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Search of human proteins with 239752199
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239752199 PREDICTED: hypothetical protein XP_002348146 [Homo
sapiens]
(220 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239752199 PREDICTED: hypothetical protein XP_002348146 [Homo ... 447 e-126
gi|239746724 PREDICTED: hypothetical protein XP_002343820 [Homo ... 447 e-126
gi|239754378 PREDICTED: similar to hCG2030094 [Homo sapiens] 47 1e-05
gi|239748985 PREDICTED: similar to hCG2030094 [Homo sapiens] 47 1e-05
gi|239743005 PREDICTED: hypothetical protein XP_002342716 [Homo ... 47 1e-05
gi|27894378 chloride intracellular channel 6 [Homo sapiens] 46 3e-05
gi|239749709 PREDICTED: hypothetical protein [Homo sapiens] 43 2e-04
gi|239508698 PREDICTED: similar to mucin [Homo sapiens] 42 3e-04
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens] 42 5e-04
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens] 42 5e-04
gi|31077092 neurogenin 2 [Homo sapiens] 42 5e-04
gi|239743051 PREDICTED: hypothetical protein XP_002342747 [Homo ... 40 0.001
gi|169216514 PREDICTED: similar to paraneoplastic antigen MA2 [H... 40 0.002
gi|169216749 PREDICTED: similar to Putative paraneoplastic antig... 40 0.002
gi|116256464 hypothetical protein LOC343990 [Homo sapiens] 39 0.005
gi|239754474 PREDICTED: similar to mucin [Homo sapiens] 37 0.013
gi|226437579 NAC alpha domain containing [Homo sapiens] 37 0.017
gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens] 37 0.017
gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens] 37 0.017
gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens] 37 0.017
gi|239508792 PREDICTED: NAC alpha domain containing [Homo sapiens] 37 0.017
gi|63175652 CREBBP/EP300 inhibitor 2 [Homo sapiens] 37 0.017
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 36 0.023
gi|4502523 calcium channel, voltage-dependent, N type, alpha 1B ... 35 0.050
gi|118498339 EMI domain containing 2 [Homo sapiens] 35 0.050
gi|239755585 PREDICTED: hypothetical protein [Homo sapiens] 35 0.066
gi|169161029 PREDICTED: hypothetical protein [Homo sapiens] 35 0.066
gi|239750101 PREDICTED: hypothetical protein [Homo sapiens] 35 0.066
gi|169202233 PREDICTED: hypothetical protein [Homo sapiens] 35 0.066
gi|92859678 small nuclear RNA activating complex, polypeptide 4,... 35 0.066
>gi|239752199 PREDICTED: hypothetical protein XP_002348146 [Homo
sapiens]
Length = 220
Score = 447 bits (1151), Expect = e-126
Identities = 220/220 (100%), Positives = 220/220 (100%)
Query: 1 MGQGRKESSAEVVLTGGCPLGWCSAVERGQVAPLNAPQRARGIAPSLARWRPAFGERDQQ 60
MGQGRKESSAEVVLTGGCPLGWCSAVERGQVAPLNAPQRARGIAPSLARWRPAFGERDQQ
Sbjct: 1 MGQGRKESSAEVVLTGGCPLGWCSAVERGQVAPLNAPQRARGIAPSLARWRPAFGERDQQ 60
Query: 61 PPARPGVSGAAGWARGRGADATQGAAGTVAASAAARPQAAEARAEVARGERVDERVEAGV 120
PPARPGVSGAAGWARGRGADATQGAAGTVAASAAARPQAAEARAEVARGERVDERVEAGV
Sbjct: 61 PPARPGVSGAAGWARGRGADATQGAAGTVAASAAARPQAAEARAEVARGERVDERVEAGV 120
Query: 121 GEAQRAPVGQAHHSHGQQVAGSEGGHVQGAAARVLPGGHAELQRAVAHGAVVAEVGRREE 180
GEAQRAPVGQAHHSHGQQVAGSEGGHVQGAAARVLPGGHAELQRAVAHGAVVAEVGRREE
Sbjct: 121 GEAQRAPVGQAHHSHGQQVAGSEGGHVQGAAARVLPGGHAELQRAVAHGAVVAEVGRREE 180
Query: 181 RRQQPHQPHCGAGVTRRAQGARAQRVPHGQRTCPRRQQPA 220
RRQQPHQPHCGAGVTRRAQGARAQRVPHGQRTCPRRQQPA
Sbjct: 181 RRQQPHQPHCGAGVTRRAQGARAQRVPHGQRTCPRRQQPA 220
>gi|239746724 PREDICTED: hypothetical protein XP_002343820 [Homo
sapiens]
Length = 220
Score = 447 bits (1151), Expect = e-126
Identities = 220/220 (100%), Positives = 220/220 (100%)
Query: 1 MGQGRKESSAEVVLTGGCPLGWCSAVERGQVAPLNAPQRARGIAPSLARWRPAFGERDQQ 60
MGQGRKESSAEVVLTGGCPLGWCSAVERGQVAPLNAPQRARGIAPSLARWRPAFGERDQQ
Sbjct: 1 MGQGRKESSAEVVLTGGCPLGWCSAVERGQVAPLNAPQRARGIAPSLARWRPAFGERDQQ 60
Query: 61 PPARPGVSGAAGWARGRGADATQGAAGTVAASAAARPQAAEARAEVARGERVDERVEAGV 120
PPARPGVSGAAGWARGRGADATQGAAGTVAASAAARPQAAEARAEVARGERVDERVEAGV
Sbjct: 61 PPARPGVSGAAGWARGRGADATQGAAGTVAASAAARPQAAEARAEVARGERVDERVEAGV 120
