SMPDL3A 23687

Name: SMPDL3A	Sequence: fasta or formatted (453aa)		NCBI GI: 24307911
Description: acid sphingomyelinase-like phosphodiesterase 3A		Referenced in: Sphingomyelin, Ceramides, and Glycolipids
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 26 1 C cysteine 2.0 9 2 D aspartate 6.0 27 2 E glutamate 3.3 15 2 F phenylalanine 4.0 18 2 G glycine 4.6 21 2 H histidine 2.4 11 1 I isoleucine 6.4 29 2 K lysine 5.7 26 2 L leucine 10.2 46 2 M methionine 1.8 8 1 N asparagine 6.8 31 2 P proline 6.4 29 3 Q glutamine 5.1 23 2 R arginine 2.0 9 1 S serine 7.1 32 2 T threonine 6.6 30 3 V valine 6.2 28 2 W tryptophan 1.8 8 1 Y tyrosine 6.0 27 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 acid sphingomyelinase-like phosphodiesterase 3A [Hom... SMPDL3B 0.363 acid sphingomyelinase-like phosphodiesterase 3B isof... SMPDL3B 0.294 acid sphingomyelinase-like phosphodiesterase 3B isof... SMPD1 0.166 sphingomyelin phosphodiesterase 1, acid lysosomal is... SMPD1 0.109 sphingomyelin phosphodiesterase 1, acid lysosomal is... C17orf48 0.016 ADP-ribose/CDP-alcohol pyrophosphatase PTPRD 0.009 protein tyrosine phosphatase, receptor type, D isof... PTPRD 0.009 protein tyrosine phosphatase, receptor type, D isofor... PTPRD 0.009 protein tyrosine phosphatase, receptor type, D isofo... PTPRD 0.009 protein tyrosine phosphatase, receptor type, D isofo... PTPRD 0.009 protein tyrosine phosphatase, receptor type, D isofo... PCSK6 0.008 paired basic amino acid cleaving system 4 isoform e ... PCSK6 0.008 paired basic amino acid cleaving system 4 isoform c ... PCSK6 0.008 paired basic amino acid cleaving system 4 isoform f ... PCSK6 0.008 paired basic amino acid cleaving system 4 isoform d ... PCSK6 0.008 paired basic amino acid cleaving system 4 isoform h ... PCSK6 0.008 paired basic amino acid cleaving system 4 isoform g ... PCSK6 0.008 paired basic amino acid cleaving system 4 isoform a p... PCSK6 0.008 paired basic amino acid cleaving system 4 isoform b ... CPO 0.008 carboxypeptidase O KIAA1731 0.007 hypothetical protein LOC85459 CDKAL1 0.007 CDK5 regulatory subunit associated protein 1-like 1 ... B3GALTL 0.005 beta 1,3-galactosyltransferase-like GNAQ 0.005 guanine nucleotide binding protein (G protein), q po... PTPRF 0.005 protein tyrosine phosphatase, receptor type, F isof... PTPRF 0.005 protein tyrosine phosphatase, receptor type, F isof... GMPPB 0.005 GDP-mannose pyrophosphorylase B isoform 1 GMPPB 0.005 GDP-mannose pyrophosphorylase B isoform 2 OR6Q1 0.005 olfactory receptor, family 6, subfamily Q, member 1... AKAP6 0.004 A-kinase anchor protein 6 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.