Guide to the Human Genome
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Name: AGBL3 Sequence: fasta or formatted (920aa) NCBI GI: 222352158
Description:

carboxypeptidase 3, cytosolic

Referenced in:

Carboxypeptidases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.3         30           1
 C cysteine            2.1         19           1
 D aspartate           6.3         58           2
 E glutamate           5.9         54           2
 F phenylalanine       4.2         39           2
 G glycine             4.5         41           2
 H histidine           3.3         30           2
 I isoleucine          4.3         40           1
 K lysine              7.6         70           2
 L leucine             8.4         77           2
 M methionine          2.4         22           1
 N asparagine          5.1         47           2
 P proline             4.9         45           1
 Q glutamine           4.7         43           2
 R arginine            6.1         56           2
 S serine              8.7         80           3
 T threonine           6.8         63           2
 V valine              5.0         46           2
 W tryptophan          1.5         14           1
 Y tyrosine            5.0         46           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   carboxypeptidase 3, cytosolic 
AGBL2                 0.360   carboxypeptidase 2, cytosolic 
AGTPBP1               0.175   ATP/GTP binding protein 1 
AGBL1                 0.165   ATP/GTP binding protein-like 1 
AGBL4                 0.114   ATP/GTP binding protein-like 4 
AGBL5                 0.062   ATP/GTP binding protein-like 5 isoform 1 
AGBL5                 0.062   ATP/GTP binding protein-like 5 isoform 3 
ANK3                  0.006   ankyrin 3 isoform 1 
CUL4B                 0.004   cullin 4B isoform 2 
CUL4B                 0.004   cullin 4B isoform 1 
CWC22                 0.004   CWC22 spliceosome-associated protein homolog 
ROCK1                 0.004   Rho-associated, coiled-coil containing protein kinase...
OR5L2                 0.004   olfactory receptor, family 5, subfamily L, member 2 ...
HS6ST2                0.004   heparan sulfate 6-O-sulfotransferase 2 isoform L [H...
HS6ST2                0.004   heparan sulfate 6-O-sulfotransferase 2 isoform S [H...
LOC647169             0.004   PREDICTED: similar to glutathione S-transferase alp...
LOC647169             0.004   PREDICTED: similar to glutathione S-transferase alp...
LOC647169             0.004   PREDICTED: similar to glutathione S-transferase alp...
METTL13               0.004   CGI-01 protein isoform 1 
METTL13               0.004   CGI-01 protein isoform 2 
METTL13               0.004   CGI-01 protein isoform 3 
XIRP2                 0.004   xin actin-binding repeat containing 2 isoform 1 [Ho...
RERE                  0.003   atrophin-1 like protein isoform b 
RERE                  0.003   atrophin-1 like protein isoform a 
RERE                  0.003   atrophin-1 like protein isoform a 
CNGA2                 0.003   cyclic nucleotide gated channel alpha 2 
WDR60                 0.003   WD repeat domain 60 
RBBP6                 0.003   retinoblastoma-binding protein 6 isoform 2 
RBBP6                 0.003   retinoblastoma-binding protein 6 isoform 1 
SMAD2                 0.003   Sma- and Mad-related protein 2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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