Query: 121 GEAQRAPVGQAHHSHGQQVAGSEGGHVQGAAARVLPGGHAELQRAVAHGAVVAEVGRREE 180
GEAQRAPVGQAHHSHGQQVAGSEGGHVQGAAARVLPGGHAELQRAVAHGAVVAEVGRREE
Sbjct: 121 GEAQRAPVGQAHHSHGQQVAGSEGGHVQGAAARVLPGGHAELQRAVAHGAVVAEVGRREE 180
Query: 181 RRQQPHQPHCGAGVTRRAQGARAQRVPHGQRTCPRRQQPA 220
RRQQPHQPHCGAGVTRRAQGARAQRVPHGQRTCPRRQQPA
Sbjct: 181 RRQQPHQPHCGAGVTRRAQGARAQRVPHGQRTCPRRQQPA 220
>gi|239754378 PREDICTED: similar to hCG2030094 [Homo sapiens]
Length = 282
Score = 47.0 bits (110), Expect = 1e-05
Identities = 47/138 (34%), Positives = 53/138 (38%), Gaps = 23/138 (16%)
Query: 76 GRGADATQGAAGTVAASAAARPQAAEAR-AEVARGERVDERVEAGVGEAQRAPVGQAHHS 134
GRGA QG A AA A A A + A+VA R E V A G R GQ HH
Sbjct: 107 GRGARGGQGGAVRRAAEAVAAVAAVQRELADVAAARRAVEEVAAEHGCRGRGAPGQLHHG 166
Query: 135 HGQQVAGSEGGHVQGAAARVLPGGHAELQRAVA--HGAVVAEVGRREERRQQPHQPHCGA 192
HG G+ G H A P G Q A G + A+ G R HC
Sbjct: 167 HGAARLGAAGRHALPPA----PHGRRRPQEAGTRRQGVLGADDGVR----------HCAV 212
Query: 193 GVTRRAQ------GARAQ 204
RA+ ARAQ
Sbjct: 213 AAAARARAVLLGAAARAQ 230
>gi|239748985 PREDICTED: similar to hCG2030094 [Homo sapiens]
Length = 254
Score = 47.0 bits (110), Expect = 1e-05
Identities = 47/138 (34%), Positives = 53/138 (38%), Gaps = 23/138 (16%)
Query: 76 GRGADATQGAAGTVAASAAARPQAAEAR-AEVARGERVDERVEAGVGEAQRAPVGQAHHS 134
GRGA QG A AA A A A + A+VA R E V A G R GQ HH
Sbjct: 79 GRGARGGQGGAVRRAAEAVAAVAAVQRELADVAAARRAVEEVAAEHGCRGRGAPGQLHHG 138
Query: 135 HGQQVAGSEGGHVQGAAARVLPGGHAELQRAVA--HGAVVAEVGRREERRQQPHQPHCGA 192
HG G+ G H A P G Q A G + A+ G R HC
Sbjct: 139 HGAARLGAAGRHALPPA----PHGRRRPQEAGTRRQGVLGADDGVR----------HCAV 184
Query: 193 GVTRRAQ------GARAQ 204
RA+ ARAQ
Sbjct: 185 AAAARARAVLLGAAARAQ 202
>gi|239743005 PREDICTED: hypothetical protein XP_002342716 [Homo
sapiens]
Length = 254
Score = 47.0 bits (110), Expect = 1e-05
Identities = 47/138 (34%), Positives = 53/138 (38%), Gaps = 23/138 (16%)
Query: 76 GRGADATQGAAGTVAASAAARPQAAEAR-AEVARGERVDERVEAGVGEAQRAPVGQAHHS 134
GRGA QG A AA A A A + A+VA R E V A G R GQ HH
Sbjct: 79 GRGARGGQGGAVRRAAEAVAAVAAVQRELADVAAARRAVEEVAAEHGCRGRGAPGQLHHG 138
Query: 135 HGQQVAGSEGGHVQGAAARVLPGGHAELQRAVA--HGAVVAEVGRREERRQQPHQPHCGA 192
HG G+ G H A P G Q A G + A+ G R HC
Sbjct: 139 HGAARLGAAGRHALPPA----PHGRRRPQEAGTRRQGVLGADDGVR----------HCAV 184
Query: 193 GVTRRAQ------GARAQ 204
RA+ ARAQ
Sbjct: 185 AAAARARAVLLGAAARAQ 202
>gi|27894378 chloride intracellular channel 6 [Homo sapiens]
Length = 686
Score = 45.8 bits (107), Expect = 3e-05
Identities = 44/135 (32%), Positives = 55/135 (40%), Gaps = 15/135 (11%)
Query: 64 RPGVSGAAGW-ARG----RGAD-ATQGAAGTVAASAAARPQAAEARAEVARGERVDERVE 117
RPG GAAG A G GA+ A +GAA A + EA A RG + E
Sbjct: 27 RPGEPGAAGGEAEGPEGSEGAEEAPRGAAAVKEAGGGGPDRGPEAEARGTRGAHGETEAE 86
Query: 118 AGVGEAQRAPVGQAHHSHGQQVAGSEGGHVQGAAARVLPGGHAELQRAVAHGAVVAEVGR 177
G E P G S QQV G+ G A+ P G A+ + + A R
Sbjct: 87 EGAPEGAEVPQGGEETSGAQQVEGAS----PGRGAQGEPRGEAQREPEDS-----AAPER 137
Query: 178 REERRQQPHQPHCGA 192
+EE Q+P P A
Sbjct: 138 QEEAEQRPEVPEGSA 152
Score = 27.7 bits (60), Expect = 8.0
Identities = 30/130 (23%), Positives = 45/130 (34%), Gaps = 3/130 (2%)
Query: 66 GVSGAAGWARGRGADATQGAAGTVAASAAARPQAAEARAEVARGERVDERVEAGVGEAQR 125
G +G + A GR D+ + A P +AE G+ VD G
Sbjct: 174 GPAGDSVEAEGRVGDSVDAEGPAGDSVDAEGPLGDNIQAEGPAGDSVDAEGRVGDSVDAE 233
Query: 126 APVGQAHHSHGQQVAGSEGGHVQGAAARV-LPGGHAELQRAVAHGAVVAE--VGRREERR 182
P G + + G+ E G G +P G + A ++ AE GR
Sbjct: 234 GPAGDSVDAEGRVGDSVEAGDPAGDGVEAGVPAGDSVEAEGPAGDSMDAEGPAGRARRVS 293
Query: 183 QQPHQPHCGA 192
+P Q G+
Sbjct: 294 GEPQQSGDGS 303
>gi|239749709 PREDICTED: hypothetical protein [Homo sapiens]
Length = 178
Score = 43.1 bits (100), Expect = 2e-04
Identities = 55/190 (28%), Positives = 64/190 (33%), Gaps = 54/190 (28%)
Query: 55 GERDQQPPARP----GVSGAAGWARGRGADATQG----------AAGTVAASAAARPQAA 100
GE P R G SG A RGRG G A G A +AAAR
Sbjct: 2 GEASSAPGGRGRSGLGGSGGAPRVRGRGTAVGVGIGVRVWRSRRAEGGGAEAAAARTAGG 61
