---YRCP-------DHRKNYVM 148
Query: 668 TFAVTFPHSEDVCYLAYHYPYTYTALMTHLDILEKSVNLKEVYFRQDVLCQTLGGNPCPL 727
+FA F ED+ AY YPYTYT +LD L+K N+ YF ++ L Q++ L
Sbjct: 149 SFAFCFDREEDIYQFAYCYPYTYTRFQHYLDSLQKR-NMD--YFFREQLGQSVQQRKLDL 205
Query: 728 VTITAMPESNSDEHLEQFRHRPYQVITARVHPGESNASWVMKGTLEFLVSSDPVARLLRE 787
+TIT S ++L + + IT RVHPGE+ +S+V +G ++FLVS P+A +LRE
Sbjct: 206 LTIT------SPDNLREGAEQKVVFITGRVHPGETPSSFVCQGIIDFLVSQHPIACVLRE 259
Query: 788 NFIFKIIPMLNPDGVINGNHRCSLSGEDLNRQWLSPSAHLQPTIYHAKGLLYHLSSIGRS 847
+FKI PMLNPDGV GN+RCSL G DLNR WL PS + PT++ K L+ + + ++
Sbjct: 260 YLVFKIAPMLNPDGVYLGNYRCSLMGFDLNRHWLDPSPWVHPTLHGVKQLIVQMYNDPKT 319
Query: 848 PVVF-CDFHGHSQKKNVFLYGCSIKETLWQAACTVGTSTILEEVNYR--TLPKILDKLAP 904
+ F D H HS N F+YG ++ EE R PK+L + A
Sbjct: 320 SLEFYIDIHAHSTMMNGFMYGNIFED---------------EERFQRQAIFPKLLCQNAE 364
Query: 905 AFTMSSCSFLVEKSRASTARVVVWREMG-----VSRSYTMESSY 943
F+ SS SF + +A T R R +G S YT+E S+
Sbjct: 365 DFSYSSTSFNRDAVKAGTGR----RFLGGLLDHTSYCYTLEVSF 404
>gi|118421091 ATP/GTP binding protein-like 5 isoform 1 [Homo
sapiens]
Length = 886
Score = 133 bits (334), Expect = 1e-30
Identities = 103/347 (29%), Positives = 159/347 (45%), Gaps = 72/347 (20%)
Query: 548 LRFFSKFESGNLRKAIQVR------------------------EFEYDLLVNADVNSTQ- 582
L F S+F+SGNL +V ++E+++ D T+
Sbjct: 8 LLFSSRFDSGNLAHVEKVESLSSDGEGVGGGASALTSGIASSPDYEFNVWTRPDCAETEF 67
Query: 583 ---HQQWFYFKVSGMQAAIPYHFNIINCEKPNSQFNYGMQPTLYSVKEALLGKPTWIRTG 639
++ WFYF V G NI+N K + ++ GM P + L +P W R
Sbjct: 68 ENGNRSWFYFSVRGGMPGKLIKINIMNMNKQSKLYSQGMAPFV----RTLPTRPRWERIR 123
Query: 640 HEICYYKNHYRQSTAVAGGASGKCYYTLTFAVTFPHSEDVC-YLAYHYPYTYTALMTHLD 698
+ + + L+F F + A+ YP++Y+ L+
Sbjct: 124 DRPTFEMTETQ--------------FVLSFVHRFVEGRGATTFFAFCYPFSYSDCQELLN 169
Query: 699 ILEK---------SVNLKEVYFRQDVLCQTLGGNPCPLVTITAMPESNSDEH--LEQF-- 745
L++ S L +Y+ +++LC +L G L+TIT+ D LEQ
Sbjct: 170 QLDQRFPENHPTHSSPLDTIYYHRELLCYSLDGLRVDLLTITSCHGLREDREPRLEQLFP 229
Query: 746 ---RHRPYQV-------ITARVHPGESNASWVMKGTLEFLVS-SDPVARLLRENFIFKII 794
RP++ +++RVHPGE+ +S+V G L+F++ DP A+ LR F+FK+I
Sbjct: 230 DTSTPRPFRFAGKRIFFLSSRVHPGETPSSFVFNGFLDFILRPDDPRAQTLRRLFVFKLI 289
Query: 795 PMLNPDGVINGNHRCSLSGEDLNRQWLSPSAHLQPTIYHAKG-LLYH 840
PMLNPDGV+ G++R G +LNRQ+L P A L P IY AK LLYH
Sbjct: 290 PMLNPDGVVRGHYRTDSRGVNLNRQYLKPDAVLHPAIYGAKAVLLYH 336
Score = 45.4 bits (106), Expect = 3e-04
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 23/103 (22%)
Query: 851 FCDFHGHSQKKNVFLYGCSIKETLWQAACTVGTSTILEEVNYRTLPKILDKLAPAFTMSS 910
+ D HGH+ K+ F+YG S + ST +E + Y PK++ + F
Sbjct: 430 YVDLHGHASKRGCFMYGNSFSD----------ESTQVENMLY---PKLISLNSAHFDFQG 476
Query: 911 CSFLVE----------KSRASTARVVVWREMGVSRSYTMESSY 943
C+F + +S+ + RV +++ G+ SYT+E +Y
Sbjct: 477 CNFSEKNMYARDRRDGQSKEGSGRVAIYKASGIIHSYTLECNY 519
