APBB1 14003

Name: APBB1	Sequence: fasta or formatted (708aa)		NCBI GI: 22035554
Description: amyloid beta A4 precursor protein-binding, family B, member 1 isoform delta E9		Referenced in: Additional Brain Proteins WW Domain
Other entries for this name: alt prot [710aa] amyloid beta A4 precursor protein-binding, family B, member 1 iso...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.7 69 2 C cysteine 1.8 13 2 D aspartate 4.2 30 4 E glutamate 9.5 67 5 F phenylalanine 2.7 19 1 G glycine 7.6 54 3 H histidine 2.8 20 1 I isoleucine 2.3 16 2 K lysine 3.5 25 1 L leucine 9.9 70 3 M methionine 1.8 13 1 N asparagine 3.7 26 2 P proline 8.3 59 2 Q glutamine 4.8 34 2 R arginine 4.9 35 2 S serine 9.3 66 4 T threonine 4.4 31 2 V valine 5.2 37 1 W tryptophan 2.1 15 1 Y tyrosine 1.3 9 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 amyloid beta A4 precursor protein-binding, family B,... APBB1 0.996 amyloid beta A4 precursor protein-binding, family B, ... APBB2 0.386 amyloid beta A4 precursor protein-binding, family B,... APBB3 0.220 amyloid beta precursor protein-binding, family B, me... APBB3 0.216 amyloid beta precursor protein-binding, family B, me... APBB3 0.215 amyloid beta precursor protein-binding, family B, me... APBB3 0.214 amyloid beta precursor protein-binding, family B, me... SETD1B 0.019 SET domain containing 1B SETD1A 0.018 SET domain containing 1A MICAL3 0.017 microtubule associated monoxygenase, calponin and L... CHIC1 0.014 cysteine-rich hydrophobic domain 1 PTMS 0.013 parathymosin MYST4 0.013 MYST histone acetyltransferase (monocytic leukemia)... HIVEP3 0.013 human immunodeficiency virus type I enhancer bindin... HIVEP3 0.013 human immunodeficiency virus type I enhancer bindin... LOC100290519 0.013 PREDICTED: hypothetical protein XP_002346939 PRDM16 0.013 PR domain containing 16 isoform 2 PRDM16 0.013 PR domain containing 16 isoform 1 SETD2 0.013 SET domain containing 2 PELP1 0.012 proline, glutamic acid and leucine rich protein 1 [... BRD2 0.012 bromodomain containing 2 BRD2 0.012 bromodomain containing 2 HECW1 0.012 NEDD4-like ubiquitin-protein ligase 1 SLC24A1 0.012 solute carrier family 24 (sodium/potassium/calcium ex... ZBTB7C 0.012 zinc finger and BTB domain containing 7C MYT1 0.012 myelin transcription factor 1 RTN1 0.012 reticulon 1 isoform A PRKCSH 0.011 protein kinase C substrate 80K-H isoform 1 SRCAP 0.011 Snf2-related CBP activator protein HMGB2 0.011 high-mobility group box 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.