Query: 101 EARAEVARGERVDERVEAGVGEAQRAPVGQAHHSHGQQVAGSEGGHVQGAAARVLPGGHA 160
E RA+ G + DE G +R +HGQ G
Sbjct: 62 EPRAQRQAGSQADEE----GGRPERV-------NHGQVPQG------------------- 91
Query: 161 ELQRAVAHGAVVAEVGRREERRQQPHQPH----------CGAGVTRRAQGARAQRVPHGQ 210
E RA+A G V E + +PH H GAG RR GA R P G
Sbjct: 92 ERLRAMAKGGVGKGSQGAERQASRPHAEHRLGLSHLTRAAGAGAARRRAGAARTRSPKGC 151
Query: 211 RTCPRRQQPA 220
R R + A
Sbjct: 152 RAGAARLERA 161
>gi|239508698 PREDICTED: similar to mucin [Homo sapiens]
Length = 265
Score = 42.4 bits (98), Expect = 3e-04
Identities = 45/165 (27%), Positives = 66/165 (40%), Gaps = 22/165 (13%)
Query: 57 RDQQPPARPGVSGAAGWARGRGADATQGAAGTVAASAAARPQAAEARAEVARGERVDERV 116
+ QQP RP +G G RG G+ + G + +AA A A +RG R ++R
Sbjct: 106 KPQQPQCRP--AGGTGQRRGSGSSPSADQQG----AQDREEEAAAAPAPTSRGHRTEKRK 159
Query: 117 EAGVGEAQRAPVGQAHHSHGQQVAGSEGGHVQGAAARVLPGGHAELQRAVAHGAVVAEVG 176
+ QR P G + S QGA R + A V G
Sbjct: 160 PQ---QPQRRPAAGTGQRRGSR--SSPSADQQGAQDR---------EEEAAAAPVPTSRG 205
Query: 177 RREERRQQPHQPHC-GAGVTRRAQGARAQRVPHGQRTCPRRQQPA 220
R E+R++ QP C A T + +G+R+ QR R ++ A
Sbjct: 206 HRTEKRKR-QQPQCRPAAGTGQRRGSRSSPSADQQRAQDREEEAA 249
Score = 34.7 bits (78), Expect = 0.066
Identities = 54/192 (28%), Positives = 70/192 (36%), Gaps = 43/192 (22%)
Query: 59 QQPPARPGVSGAAGWARGRGAD--ATQGAAGTVAASAAARPQAAEARAEVARGERVDERV 116
QQP +P +G G RG G+ A Q A AAA P A + RA+ D
Sbjct: 37 QQPQCQP--AGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQ-------DREE 87
Query: 117 EAGVGEAQRAPVGQAHHSHGQQ--------VAGSEGGHVQGAAARVLPGGHAELQRAVAH 168
EA A AP H + ++ G+ G++ G + + A
Sbjct: 88 EAA---AAPAPTSSGHRTEKRKPQQPQCRPAGGTGQRRGSGSSPSADQQGAQDREEEAAA 144
Query: 169 GAVVAEVGRREERR--QQP-HQPHCGAGVTR---------------RAQGARAQRVP--H 208
G R E+R QQP +P G G R R + A A VP
Sbjct: 145 APAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRSSPSADQQGAQDREEEAAAAPVPTSR 204
Query: 209 GQRTCPR-RQQP 219
G RT R RQQP
Sbjct: 205 GHRTEKRKRQQP 216
>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 41.6 bits (96), Expect = 5e-04
Identities = 59/177 (33%), Positives = 69/177 (38%), Gaps = 28/177 (15%)
Query: 41 RGIAPSLARWRPA---FGERDQQPPARPGVSGAAGWARGRGADATQG--AAGTVAASAAA 95
R +APS A A F ERD R G G RG G D G GTVAA+A
Sbjct: 226 RLVAPSRADTHAALAAFPERDIFHGGRVVALGVVGEGRGHGGDRRGGGEGLGTVAAAAPL 285
Query: 96 RPQAAEARAEVARGERVDERVEAGVGEA--QRAPVGQAHHSHGQQVAGSEGGHVQGAAAR 153
R A + G V R AG+ E R + +A H ++ AG G
Sbjct: 286 RVCADDL------GAAVGVRGLAGLQEGLDSRHLLHEAQPLHARRRAGHAGSF------- 332
Query: 154 VLPGGHAELQRAVAH-----GAVVAEVGRREERRQQPHQPHCGAGVTRRAQGARAQR 205
L GG L+R H G V GRR R Q G G RR QG R +R
Sbjct: 333 WLRGGRDRLRRGGGHTKSHLGVVTIVPGRR--GRAAGGQERGGRG-RRRQQGRRGRR 386
>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 41.6 bits (96), Expect = 5e-04
Identities = 59/177 (33%), Positives = 69/177 (38%), Gaps = 28/177 (15%)
Query: 41 RGIAPSLARWRPA---FGERDQQPPARPGVSGAAGWARGRGADATQG--AAGTVAASAAA 95
R +APS A A F ERD R G G RG G D G GTVAA+A
Sbjct: 226 RLVAPSRADTHAALAAFPERDIFHGGRVVALGVVGEGRGHGGDRRGGGEGLGTVAAAAPL 285
Query: 96 RPQAAEARAEVARGERVDERVEAGVGEA--QRAPVGQAHHSHGQQVAGSEGGHVQGAAAR 153
R A + G V R AG+ E R + +A H ++ AG G
Sbjct: 286 RVCADDL------GAAVGVRGLAGLQEGLDSRHLLHEAQPLHARRRAGHAGSF------- 332
Query: 154 VLPGGHAELQRAVAH-----GAVVAEVGRREERRQQPHQPHCGAGVTRRAQGARAQR 205
L GG L+R H G V GRR R Q G G RR QG R +R
Sbjct: 333 WLRGGRDRLRRGGGHTKSHLGVVTIVPGRR--GRAAGGQERGGRG-RRRQQGRRGRR 386
>gi|31077092 neurogenin 2 [Homo sapiens]
Length = 272
Score = 41.6 bits (96), Expect = 5e-04
Identities = 33/87 (37%), Positives = 43/87 (49%), Gaps = 16/87 (18%)
Query: 44 APSLARWRPAFGERDQQPPARPGVSGAAGWARGRGADATQGAAGTVAASA-AARP----- 97
+P+LA P D++ PG SG A R RGA+A QGA G VAA A RP
Sbjct: 24 SPALAALTPLSSSADEEEEEEPGASGGA--RRQRGAEAGQGARGGVAAGAEGCRPARLLG 81
Query: 98 -------QAAEARAEVARGERVDERVE 117
+ + ARA V+RG + E V+
Sbjct: 82 LVHDCKRRPSRARA-VSRGAKTAETVQ 107
>gi|239743051 PREDICTED: hypothetical protein XP_002342747 [Homo
