GTF2A1 27911

Name: GTF2A1	Sequence: fasta or formatted (337aa)		NCBI GI: 42476101
Description: TFIIA alpha, p55 isoform 2		Referenced in: RNA Polymerase and General Transcription Factors Small RNAs in RNA Processing
Other entries for this name: alt prot [376aa] TFIIA alpha, p55 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.9 30 3 C cysteine 0.3 1 1 D aspartate 6.2 21 3 E glutamate 7.1 24 3 F phenylalanine 1.8 6 1 G glycine 5.6 19 2 H histidine 3.6 12 7 I isoleucine 5.0 17 2 K lysine 3.6 12 1 L leucine 6.8 23 3 M methionine 1.8 6 1 N asparagine 3.3 11 1 P proline 6.8 23 1 Q glutamine 17.8 60 4 R arginine 1.2 4 1 S serine 4.5 15 2 T threonine 5.9 20 2 V valine 7.7 26 3 W tryptophan 0.9 3 1 Y tyrosine 1.2 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 TFIIA alpha, p55 isoform 2 GTF2A1 1.000 TFIIA alpha, p55 isoform 1 STON1-GTF2A1L 0.169 STON1-GTF2A1L protein GTF2A1L 0.169 general transcription factor IIA, 1-like isoform 1 [... GTF2A1L 0.071 general transcription factor IIA, 1-like isoform 2 [... ZNF853 0.054 zinc finger protein 853 EP400 0.045 E1A binding protein p400 PELP1 0.043 proline, glutamic acid and leucine rich protein 1 [... AMOT 0.043 angiomotin isoform 1 MYT1 0.043 myelin transcription factor 1 MYT1L 0.043 myelin transcription factor 1-like PRDM2 0.041 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.041 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.041 retinoblastoma protein-binding zinc finger protein i... ARID2 0.041 AT rich interactive domain 2 (ARID, RFX-like) MED15 0.040 mediator complex subunit 15 isoform b TBP 0.038 TATA box binding protein BMP2K 0.038 BMP-2 inducible kinase isoform a BMP2K 0.038 BMP-2 inducible kinase isoform b MED15 0.038 mediator complex subunit 15 isoform a FOXP2 0.037 forkhead box P2 isoform I FOXP2 0.037 forkhead box P2 isoform III FOXP2 0.037 forkhead box P2 isoform II NCL 0.037 nucleolin HUWE1 0.037 HECT, UBA and WWE domain containing 1 CENPB 0.035 centromere protein B NRD1 0.035 nardilysin isoform b NRD1 0.035 nardilysin isoform a PHC1 0.035 polyhomeotic 1-like POU6F2 0.034 POU domain, class 6, transcription factor 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.