Guide to the Human Genome
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Name: PTPRD Sequence: fasta or formatted (1912aa) NCBI GI: 4506309
Description:

protein tyrosine phosphatase, receptor type, D isoform 1 precursor

Referenced in:

Gene Structure
Protein Tyrosine Phosphatases

Other entries for this name:
alt prot [1502aa] protein tyrosine phosphatase, receptor type, D isoform 5 precursor
alt prot [1899aa] protein tyrosine phosphatase, receptor type, D isoform 2 precursor
alt prot [1903aa] protein tyrosine phosphatase, receptor type, D isoform 3 precursor
alt prot [1501aa] protein tyrosine phosphatase, receptor type, D isoform 4 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6        108           2
 C cysteine            0.9         18           1
 D aspartate           4.8         91           2
 E glutamate           7.1        135           3
 F phenylalanine       3.3         63           2
 G glycine             6.3        121           2
 H histidine           2.1         41           2
 I isoleucine          5.9        113           3
 K lysine              5.1         98           2
 L leucine             7.1        135           6
 M methionine          2.5         47           2
 N asparagine          3.8         73           3
 P proline             7.2        138           3
 Q glutamine           4.7         90           2
 R arginine            5.6        108           2
 S serine              6.9        132           2
 T threonine           7.8        149           2
 V valine              7.9        151           2
 W tryptophan          1.3         25           1
 Y tyrosine            4.0         76           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein tyrosine phosphatase, receptor type, D isofor... 
PTPRD                 0.992   protein tyrosine phosphatase, receptor type, D isofo...
PTPRD                 0.990   protein tyrosine phosphatase, receptor type, D isofo...
PTPRS                 0.731   protein tyrosine phosphatase, receptor type, sigma ...
PTPRS                 0.720   protein tyrosine phosphatase, receptor type, sigma ...
PTPRF                 0.696   protein tyrosine phosphatase, receptor type, F isof...
PTPRF                 0.693   protein tyrosine phosphatase, receptor type, F isof...
PTPRD                 0.486   protein tyrosine phosphatase, receptor type, D isofo...
PTPRD                 0.484   protein tyrosine phosphatase, receptor type, D isof...
PTPRS                 0.394   protein tyrosine phosphatase, receptor type, sigma ...
PTPRS                 0.394   protein tyrosine phosphatase, receptor type, sigma ...
PTPRA                 0.150   protein tyrosine phosphatase, receptor type, A isofor...
PTPRA                 0.150   protein tyrosine phosphatase, receptor type, A isofo...
PTPRA                 0.150   protein tyrosine phosphatase, receptor type, A isofo...
PTPRE                 0.138   protein tyrosine phosphatase, receptor type, E isofor...
PTPRE                 0.136   protein tyrosine phosphatase, receptor type, E isofo...
PTPRK                 0.126   protein tyrosine phosphatase, receptor type, K isofo...
PTPRK                 0.124   protein tyrosine phosphatase, receptor type, K isof...
PTPRM                 0.123   protein tyrosine phosphatase, receptor type, M isof...
PTPRM                 0.123   protein tyrosine phosphatase, receptor type, M isof...
PTPRT                 0.122   protein tyrosine phosphatase, receptor type, T isof...
PTPRT                 0.121   protein tyrosine phosphatase, receptor type, T isof...
PTPRG                 0.113   protein tyrosine phosphatase, receptor type, G prec...
PTPRU                 0.112   protein tyrosine phosphatase, receptor type, U isof...
PTPRU                 0.110   protein tyrosine phosphatase, receptor type, U isof...
PTPRU                 0.110   protein tyrosine phosphatase, receptor type, U isof...
PTPRZ1                0.104   protein tyrosine phosphatase, receptor-type, zeta1 p...
PTPRC                 0.096   protein tyrosine phosphatase, receptor type, C isofo...
PTPRC                 0.096   protein tyrosine phosphatase, receptor type, C isofo...
PTPRC                 0.096   protein tyrosine phosphatase, receptor type, C isofo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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