>gi|78482633 ATP/GTP binding protein-like 5 isoform 3 [Homo sapiens]
Length = 717
Score = 133 bits (334), Expect = 1e-30
Identities = 103/347 (29%), Positives = 159/347 (45%), Gaps = 72/347 (20%)
Query: 548 LRFFSKFESGNLRKAIQVR------------------------EFEYDLLVNADVNSTQ- 582
L F S+F+SGNL +V ++E+++ D T+
Sbjct: 8 LLFSSRFDSGNLAHVEKVESLSSDGEGVGGGASALTSGIASSPDYEFNVWTRPDCAETEF 67
Query: 583 ---HQQWFYFKVSGMQAAIPYHFNIINCEKPNSQFNYGMQPTLYSVKEALLGKPTWIRTG 639
++ WFYF V G NI+N K + ++ GM P + L +P W R
Sbjct: 68 ENGNRSWFYFSVRGGMPGKLIKINIMNMNKQSKLYSQGMAPFV----RTLPTRPRWERIR 123
Query: 640 HEICYYKNHYRQSTAVAGGASGKCYYTLTFAVTFPHSEDVC-YLAYHYPYTYTALMTHLD 698
+ + + L+F F + A+ YP++Y+ L+
Sbjct: 124 DRPTFEMTETQ--------------FVLSFVHRFVEGRGATTFFAFCYPFSYSDCQELLN 169
Query: 699 ILEK---------SVNLKEVYFRQDVLCQTLGGNPCPLVTITAMPESNSDEH--LEQF-- 745
L++ S L +Y+ +++LC +L G L+TIT+ D LEQ
Sbjct: 170 QLDQRFPENHPTHSSPLDTIYYHRELLCYSLDGLRVDLLTITSCHGLREDREPRLEQLFP 229
Query: 746 ---RHRPYQV-------ITARVHPGESNASWVMKGTLEFLVS-SDPVARLLRENFIFKII 794
RP++ +++RVHPGE+ +S+V G L+F++ DP A+ LR F+FK+I
Sbjct: 230 DTSTPRPFRFAGKRIFFLSSRVHPGETPSSFVFNGFLDFILRPDDPRAQTLRRLFVFKLI 289
Query: 795 PMLNPDGVINGNHRCSLSGEDLNRQWLSPSAHLQPTIYHAKG-LLYH 840
PMLNPDGV+ G++R G +LNRQ+L P A L P IY AK LLYH
Sbjct: 290 PMLNPDGVVRGHYRTDSRGVNLNRQYLKPDAVLHPAIYGAKAVLLYH 336
Score = 45.4 bits (106), Expect = 3e-04
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 23/103 (22%)
Query: 851 FCDFHGHSQKKNVFLYGCSIKETLWQAACTVGTSTILEEVNYRTLPKILDKLAPAFTMSS 910
+ D HGH+ K+ F+YG S + ST +E + Y PK++ + F
Sbjct: 430 YVDLHGHASKRGCFMYGNSFSD----------ESTQVENMLY---PKLISLNSAHFDFQG 476
Query: 911 CSFLVE----------KSRASTARVVVWREMGVSRSYTMESSY 943
C+F + +S+ + RV +++ G+ SYT+E +Y
Sbjct: 477 CNFSEKNMYARDRRDGQSKEGSGRVAIYKASGIIHSYTLECNY 519
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 40.8 bits (94), Expect = 0.007
Identities = 31/126 (24%), Positives = 62/126 (49%), Gaps = 15/126 (11%)
Query: 245 TTEPPHDLPEEDFEDDGDDEVDKDSDTEDGKVEDDDLETDVNKLSSKPGLDRPEEELMQY 304
+TE + EE+ E+D DD+ DSD D + E+DD +T +++ S K D EEE +
Sbjct: 1047 STEEEEEAEEEEEEEDDDDD---DSDDRD-ESENDDEDTALSEASEKDEGDSDEEETVSI 1102
Query: 305 EVMCLELSYSFEELQSKLGDDLNSEKTQY-ANHHHIPAAASSKQHCYSKDQSSCGQEREY 363
E + S E +SE +++ ++ P+++ ++ ++++ +E E
Sbjct: 1103 VTSKAEATSSSE----------SSESSEFESSSESSPSSSEDEEEVVAREEEEEEEEEEM 1152
Query: 364 AVQTSL 369
+ S+
Sbjct: 1153 VAEESM 1158
>gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens]
Length = 1759
Score = 40.4 bits (93), Expect = 0.009
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 251 DLPEEDFEDDGDDEVDKDSDTEDGKVEDDDLETDVNKLSSKP 292
+LPEE+ EDD D++ D+D D ED +DDD + + S P
Sbjct: 1683 ELPEEEAEDDEDEDDDEDDDDEDDDEDDDDEDLRTDSEESLP 1724
Score = 32.7 bits (73), Expect = 1.9