sapiens]
Length = 306
Score = 40.4 bits (93), Expect = 0.001
Identities = 43/156 (27%), Positives = 59/156 (37%), Gaps = 31/156 (19%)
Query: 59 QQPPARPGVSGAAGWARGRGADATQGAAGTVAASAAARPQAAEARAEVARGERVDERVEA 118
QQP +P +G G RG G+ + G + +AA A A +RG R ++R
Sbjct: 37 QQPQCQP--AGGTGQRRGSGSSPSADQQG----AQDREEEAAAAPAPTSRGHRTEKRKPQ 90
Query: 119 GVGEAQRAPVGQAHHSHGQQVAGSEGGHVQGAAARVLPGGHAELQRAVAHGAVVAEVGRR 178
+ QR P G G + S QGA R + A G R
Sbjct: 91 ---QPQRRPAGGTGQRRGSR--SSSSADQQGAQDR---------EEEAAAAPAPTSSGHR 136
Query: 179 EERRQQPHQPHC----------GAGVTRRAQGARAQ 204
E+R +P QP C G+G + A RAQ
Sbjct: 137 TEKR-KPQQPQCRPAAGTGQRRGSGCSPSADQQRAQ 171
Score = 33.5 bits (75), Expect = 0.15
Identities = 44/160 (27%), Positives = 58/160 (36%), Gaps = 20/160 (12%)
Query: 57 RDQQPPARPGVSGAAGWARGRGADATQGAAGTVAASAAARPQAAEARAEVARGERVDERV 116
+ QQP RP AAG + RG+ + A A +A A + G R ++R
Sbjct: 141 KPQQPQCRP----AAGTGQRRGSGCSPSADQQRAQD--REEEATAAPVPTSSGHRTEKRK 194
Query: 117 EAGVGEAQRAPVGQAHHSHGQQVAGSEGGHVQGAAARVLPGGHAELQRAVAHGAVVAEVG 176
+ GQ S GG Q +R P A+ QRA
Sbjct: 195 RLQLQCQPAGGTGQRRGSRSSPSRQPAGGTGQRRGSRSSPS--ADQQRA---------QD 243
Query: 177 RREERRQQPHQPHCGAGVTRRAQGARAQRVPHGQRTCPRR 216
R EE Q +P AG T + +G A VP T RR
Sbjct: 244 REEEAAQPQRRP---AGGTGQRRGTAAAPVPTTGGTGQRR 280
>gi|169216514 PREDICTED: similar to paraneoplastic antigen MA2 [Homo
sapiens]
Length = 340
Score = 39.7 bits (91), Expect = 0.002
Identities = 41/149 (27%), Positives = 48/149 (32%), Gaps = 27/149 (18%)
Query: 65 PGVSGAAGWARGRGADATQGAAGTVAASAAARPQAAEARAEVARGERVDERVEAGVGEAQ 124
P +GAAG G GAAG + + A AEA E + E G G+
Sbjct: 106 PSEAGAAGEEEEAGDGGAAGAAGAIGETGAVGKGEAEATGEGGSASEAEGAGEGGAGDEL 165
Query: 125 RAPVGQAHHSHGQQVAGSEGGHVQGAAARVLPGGHAELQRAVAHGAVVAEVGRREERRQQ 184
R VA +GAA P G AE AV V E G E
Sbjct: 166 R-------------VAEEARESDEGAAGDTGPAGEAE---AVGEAGAVGEAGAAGE---- 205
Query: 185 PHQPHCGAGVTRRAQGARAQRVPHGQRTC 213
AG A+G R R C
Sbjct: 206 -------AGAVGEARGTNVTRAWVQPRRC 227
>gi|169216749 PREDICTED: similar to Putative paraneoplastic
antigen-like protein 6B-like protein [Homo sapiens]
Length = 340
Score = 39.7 bits (91), Expect = 0.002
Identities = 41/149 (27%), Positives = 48/149 (32%), Gaps = 27/149 (18%)
Query: 65 PGVSGAAGWARGRGADATQGAAGTVAASAAARPQAAEARAEVARGERVDERVEAGVGEAQ 124
P +GAAG G GAAG + + A AEA E + E G G+
Sbjct: 106 PSEAGAAGEEEEAGDGGAAGAAGAIGETGAVGKGEAEATGEGGSASEAEGAGEGGAGDEL 165
Query: 125 RAPVGQAHHSHGQQVAGSEGGHVQGAAARVLPGGHAELQRAVAHGAVVAEVGRREERRQQ 184
R VA +GAA P G AE AV V E G E
Sbjct: 166 R-------------VAEEARESDEGAAGDTGPAGEAE---AVGEAGAVGEAGAAGE---- 205
Query: 185 PHQPHCGAGVTRRAQGARAQRVPHGQRTC 213
AG A+G R R C
Sbjct: 206 -------AGAVGEARGTNVTRAWVQPRRC 227
>gi|116256464 hypothetical protein LOC343990 [Homo sapiens]
Length = 962
Score = 38.5 bits (88), Expect = 0.005
Identities = 57/226 (25%), Positives = 78/226 (34%), Gaps = 33/226 (14%)
Query: 27 ERGQVAPLNAPQRARGIAPSL-ARWRPA-FGERDQQPPARPGVSGAAGWARGRGADATQG 84
E+G P P+R P A P G PA P + R A A++G
Sbjct: 450 EKGPPGPAPEPEREAETEPERGAGTEPERIGTEPSTAPA-PSPPAPKSCLKHRPAAASEG 508
Query: 85 AAGTVAASAAARPQA----AEARAEVARGERVD-ERVEAGVGEAQRAPVGQAHHSHGQQV 139
A + +AA P AE A ER ER EA A+RA + G ++
Sbjct: 509 PAASPPLAAAESPPVEPGPGSLDAEAAAPERPKAERAEAPPAGAERAAPERKAERGGAEL 568
Query: 140 AGSEGGHVQGAAARVLPGGHAELQRA------VAHGAVVAEVGRREERRQQPHQPHCGAG 193
G++ V AR PG L+RA G V ++ + P H G
Sbjct: 569 RGAKKFSVSSCRARPRPGVSRPLERASGRLPLARSGPVWRSEAALDDLQGLPEPQHAKPG 628
Query: 194 VTRRAQ--------------GAR-----AQRVPHGQRTCPRRQQPA 220
+ A+ G R A P + CP Q+PA
Sbjct: 629 PRKLAERGPQDSGDRAASPAGPRKSPQEAAAAPGTREPCPAAQEPA 674
>gi|239754474 PREDICTED: similar to mucin [Homo sapiens]
Length = 417
Score = 37.0 bits (84), Expect = 0.013
Identities = 48/157 (30%), Positives = 61/157 (38%), Gaps = 28/157 (17%)
Query: 59 QQPPARPGVSGAAGWARGRGAD--ATQGAAGTVAASAAARPQAAEARAEVARGERVDERV 116
QQP +P +G G RG G+ A Q A AAA P A + RA+ +R +E
Sbjct: 37 QQPQCQP--AGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQ----DREEEAA 90
