KDM6B 2552

Name: KDM6B	Sequence: fasta or formatted (1682aa)		NCBI GI: 122937251
Description: lysine (K)-specific demethylase 6B		Referenced in: Protein Composition and Structure Histones, Related Proteins, and Modifying Enzymes Tetratricopeptide Domains
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.0 151 2 C cysteine 1.7 29 1 D aspartate 2.7 46 2 E glutamate 6.6 111 3 F phenylalanine 2.4 40 2 G glycine 7.6 128 2 H histidine 2.7 46 2 I isoleucine 2.2 37 2 K lysine 4.0 68 2 L leucine 7.8 131 2 M methionine 0.8 14 1 N asparagine 2.3 39 3 P proline 16.1 271 13 Q glutamine 4.2 71 3 R arginine 6.8 114 3 S serine 9.3 156 8 T threonine 5.6 95 11 V valine 4.8 80 3 W tryptophan 1.3 22 2 Y tyrosine 2.0 33 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 lysine (K)-specific demethylase 6B KDM6A 0.197 ubiquitously transcribed tetratricopeptide repeat, ... UTY 0.193 tetratricopeptide repeat protein isoform 3 UTY 0.158 tetratricopeptide repeat protein isoform 2 UTY 0.052 tetratricopeptide repeat protein isoform 1 NACA 0.036 nascent polypeptide-associated complex alpha subuni... FLJ22184 0.033 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.031 PREDICTED: hypothetical protein LOC80164 FMN2 0.030 formin 2 ATN1 0.030 atrophin-1 ATN1 0.030 atrophin-1 FLJ22184 0.029 PREDICTED: hypothetical protein FLJ22184 SHANK1 0.027 SH3 and multiple ankyrin repeat domains 1 RAPH1 0.027 Ras association and pleckstrin homology domains 1 is... C6orf132 0.027 PREDICTED: chromosome 6 open reading frame 132 [Hom... C6orf132 0.027 PREDICTED: chromosome 6 open reading frame 132 [Hom... C6orf132 0.027 PREDICTED: hypothetical protein LOC647024 MUC2 0.025 mucin 2 precursor PRG4 0.025 proteoglycan 4 isoform D PRG4 0.025 proteoglycan 4 isoform C PRG4 0.025 proteoglycan 4 isoform B PRG4 0.025 proteoglycan 4 isoform A PCLO 0.025 piccolo isoform 2 PCLO 0.025 piccolo isoform 1 MLL2 0.024 myeloid/lymphoid or mixed-lineage leukemia 2 MAP1A 0.024 microtubule-associated protein 1A PRB2 0.023 proline-rich protein BstNI subfamily 2 MLL4 0.022 myeloid/lymphoid or mixed-lineage leukemia 4 WIPF3 0.022 WAS/WASL interacting protein family, member 3 [Homo... COL18A1 0.022 alpha 1 type XVIII collagen isoform 3 precursor [Ho... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.