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 247 EPPHDLPEEDFEDDGDDEVDKDSDTEDGKVEDDDLETD 284
E P + E+D ++D D++ D + D ED +D+DL TD
Sbjct: 1683 ELPEEEAEDDEDEDDDEDDDDEDDDEDD--DDEDLRTD 1718
Score = 31.6 bits (70), Expect = 4.2
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 247 EPPHDLPEEDFEDDGDDEVDKDSDTEDGKVEDDD 280
E D E+D EDD D++ D+D D ED + + ++
Sbjct: 1688 EAEDDEDEDDDEDDDDEDDDEDDDDEDLRTDSEE 1721
>gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens]
Length = 1390
Score = 37.7 bits (86), Expect = 0.058
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 245 TTEPPHDLPEEDFEDDGDDEVDKDSDTEDGKVEDDDLETD 284
+ E + +++ EDDG+DE D+D D +D +DDD E D
Sbjct: 241 SVESSEEGEDQEHEDDGEDEDDEDDDDDDDDDDDDDDEDD 280
Score = 32.3 bits (72), Expect = 2.4
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 254 EEDFEDDGDDEVDKDSDTEDGKVEDDDLE 282
E+D +DD DD+ D D D ED + E+D E
Sbjct: 260 EDDEDDDDDDDDDDDDDDEDDEDEEDGEE 288
Score = 32.0 bits (71), Expect = 3.2
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 247 EPPHDLPEEDFEDDGDDEVDKDSDTEDGKVEDDDLETDVNK 287
E D +ED EDD DD+ D D D ++ +++D E + K
Sbjct: 252 EHEDDGEDEDDEDDDDDDDDDDDDDDEDDEDEEDGEEENQK 292
Score = 31.6 bits (70), Expect = 4.2
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 245 TTEPPHDLPEEDFEDDGDDEVDKDSDTEDGKVEDDDLETD 284
++E D ED +D DDE D D D +D +D+D E +
Sbjct: 244 SSEEGEDQEHEDDGEDEDDEDDDDDDDDDDDDDDEDDEDE 283
>gi|62750349 histone deacetylase 5 isoform 3 [Homo sapiens]
Length = 1123
Score = 36.6 bits (83), Expect = 0.13
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query: 224 TSPLPLVTASSAYAFPVPGCITTEPPH-DLPEEDFEDDGDDEVD----KDSDTEDGKVED 278
T ++ A P G +E DL EED EDDG++E D KD + E G E
Sbjct: 558 TEQQEVLLGEGALTMPREGSTESESTQEDLEEEDEEDDGEEEEDCIQVKDEEGESGAEEG 617
Query: 279 DDLE 282
DLE
Sbjct: 618 PDLE 621
>gi|62750347 histone deacetylase 5 isoform 1 [Homo sapiens]
Length = 1122
Score = 36.6 bits (83), Expect = 0.13
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query: 224 TSPLPLVTASSAYAFPVPGCITTEPPH-DLPEEDFEDDGDDEVD----KDSDTEDGKVED 278
T ++ A P G +E DL EED EDDG++E D KD + E G E
Sbjct: 557 TEQQEVLLGEGALTMPREGSTESESTQEDLEEEDEEDDGEEEEDCIQVKDEEGESGAEEG 616
Query: 279 DDLE 282
DLE
Sbjct: 617 PDLE 620
>gi|221136848 neuroblastoma breakpoint family, member 6 isoform 2
[Homo sapiens]
Length = 638
Score = 36.2 bits (82), Expect = 0.17
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Query: 250 HDLPEEDFEDDGDDEVDKDSDTEDGKVEDDDLETDVNKLSSKPGLDRPEEELMQYEVMCL 309
H L E+ ED+ +DE DKD + E KV++ +V K K + P++ L + V C
Sbjct: 160 HKLSPENDEDEDEDEDDKDEEVE--KVQESPAPREVQKTEEK---EVPQDSLEECAVTC- 213
Query: 310 ELSYSFEELQSKLGDDLNSEKTQYANHHHIPAAASSKQHCYSKDQSS 356
S S S K + H A +H + +++ +
Sbjct: 214 ----SNSHNPSNSNQPHRSTKITFKEHEVDSALVVESEHPHDEEEEA 256
