LOC100290082 20883

Name: LOC100290082	Sequence: fasta or formatted (194aa)		NCBI GI: 239751597
Description: PREDICTED: hypothetical protein XP_002347925		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 16.0 31 2 C cysteine 3.1 6 2 D aspartate 1.5 3 1 E glutamate 3.1 6 1 F phenylalanine 0.5 1 1 G glycine 17.0 33 3 H histidine 4.6 9 1 I isoleucine 1.5 3 1 K lysine 2.6 5 1 L leucine 10.3 20 3 M methionine 1.0 2 1 N asparagine 0.0 0 0 P proline 11.3 22 2 Q glutamine 2.6 5 1 R arginine 8.8 17 2 S serine 8.2 16 2 T threonine 3.1 6 1 V valine 3.6 7 1 W tryptophan 1.0 2 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002347925 LOC100292513 1.000 PREDICTED: hypothetical protein LOC100287331 1.000 PREDICTED: hypothetical protein XP_002344192 COL3A1 0.058 collagen type III alpha 1 preproprotein COL2A1 0.053 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.053 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL10A1 0.053 type X collagen alpha 1 precursor SFPQ 0.053 splicing factor proline/glutamine rich (polypyrimidin... COL11A1 0.050 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.050 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.050 alpha 1 type XI collagen isoform A preproprotein [Ho... COL1A2 0.050 alpha 2 type I collagen COL1A1 0.047 alpha 1 type I collagen preproprotein COL5A1 0.047 alpha 1 type V collagen preproprotein PPP1R10 0.045 protein phosphatase 1, regulatory subunit 10 TAF4 0.045 TBP-associated factor 4 COL5A3 0.045 collagen, type V, alpha 3 preproprotein LOC100293375 0.042 PREDICTED: hypothetical protein COL9A3 0.042 alpha 3 type IX collagen COL4A6 0.040 type IV alpha 6 collagen isoform A precursor COL4A6 0.040 type IV alpha 6 collagen isoform B precursor COL18A1 0.040 alpha 1 type XVIII collagen isoform 3 precursor [Ho... COL18A1 0.040 alpha 1 type XVIII collagen isoform 2 precursor [Ho... COL18A1 0.040 alpha 1 type XVIII collagen isoform 1 precursor [Ho... COL4A1 0.037 alpha 1 type IV collagen preproprotein LOC100293055 0.037 PREDICTED: similar to COL22A1 protein COL19A1 0.037 alpha 1 type XIX collagen precursor COL22A1 0.037 collagen, type XXII, alpha 1 WTIP 0.037 Wilms tumor 1 interacting protein LOC100287063 0.037 PREDICTED: hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.