Query: 117 EAGVGEAQRAPVGQAHHSHG----QQVAGSEGGHVQGAAARVLPGGHAELQRA------V 166
A V P H + Q GG Q +R P A+ QRA
Sbjct: 91 AAPV------PTSSGHRTEKRKRLQLQCQPAGGTGQRRGSRSSPS--ADQQRAQDREEEA 142
Query: 167 AHGAVVAEVGRREE--RRQQPHQPHCGAGVTRRAQGA 201
A V G R E +RQQP + G RR G+
Sbjct: 143 AAAPVPTSRGHRTEKRKRQQPQRRPAGGTGQRRGSGS 179
Score = 37.0 bits (84), Expect = 0.013
Identities = 41/152 (26%), Positives = 59/152 (38%), Gaps = 18/152 (11%)
Query: 70 AAGWARGRGADATQGAAGTVAASAAARPQAAEARAEVARGERVDERVEAGVGEAQRAPVG 129
A G + RG+ ++ A A +AA A +RG R ++R + QR P G
Sbjct: 115 AGGTGQRRGSRSSPSADQQRAQDR--EEEAAAAPVPTSRGHRTEKRKRQ---QPQRRPAG 169
Query: 130 QAHHSHGQQVAGSEGGHVQGAAARVLPGGHAELQRAVAHGAVVAEVGRREERRQQPHQPH 189
G S QGA R + A G R E+R+ P QP
Sbjct: 170 GTGQRRGS--GSSPSADQQGAQDR---------EEEAAAAPAPTSRGHRTEKRK-PQQPQ 217
Query: 190 CG-AGVTRRAQGARAQRVPHGQRTCPRRQQPA 220
C AG T + +G+R+ QR R ++ A
Sbjct: 218 CRPAGGTGQRRGSRSSPSADQQRAQDREEEAA 249
Score = 34.3 bits (77), Expect = 0.086
Identities = 42/148 (28%), Positives = 57/148 (38%), Gaps = 24/148 (16%)
Query: 57 RDQQPPARPGVSGAAGWARGRGADATQGAAGTVAASAAARPQAAEARAEVARGERVDERV 116
+ QQP RP +G G RG G + G + +AA A A + G R ++R
Sbjct: 265 KPQQPQRRP--AGGTGQRRGSGYSPSADQQG----AQDREEEAAAAPAPTSSGHRTEKRK 318
Query: 117 EAGVGEAQRAPVGQAHHSHGQQVAGSEGGHVQGAAARVLPGGHAELQRAVAHGAVVAEVG 176
+ Q P G G + S + QGA R + A V G
Sbjct: 319 RL---QLQCQPAGGTGQRRGSGCSSS--ANQQGAQDR---------EEEAAAAPVPTSSG 364
Query: 177 RREERR--QQP-HQPHCGAGVTRRAQGA 201
R E+R QQP +P G G RR G+
Sbjct: 365 HRTEKRKPQQPQRRPAAGTG-QRRGSGS 391
Score = 32.3 bits (72), Expect = 0.33
Identities = 41/164 (25%), Positives = 61/164 (37%), Gaps = 20/164 (12%)
Query: 57 RDQQPPARPGVSGAAGWARGRGADATQGAAGTVAASAAARPQAAEARAEVARGERVDERV 116
+ QQP RP A G + RG+ ++ A A +AA A A +RG R ++R
Sbjct: 212 KPQQPQCRP----AGGTGQRRGSRSSPSADQQRAQDR--EEEAAAAPAPTSRGHRTEKRK 265
Query: 117 EAGVGEAQRAPVGQAHHSHGQQVAGSEGGHVQGAAARVLPGGHAELQRAVAHGAVVAEVG 176
+ QR P G G S QGA R + A G
Sbjct: 266 PQ---QPQRRPAGGTGQRRGS--GYSPSADQQGAQDR---------EEEAAAAPAPTSSG 311
Query: 177 RREERRQQPHQPHCGAGVTRRAQGARAQRVPHGQRTCPRRQQPA 220
R E+R++ AG T + +G+ + Q R ++ A
Sbjct: 312 HRTEKRKRLQLQCQPAGGTGQRRGSGCSSSANQQGAQDREEEAA 355
>gi|226437579 NAC alpha domain containing [Homo sapiens]
Length = 1562
Score = 36.6 bits (83), Expect = 0.017
Identities = 31/126 (24%), Positives = 50/126 (39%), Gaps = 5/126 (3%)
Query: 19 PLGWCSAVERGQ-VAPLNAPQRARGIAPSLARWRPAFGERDQQPPARPGVSGAAGWARGR 77
P+ + E G+ + P AP+ P++ PA ++ QQ +P WA
Sbjct: 960 PVATMAQQEVGEALGPRPAPEEKNAALPTVPE--PAALDQVQQDDPQPAAEAGTPWAAQE 1017
Query: 78 GADATQG--AAGTVAASAAARPQAAEARAEVARGERVDERVEAGVGEAQRAPVGQAHHSH 135
AD+T G A ++ A + AEA + R ++ R G G +P +
Sbjct: 1018 DADSTLGMEALSLPEPASGAGEEIAEALSRPGREACLEARAHTGDGAKPDSPQKETLEVE 1077
Query: 136 GQQVAG 141
QQ G
Sbjct: 1078 NQQEGG 1083
Score = 28.1 bits (61), Expect = 6.1
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 76 GRGADATQGAAGTVAASAAARPQAAEARAEVA-RGERVDERVEAGVGEAQRAPVGQAHHS 134
G GA Q GTV+ + A PQ ++ A ++ R E + E E G+ Q + H+
Sbjct: 428 GGGAKGLQAQDGTVSWAVEAAPQTSDRGAYLSQRQELISEVTEEGLALGQESTATVTPHT 487
>gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 36.6 bits (83), Expect = 0.017
Identities = 31/126 (24%), Positives = 50/126 (39%), Gaps = 5/126 (3%)
Query: 19 PLGWCSAVERGQ-VAPLNAPQRARGIAPSLARWRPAFGERDQQPPARPGVSGAAGWARGR 77
P+ + E G+ + P AP+ P++ PA ++ QQ +P WA
Sbjct: 920 PVATMAQQEVGEALGPRPAPEEKNAALPTVPE--PAALDQVQQDDPQPAAEAGTPWAAQE 977
Query: 78 GADATQG--AAGTVAASAAARPQAAEARAEVARGERVDERVEAGVGEAQRAPVGQAHHSH 135
AD+T G A ++ A + AEA + R ++ R G G +P +
Sbjct: 978 DADSTLGMEALSLPEPASGAGEEIAEALSRPGREACLEARAHTGDGAKPDSPQKETLEVE 1037
Query: 136 GQQVAG 141
QQ G
Sbjct: 1038 NQQEGG 1043
Score = 28.1 bits (61), Expect = 6.1
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 76 GRGADATQGAAGTVAASAAARPQAAEARAEVA-RGERVDERVEAGVGEAQRAPVGQAHHS 134
G GA Q GTV+ + A PQ ++ A ++ R E + E E G+ Q + H+