>gi|221136844 neuroblastoma breakpoint family, member 6 isoform 1
[Homo sapiens]
Length = 667
Score = 36.2 bits (82), Expect = 0.17
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Query: 250 HDLPEEDFEDDGDDEVDKDSDTEDGKVEDDDLETDVNKLSSKPGLDRPEEELMQYEVMCL 309
H L E+ ED+ +DE DKD + E KV++ +V K K + P++ L + V C
Sbjct: 160 HKLSPENDEDEDEDEDDKDEEVE--KVQESPAPREVQKTEEK---EVPQDSLEECAVTC- 213
Query: 310 ELSYSFEELQSKLGDDLNSEKTQYANHHHIPAAASSKQHCYSKDQSS 356
S S S K + H A +H + +++ +
Sbjct: 214 ----SNSHNPSNSNQPHRSTKITFKEHEVDSALVVESEHPHDEEEEA 256
>gi|55956788 nucleolin [Homo sapiens]
Length = 710
Score = 36.2 bits (82), Expect = 0.17
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 228 PLVTASSAYAFPVPGCITTEPPHDLPEEDFEDDGDDEVDKDSDTEDGKVEDDDLETDVNK 287
P +A PV E + +++ EDD DDE D+D D ED + E+++ E +
Sbjct: 215 PAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDDDEDDEEEEEEEEEE--P 272
Query: 288 LSSKPGLDRPE 298
+ PG + E
Sbjct: 273 VKEAPGKRKKE 283
>gi|221218991 neuroblastoma breakpoint family, member 4 [Homo
sapiens]
Length = 638
Score = 36.2 bits (82), Expect = 0.17
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Query: 250 HDLPEEDFEDDGDDEVDKDSDTEDGKVEDDDLETDVNKLSSKPGLDRPEEELMQYEVMCL 309
H L E+ ED+ +DE DKD + E KV++ +V K K + P++ L + V C
Sbjct: 160 HKLSPENDEDEDEDEDDKDEEVE--KVQESPAPREVQKTEEK---EVPQDSLEECAVTC- 213
Query: 310 ELSYSFEELQSKLGDDLNSEKTQYANHHHIPAAASSKQHCYSKDQSS 356
S S S K + H A +H + +++ +
Sbjct: 214 ----SNSHNPSNSNQPHRSTKITFKEHEVDSALVVESEHPHDEEEEA 256
>gi|239756451 PREDICTED: hypothetical protein XP_002344991 [Homo
sapiens]
Length = 197
Score = 35.8 bits (81), Expect = 0.22
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 12/68 (17%)
Query: 225 SPLPLVTASSAYAFPVP-GCI-TTEPPHDL---PEEDFEDDGDDEVDKDSDTEDGKVEDD 279
+P PLV +S + F GC EP L PEE+ +DD DDE E+ ++EDD
Sbjct: 98 TPFPLVLSSLPHLFSATSGCTGRLEPSESLELEPEEEEDDDDDDE-------EEEELEDD 150
Query: 280 DLETDVNK 287
D E ++ +
Sbjct: 151 DDEEELRR 158
>gi|239745387 PREDICTED: hypothetical protein XP_002343486 [Homo
sapiens]
Length = 197
Score = 35.8 bits (81), Expect = 0.22
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 12/68 (17%)
Query: 225 SPLPLVTASSAYAFPVP-GCI-TTEPPHDL---PEEDFEDDGDDEVDKDSDTEDGKVEDD 279
+P PLV +S + F GC EP L PEE+ +DD DDE E+ ++EDD
Sbjct: 98 TPFPLVLSSLPHLFSATSGCTGRLEPSESLELEPEEEEDDDDDDE-------EEEELEDD 150
Query: 280 DLETDVNK 287
D E ++ +
Sbjct: 151 DDEEELRR 158
>gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member B [Homo sapiens]
Length = 251
Score = 35.4 bits (80), Expect = 0.29
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 247 EPPHDLPEEDFEDDGDDEVDKDSDTEDGKVEDDDLETDVNKLSSKPGLDRPEEE 300
E D +ED ED ++E D++ D ED VE D+ + +V++ + GLD +E+
