Guide to the Human Genome
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Name: AGBL5 Sequence: fasta or formatted (886aa) NCBI GI: 118421091
Description:

ATP/GTP binding protein-like 5 isoform 1

Referenced in:

Carboxypeptidases

Other entries for this name:
alt prot [717aa] ATP/GTP binding protein-like 5 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         53           2
 C cysteine            2.4         21           1
 D aspartate           3.7         33           2
 E glutamate           5.0         44           2
 F phenylalanine       4.5         40           2
 G glycine             7.8         69           3
 H histidine           3.0         27           2
 I isoleucine          2.7         24           2
 K lysine              3.4         30           2
 L leucine             8.7         77           2
 M methionine          2.0         18           1
 N asparagine          4.5         40           2
 P proline             9.3         82           5
 Q glutamine           3.6         32           3
 R arginine            8.1         72           3
 S serine             12.4        110           4
 T threonine           4.7         42           2
 V valine              4.7         42           2
 W tryptophan          0.9          8           1
 Y tyrosine            2.5         22           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ATP/GTP binding protein-like 5 isoform 1 
AGBL5                 0.783   ATP/GTP binding protein-like 5 isoform 3 
AGBL4                 0.081   ATP/GTP binding protein-like 4 
AGTPBP1               0.068   ATP/GTP binding protein 1 
AGBL3                 0.064   carboxypeptidase 3, cytosolic 
AGBL2                 0.062   carboxypeptidase 2, cytosolic 
AGBL1                 0.060   ATP/GTP binding protein-like 1 
SRRM2                 0.013   splicing coactivator subunit SRm300 
COL27A1               0.011   collagen, type XXVII, alpha 1 
LOC100292088          0.011   PREDICTED: hypothetical protein XP_002346321 
FLJ22184              0.011   PREDICTED: hypothetical protein LOC80164 
KIAA0284              0.011   hypothetical protein LOC283638 isoform 2 
KIAA0284              0.011   hypothetical protein LOC283638 isoform 1 
ARID1A                0.010   AT rich interactive domain 1A isoform a 
ARID1A                0.010   AT rich interactive domain 1A isoform b 
DACT3                 0.010   thymus expressed gene 3-like 
LOC100133756          0.009   PREDICTED: hypothetical protein, partial 
SALL3                 0.009   sal-like 3 
ZNF828                0.009   zinc finger protein 828 
MICALL1               0.009   molecule interacting with Rab13 
TNRC18                0.009   trinucleotide repeat containing 18 
FLJ22184              0.009   PREDICTED: hypothetical protein FLJ22184 
KIAA1522              0.009   hypothetical protein LOC57648 
NACA                  0.009   nascent polypeptide-associated complex alpha subuni...
CPSF6                 0.009   cleavage and polyadenylation specific factor 6, 68 ...
KDM6B                 0.009   lysine (K)-specific demethylase 6B 
TSC22D2               0.008   TSC22 domain family, member 2 
APC2                  0.008   adenomatosis polyposis coli 2 
ZC3H18                0.008   zinc finger CCCH-type containing 18 
LOC284297             0.008   hypothetical protein LOC284297 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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