Sbjct: 428 GGGAKGLQAQDGTVSWAVEAAPQTSDRGAYLSQRQELISEVTEEGLALGQESTATVTPHT 487
>gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 36.6 bits (83), Expect = 0.017
Identities = 31/126 (24%), Positives = 50/126 (39%), Gaps = 5/126 (3%)
Query: 19 PLGWCSAVERGQ-VAPLNAPQRARGIAPSLARWRPAFGERDQQPPARPGVSGAAGWARGR 77
P+ + E G+ + P AP+ P++ PA ++ QQ +P WA
Sbjct: 920 PVATMAQQEVGEALGPRPAPEEKNAALPTVPE--PAALDQVQQDDPQPAAEAGTPWAAQE 977
Query: 78 GADATQG--AAGTVAASAAARPQAAEARAEVARGERVDERVEAGVGEAQRAPVGQAHHSH 135
AD+T G A ++ A + AEA + R ++ R G G +P +
Sbjct: 978 DADSTLGMEALSLPEPASGAGEEIAEALSRPGREACLEARAHTGDGAKPDSPQKETLEVE 1037
Query: 136 GQQVAG 141
QQ G
Sbjct: 1038 NQQEGG 1043
Score = 28.1 bits (61), Expect = 6.1
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 76 GRGADATQGAAGTVAASAAARPQAAEARAEVA-RGERVDERVEAGVGEAQRAPVGQAHHS 134
G GA Q GTV+ + A PQ ++ A ++ R E + E E G+ Q + H+
Sbjct: 428 GGGAKGLQAQDGTVSWAVEAAPQTSDRGAYLSQRQELISEVTEEGLALGQESTATVTPHT 487
>gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1562
Score = 36.6 bits (83), Expect = 0.017
Identities = 31/126 (24%), Positives = 50/126 (39%), Gaps = 5/126 (3%)
Query: 19 PLGWCSAVERGQ-VAPLNAPQRARGIAPSLARWRPAFGERDQQPPARPGVSGAAGWARGR 77
P+ + E G+ + P AP+ P++ PA ++ QQ +P WA
Sbjct: 960 PVATMAQQEVGEALGPRPAPEEKNAALPTVPE--PAALDQVQQDDPQPAAEAGTPWAAQE 1017
Query: 78 GADATQG--AAGTVAASAAARPQAAEARAEVARGERVDERVEAGVGEAQRAPVGQAHHSH 135
AD+T G A ++ A + AEA + R ++ R G G +P +
Sbjct: 1018 DADSTLGMEALSLPEPASGAGEEIAEALSRPGREACLEARAHTGDGAKPDSPQKETLEVE 1077
Query: 136 GQQVAG 141
QQ G
Sbjct: 1078 NQQEGG 1083
Score = 28.1 bits (61), Expect = 6.1
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 76 GRGADATQGAAGTVAASAAARPQAAEARAEVA-RGERVDERVEAGVGEAQRAPVGQAHHS 134
G GA Q GTV+ + A PQ ++ A ++ R E + E E G+ Q + H+
Sbjct: 428 GGGAKGLQAQDGTVSWAVEAAPQTSDRGAYLSQRQELISEVTEEGLALGQESTATVTPHT 487
>gi|239508792 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 36.6 bits (83), Expect = 0.017
Identities = 31/126 (24%), Positives = 50/126 (39%), Gaps = 5/126 (3%)
Query: 19 PLGWCSAVERGQ-VAPLNAPQRARGIAPSLARWRPAFGERDQQPPARPGVSGAAGWARGR 77
P+ + E G+ + P AP+ P++ PA ++ QQ +P WA
Sbjct: 920 PVATMAQQEVGEALGPRPAPEEKNAALPTVPE--PAALDQVQQDDPQPAAEAGTPWAAQE 977
Query: 78 GADATQG--AAGTVAASAAARPQAAEARAEVARGERVDERVEAGVGEAQRAPVGQAHHSH 135
AD+T G A ++ A + AEA + R ++ R G G +P +
Sbjct: 978 DADSTLGMEALSLPEPASGAGEEIAEALSRPGREACLEARAHTGDGAKPDSPQKETLEVE 1037
Query: 136 GQQVAG 141
QQ G
Sbjct: 1038 NQQEGG 1043
Score = 28.1 bits (61), Expect = 6.1
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 76 GRGADATQGAAGTVAASAAARPQAAEARAEVA-RGERVDERVEAGVGEAQRAPVGQAHHS 134
G GA Q GTV+ + A PQ ++ A ++ R E + E E G+ Q + H+
Sbjct: 428 GGGAKGLQAQDGTVSWAVEAAPQTSDRGAYLSQRQELISEVTEEGLALGQESTATVTPHT 487
>gi|63175652 CREBBP/EP300 inhibitor 2 [Homo sapiens]
Length = 236
Score = 36.6 bits (83), Expect = 0.017
Identities = 41/118 (34%), Positives = 48/118 (40%), Gaps = 21/118 (17%)
Query: 26 VERGQVAPLNA-PQRARGIAPSLARWRPAFGERDQQPPARPGVSGAAGWARGRGADATQG 84
V RG+ P A P+ A A + AR P R+ R + AA A RGA
Sbjct: 27 VGRGRREPAPAQPEEAGEGAMAAARGGPVPAARE----GRMAAARAAPAAAARGAPVAAA 82
Query: 85 AAGTVAASAAARPQAAEAR----AEVAR--GERVDERVEAGVGEAQRAPVGQAHHSHG 136
A AA+ P AA AR AEVAR GE VDE P G+ HG
Sbjct: 83 ALARAAAAGRESPAAAAAREARMAEVARLLGEPVDE----------EGPEGRPRSRHG 130
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 36.2 bits (82), Expect = 0.023
Identities = 39/169 (23%), Positives = 64/169 (37%), Gaps = 16/169 (9%)
Query: 39 RARGIAPSLARWRPAFGERDQQPPARPGVSGAAGWARGRGADATQGAAGTVAASAAARPQ 98
+ RG RW+ + P A+P G + R RG A + G + +P+
Sbjct: 393 KRRGDGRKKPRWQNPRRRAQKAPAAKPR-GGGSKKPRRRGPKAAKSRGGKSRSGGGKKPR 451
Query: 99 AAEARAEVARGERVDERVEAGVGEAQRAPVGQAHHSHGQQVAGSEGGHVQGAAARVL--P 156
RG++ ++ A G R Q S GG ++ + + L
Sbjct: 452 R--------RGQKARQKA-AEAGAESRGDKKQGRQKASAAGTKSRGGGLKSHSGKNLWRR 502
Query: 157 GGHAELQRAVAHGAVVAEVGRREERRQQPHQPHCGAGVTRRAQGARAQR 205
G AE A A GR++ RRQ+P AG R G+++++
Sbjct: 503 GQKAEAAGEKATAAGAKSRGRKQPRRQKP----AVAGAKSRVGGSKSRQ 547