Sbjct: 172 EEGEDEEDEDDEDGEEEEFDEEDD-EDEDVEGDEDDDEVSEEEEEFGLDEEDED 224
>gi|42476101 TFIIA alpha, p55 isoform 2 [Homo sapiens]
Length = 337
Score = 34.7 bits (78), Expect = 0.49
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 254 EEDFEDDGDDEVDKDSDTEDGKVEDDDL--ETDVNKLSSKPGLDRPEEELMQYE 305
EED++DD +++ +KD EDG+VE++ L E DV+ + D + QY+
Sbjct: 249 EEDYDDDEEEDKEKDG-AEDGQVEEEPLNSEDDVSDEEGQELFDTENVVVCQYD 301
>gi|7706735 TFIIA alpha, p55 isoform 1 [Homo sapiens]
Length = 376
Score = 34.7 bits (78), Expect = 0.49
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 254 EEDFEDDGDDEVDKDSDTEDGKVEDDDL--ETDVNKLSSKPGLDRPEEELMQYE 305
EED++DD +++ +KD EDG+VE++ L E DV+ + D + QY+
Sbjct: 288 EEDYDDDEEEDKEKDG-AEDGQVEEEPLNSEDDVSDEEGQELFDTENVVVCQYD 340
>gi|187960109 RNA binding motif protein 28 [Homo sapiens]
Length = 759
Score = 34.7 bits (78), Expect = 0.49
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 254 EEDFEDDGDDEVDKDSDTEDGKVEDDDLETD 284
EED E++ +D+ D D D EDG +D+D E +
Sbjct: 225 EEDMEEEENDDDDDDDDEEDGVFDDEDEEEE 255
Score = 32.7 bits (73), Expect = 1.9
Identities = 13/37 (35%), Positives = 25/37 (67%)
Query: 251 DLPEEDFEDDGDDEVDKDSDTEDGKVEDDDLETDVNK 287
D+ EE+ +DD DD+ ++D +D E++++E+ V K
Sbjct: 227 DMEEEENDDDDDDDDEEDGVFDDEDEEEENIESKVTK 263
>gi|86262149 zinc finger and BTB domain containing 7C [Homo sapiens]
Length = 619
Score = 34.7 bits (78), Expect = 0.49
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 247 EPPHDLPEEDFEDDGDDEVDKD--SDTEDGKVEDDDLETDVNKLSSKPGLDRPEE 299
EP D EED ++D DD+ D D D E+ + E++D + D + + L P++
Sbjct: 128 EPGGDGGEEDDKEDDDDDEDDDDEEDEEEEEEEEEDDDDDTEDFADQENLPDPQD 182
>gi|239756368 PREDICTED: similar to acidic (leucine-rich) nuclear
phosphoprotein 32 family, member B [Homo sapiens]
Length = 272
Score = 34.3 bits (77), Expect = 0.64
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 247 EPPHDLPEEDFEDDGDDEVDKDSDTEDGKVEDDDLETDVNKLSSKPGLDRPEEE 300
E D + + ED ++E+D++ D ED VE DD + +V++ + GLD+ E++
Sbjct: 192 EEGEDEKDXENEDGEEEELDEEED-EDEDVEGDDDKDEVSEEEEEFGLDKDEDD 244
>gi|239750893 PREDICTED: similar to acidic (leucine-rich) nuclear
phosphoprotein 32 family, member B [Homo sapiens]
Length = 272
Score = 34.3 bits (77), Expect = 0.64
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 247 EPPHDLPEEDFEDDGDDEVDKDSDTEDGKVEDDDLETDVNKLSSKPGLDRPEEE 300
E D + + ED ++E+D++ D ED VE DD + +V++ + GLD+ E++
Sbjct: 192 EEGEDEKDXENEDGEEEELDEEED-EDEDVEGDDDKDEVSEEEEEFGLDKDEDD 244
>gi|31543091 MAK16 homolog [Homo sapiens]
Length = 300
Score = 33.5 bits (75), Expect = 1.1
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 251 DLPEEDFEDDGDDEVDKDSDTEDGKVEDDDLE--TDVNKLSSKPGLDR 296
D E+D +DD +++V K EDG+V++ D+ D++KL + D+
Sbjct: 201 DTEEKDDDDDDEEDVGKREFVEDGEVDESDISDFEDMDKLDASSDEDQ 248
Score = 30.4 bits (67), Expect = 9.3