Score = 34.7 bits (78), Expect = 0.066
Identities = 49/192 (25%), Positives = 74/192 (38%), Gaps = 27/192 (14%)
Query: 55 GERDQQPPARPGVSGAAG----WARG---RGADATQ------GAAGTVAASAAARPQAAE 101
G + ++ P R G AA WA G RG+ Q AAG+ +++AAA Q AE
Sbjct: 625 GAKSRKKPWRRGQKDAAAAEKAWATGATSRGSGGKQPRWQKPAAAGSESSAAAAVGQEAE 684
Query: 102 ARAEVAR---GERVDERVEAGVG------EAQRAPVGQAHHSHGQQVAGSEGGHVQGA-A 151
AR + R R D A VG ++ +G++ G + GS G +G+
Sbjct: 685 ARKKPRRRRAKSRGDGGQNAAVGINPWQRRGKKPRLGKSRGGGGAKSRGSGGAKSRGSGG 744
Query: 152 ARVLPGGHAELQRAVAHGAVVAEVGRREERRQQPHQPHCGAGVTRRAQGARAQRVP---- 207
A+ G A ++ G G + R G A G + RV
Sbjct: 745 AKSRSGKKAAASKSHGGGGAKRRRGGGAKSRSGEKAVTAGGQKAAAAGGKKPPRVKSRGG 804
Query: 208 HGQRTCPRRQQP 219
GQ+ ++P
Sbjct: 805 RGQKAAAGGKKP 816
Score = 33.1 bits (74), Expect = 0.19
Identities = 39/170 (22%), Positives = 62/170 (36%), Gaps = 20/170 (11%)
Query: 36 APQRARGIAPSLARWRPAFGERDQQPPARPGVSGAAGWARGRGADATQGAAGTVAASAAA 95
A R G + A + G R ++P R + A G + R AAG+ A A
Sbjct: 98 AENRGGGEQKAAAAGTKSLGGRGRKPRRRGQKAAATGSKKPRWRAQKSAAAGSKNRGAGA 157
Query: 96 RPQAAEARAEVARGERVDERVEAGVGEAQRAPVGQAHHSHGQQVAGSEGGHVQGAAARVL 155
+ AA A + GE+ + AG ++ G+ G + G E +
Sbjct: 158 QKAAAAAGVKSQGGEKPQKAAAAGA----KSRSGKKPRRRGAKSRGDEDKKGR------- 206
Query: 156 PGGHAELQRAVAHGAVVAEVGRREERRQQPHQPHCGAGVTRRAQGARAQR 205
QR GRR++ R+ +P G +RR G + Q+
Sbjct: 207 -------QREAKSRFGKTRGGRRKKHRRP--KPAAGGAKSRRGGGKKPQK 247
Score = 29.6 bits (65), Expect = 2.1
Identities = 39/154 (25%), Positives = 57/154 (37%), Gaps = 16/154 (10%)
Query: 68 SGAAGWARGRGADATQGAAGTVAASAAARPQAAEARAEVARGERVDERVEAGVGEAQR-A 126
+GA G G + AAGT + R + A G + AQ+ A
Sbjct: 93 AGAGGAENRGGGEQKAAAAGTKSLGGRGRKPRRRGQKAAATGSKKPR------WRAQKSA 146
Query: 127 PVGQAHHSHGQQVAGSEGGHVQGAAARVLPGGHAELQRAVAHGAVVAEVGRREERRQQPH 186
G + G Q A AAA V G + Q+A A GA + G++ RR
Sbjct: 147 AAGSKNRGAGAQKA--------AAAAGVKSQGGEKPQKAAAAGA-KSRSGKKPRRRGAKS 197
Query: 187 QPHCGAGVTRRAQGARAQRVPHGQRTCPRRQQPA 220
+ +R +R + G+R RR +PA
Sbjct: 198 RGDEDKKGRQREAKSRFGKTRGGRRKKHRRPKPA 231
>gi|4502523 calcium channel, voltage-dependent, N type, alpha 1B
subunit [Homo sapiens]
Length = 2339
Score = 35.0 bits (79), Expect = 0.050
Identities = 40/159 (25%), Positives = 55/159 (34%), Gaps = 28/159 (17%)
Query: 78 GADATQGAAGTVAASAAARPQAAEARAEVARGER------VDERVEAGVGEAQRAPVGQA 131
G D +G G ARP+AAEA V R D+ AG + AP ++
Sbjct: 822 GRDGARGPVG-----GKARPEAAEAPEGVDPPRRHHRHRDKDKTPAAGDQDRAEAPKAES 876
Query: 132 ------------HHSHGQQVAGSEGGHVQGAAARVLPGGHAELQRAVAHGAVVAEVGRRE 179
H SH ++ AG + GG +R E RE
Sbjct: 877 GEPGAREERPRPHRSHSKEAAGPPEARSERGRGPGPEGGRRHHRRGSPE-----EAAERE 931
Query: 180 ERRQQPHQPHCGAGVTRRAQGARAQRVPHGQRTCPRRQQ 218
RR + H+ + A+G R R G R PR +
Sbjct: 932 PRRHRAHRHQDPSKECAGAKGERRARHRGGPRAGPREAE 970
Score = 28.9 bits (63), Expect = 3.6
Identities = 38/167 (22%), Positives = 53/167 (31%), Gaps = 14/167 (8%)
Query: 36 APQRARGIAPSLARWRPAFGERDQQP-PARPGVSGAAG-----WARGRGADATQGAAGTV 89
A + R AP P G R+++P P R AAG RGRG G
Sbjct: 863 AGDQDRAEAPKAESGEP--GAREERPRPHRSHSKEAAGPPEARSERGRGPGPEGGRRHHR 920
Query: 90 AASAAARPQAAEARAEVARGERVDERVEAGVGEAQRAPVGQAHHSHGQQVAGSEGGHVQG 149
S + R R + + GE + G + +G E
Sbjct: 921 RGSPEEAAEREPRRHRAHRHQDPSKECAGAKGERRARHRGGPRAGPREAESGEEPARRHR 980
Query: 150 AAARVLPGGHA------ELQRAVAHGAVVAEVGRREERRQQPHQPHC 190
A + P A E + +V +E R QP +PHC
Sbjct: 981 ARHKAQPAHEAVEKETTEKEATEKEAEIVEADKEKELRNHQPREPHC 1027
>gi|118498339 EMI domain containing 2 [Homo sapiens]
Length = 439
Score = 35.0 bits (79), Expect = 0.050
Identities = 30/94 (31%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
Query: 61 PPARPGVSGAAGWARGRGADATQGAAGTVAASAAARPQAAEA-RAEVARGERVDERVEAG 119
PP PG G G G+ G GTV S + E +A A GE V + EA
Sbjct: 310 PPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAEGEGVQQLREAL 369
Query: 120 VGEAQRAPVGQAHHSHGQQVAGSEGGHVQGAAAR 153
A+R + + +A EGG Q AA R
Sbjct: 370 KILAERVLILEHMIGIHDPLASPEGGSGQDAALR 403
>gi|239755585 PREDICTED: hypothetical protein [Homo sapiens]
Length = 350
Score = 34.7 bits (78), Expect = 0.066
Identities = 29/88 (32%), Positives = 33/88 (37%), Gaps = 19/88 (21%)
Query: 143 EGGHVQGAAARVLPGGHAELQRAVAHGAVV------------AEVGRREERRQQPHQPHC 190
EGGH+ LPGG V HG +V A VG +R H+
Sbjct: 80 EGGHLASCHVEWLPGGKLPRLPGVGHGCLVTRGAHEVHGDPGAHVGAVAAQRVGQHR--- 136
Query: 191 GAGVTRRAQGARAQRVPHGQRTCPRRQQ 218
G R G R R HGQR P QQ
Sbjct: 137 --GQLRLLLGGREHR--HGQRALPALQQ 160
>gi|169161029 PREDICTED: hypothetical protein [Homo sapiens]
Length = 268
Score = 34.7 bits (78), Expect = 0.066
Identities = 25/77 (32%), Positives = 31/77 (40%), Gaps = 8/77 (10%)
Query: 29 GQVAPLNAPQRARGIAPSLARWRPAFGERDQQP--------PARPGVSGAAGWARGRGAD 80
G + P + A G AP+ AR R G + P P PG+S A G GRG
Sbjct: 129 GGLEPSPGARGAVGAAPAAARHRKPRGRSRRAPQMPLRVLPPILPGLSRAGGATGGRGLP 188
Query: 81 ATQGAAGTVAASAAARP 97
+G G AA P
Sbjct: 189 GRRGLPGRSGLQGAAVP 205
>gi|239750101 PREDICTED: hypothetical protein [Homo sapiens]
Length = 365
Score = 34.7 bits (78), Expect = 0.066
Identities = 29/88 (32%), Positives = 33/88 (37%), Gaps = 19/88 (21%)
Query: 143 EGGHVQGAAARVLPGGHAELQRAVAHGAVV------------AEVGRREERRQQPHQPHC 190
EGGH+ LPGG V HG +V A VG +R H+
Sbjct: 80 EGGHLASCHVEWLPGGKLPRLPGVGHGCLVTRGAHEVHGDPGAHVGAVAAQRVGQHR--- 136
Query: 191 GAGVTRRAQGARAQRVPHGQRTCPRRQQ 218
G R G R R HGQR P QQ
Sbjct: 137 --GQLRLLLGGREHR--HGQRALPALQQ 160
>gi|169202233 PREDICTED: hypothetical protein [Homo sapiens]
Length = 381
Score = 34.7 bits (78), Expect = 0.066
Identities = 29/88 (32%), Positives = 33/88 (37%), Gaps = 19/88 (21%)
Query: 143 EGGHVQGAAARVLPGGHAELQRAVAHGAVV------------AEVGRREERRQQPHQPHC 190
EGGH+ LPGG V HG +V A VG +R H+
Sbjct: 80 EGGHLASCHVEWLPGGKLPRLPGVGHGCLVTRGAHEVHGDPGAHVGAVAAQRVGQHR--- 136
Query: 191 GAGVTRRAQGARAQRVPHGQRTCPRRQQ 218
G R G R R HGQR P QQ
Sbjct: 137 --GQLRLLLGGREHR--HGQRALPALQQ 160
>gi|92859678 small nuclear RNA activating complex, polypeptide 4,
190kDa [Homo sapiens]
Length = 1469
Score = 34.7 bits (78), Expect = 0.066
Identities = 42/169 (24%), Positives = 65/169 (38%), Gaps = 27/169 (15%)
Query: 43 IAPSLARWRPAFGERDQQPPARPGVSGAAGWARG--------RGADATQGAAGTVAASAA 94
+ P + W PA +Q ++P GA W G +G+ A+QG + + +AA
Sbjct: 565 MVPDMDLWVPA-----RQSTSQPWRGGAGAWLGGPAASLSPPKGSSASQGGSKEASTTAA 619
Query: 95 ARPQAAEARAEVARGERVDERVEAGVGEAQRAPVGQAHHSHGQQVAGSEGGHVQGAAARV 154
A + AR G R+ QA HS + AG+E ++G R
Sbjct: 620 APGEETSPVQVPARAH----------GPVPRS--AQASHSADTRPAGAEKQALEG--GRR 665
Query: 155 LPGGHAELQRAVAHGAVVAEVGRREERRQQPHQPHCGAGVTRRAQGARA 203
L E V A ++E+ +QP P GV+ AR+
Sbjct: 666 LLTVPVETVLRVLRANTAARSCTQKEQLRQPPLPTSSPGVSSGDSVARS 714
Score = 27.7 bits (60), Expect = 8.0
Identities = 35/171 (20%), Positives = 61/171 (35%), Gaps = 29/171 (16%)
Query: 47 LARWRPAFGERDQQPPARPGVSGAAGWARGRGADATQGAAGTVAASAAARPQAAEARAEV 106
L++W+ G++ R + W+ + ++ G++G ++S+++ +
Sbjct: 492 LSKWKIMMGKKQGLRRRRRRARHSVRWSSTSSSGSSSGSSGGSSSSSSSSSEE------- 544
Query: 107 ARGERVDERVEAGVGEAQRAPVG------------QAHHSHGQQVAGSEGGHVQGAAARV 154
DE +A GE RA + A S Q G G + G AA +
Sbjct: 545 ------DEPEQAQAGEGDRALLSPQYMVPDMDLWVPARQSTSQPWRGGAGAWLGGPAASL 598
Query: 155 LP--GGHAELQRAVAHGAVVAEVGRREERRQQPHQPHCGAGVTRRAQGARA 203
P G A + A G Q P + H V R AQ + +
Sbjct: 599 SPPKGSSASQGGSKEASTTAAAPGEETSPVQVPARAH--GPVPRSAQASHS 647
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.129 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,269,072
Number of Sequences: 37866
Number of extensions: 467782
Number of successful extensions: 4119
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 292
Number of HSP's that attempted gapping in prelim test: 3383
Number of HSP's gapped (non-prelim): 954
length of query: 220
length of database: 18,247,518
effective HSP length: 98
effective length of query: 122
effective length of database: 14,536,650
effective search space: 1773471300
effective search space used: 1773471300
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.