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 8/85 (9%)
Query: 252 LPEEDFEDDGDDEVDKDSDTEDGKVEDDDLETDVNKLSSKPGLDRPEEELMQYEVMCLEL 311
L +++ E D D +KD +DDD E DV K + E ++ +E M
Sbjct: 190 LEQQEAESDSSDTEEKD--------DDDDDEEDVGKREFVEDGEVDESDISDFEDMDKLD 241
Query: 312 SYSFEELQSKLGDDLNSEKTQYANH 336
+ S E+ K + EK A H
Sbjct: 242 ASSDEDQDGKSSSEEEEEKALSAKH 266
>gi|30061491 erythrocyte membrane protein band 4.1-like 1 isoform b
[Homo sapiens]
Length = 779
Score = 33.5 bits (75), Expect = 1.1
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 259 DDGDDEVDKDSDTEDGKVEDDDLETDVN---KLSSKPGLDRPEEELMQYEVMCLELSYSF 315
D G D +D D E G + E +V K+ LD+PE+ L++++ EL +
Sbjct: 385 DAGPDGDKRDEDGESGGQRSEAEEGEVRTPTKIKELKFLDKPEDVLLKHQASINELKRTL 444
Query: 316 EELQSKL 322
+E SKL
Sbjct: 445 KEPNSKL 451
>gi|60498973 myelin transcription factor 1-like [Homo sapiens]
Length = 1184
Score = 33.5 bits (75), Expect = 1.1
Identities = 24/95 (25%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 247 EPPHDLPEEDFEDDGDDEVDKDSDTEDGKVEDDDLETDVNKLSSKPGLDRPEEELMQYEV 306
+ P D EED E D ++E + + + ED + +D+E D + + + EEE +++
Sbjct: 115 DEPGDEDEEDEEGDREEEEEIEEEDEDDDEDGEDVE-DEEEEEEEEEEEEEEEENEDHQM 173
Query: 307 MCLELSYSFEELQSKLGDDLNSEKTQYANHHHIPA 341
C ++ +Q DD N++ +Y N+ + A
Sbjct: 174 NC----HNTRIMQDTEKDDNNND--EYDNYDELVA 202
>gi|4502131 amyloid beta A4 precursor protein-binding, family B,
member 1 isoform E9 [Homo sapiens]
Length = 710
Score = 33.1 bits (74), Expect = 1.4
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 254 EEDFEDDGDDEVDKDSDTEDGKVEDDDLETDVNKLSSKPGLDRPEEEL 301
+E D+G+++ +++ E+ EDDD E + LSS PGL P E +
Sbjct: 142 QEQGPDEGEEKAAGEAEEEE---EDDDDEEEEEDLSSPPGLPEPLESV 186
>gi|22035554 amyloid beta A4 precursor protein-binding, family B,
member 1 isoform delta E9 [Homo sapiens]
Length = 708
Score = 33.1 bits (74), Expect = 1.4
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 254 EEDFEDDGDDEVDKDSDTEDGKVEDDDLETDVNKLSSKPGLDRPEEEL 301
+E D+G+++ +++ E+ EDDD E + LSS PGL P E +
Sbjct: 142 QEQGPDEGEEKAAGEAEEEE---EDDDDEEEEEDLSSPPGLPEPLESV 186
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.134 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,192,392
Number of Sequences: 37866
Number of extensions: 1874504
Number of successful extensions: 7355
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 63
Number of HSP's that attempted gapping in prelim test: 6494
Number of HSP's gapped (non-prelim): 608
length of query: 1066
length of database: 18,247,518
effective HSP length: 113
effective length of query: 953
effective length of database: 13,968,660
effective search space: 13312132980
effective search space used: 13312132980
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.