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Search of human proteins with 239746922
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239746922 PREDICTED: similar to cancer/testis antigen family
147, member B1 isoform 2 [Homo sapiens]
(294 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239746922 PREDICTED: similar to cancer/testis antigen family ... 579 e-166
gi|113430055 PREDICTED: similar to cancer/testis antigen family ... 548 e-156
gi|239752405 PREDICTED: similar to cancer/testis antigen family ... 528 e-150
gi|224591404 cancer/testis antigen family 147, member B1 [Homo s... 365 e-101
gi|121949802 cancer/testis antigen family 47, member A1 [Homo sa... 338 3e-93
gi|121949798 cancer/testis antigen family 47, member A2 [Homo sa... 338 3e-93
gi|121949773 cancer/testis antigen family 47, member A3 [Homo sa... 338 3e-93
gi|121949771 cancer/testis antigen family 47, member A4 [Homo sa... 338 3e-93
gi|121949796 cancer/testis antigen family 47, member A5 [Homo sa... 338 3e-93
gi|121949794 cancer/testis antigen family 47, member A6 [Homo sa... 338 3e-93
gi|121949792 cancer/testis antigen family 47, member A7 [Homo sa... 338 3e-93
gi|121949790 cancer/testis antigen family 47, member A8 [Homo sa... 338 3e-93
gi|121949788 cancer/testis antigen family 47, member A9 [Homo sa... 338 3e-93
gi|121949786 cancer/testis antigen family 47, member A10 [Homo s... 338 3e-93
gi|122114660 cancer/testis antigen family 47, member A11 [Homo s... 338 3e-93
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 64 2e-10
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 57 1e-08
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ... 57 1e-08
gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ... 57 1e-08
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 57 3e-08
gi|105990539 neurofilament, light polypeptide 68kDa [Homo sapiens] 56 3e-08
gi|23503317 coiled-coil domain containing 96 [Homo sapiens] 53 3e-07
gi|48255889 protein kinase C substrate 80K-H isoform 1 [Homo sap... 51 1e-06
gi|156071476 hypothetical protein LOC401137 [Homo sapiens] 51 1e-06
gi|17975763 myelin transcription factor 1 [Homo sapiens] 51 1e-06
gi|221219020 NYD-SP11 protein [Homo sapiens] 50 2e-06
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 50 2e-06
gi|48255891 protein kinase C substrate 80K-H isoform 2 [Homo sap... 50 2e-06
gi|21361639 DIPB protein [Homo sapiens] 48 1e-05
gi|21493022 A kinase (PRKA) anchor protein 12 isoform 1 [Homo sa... 48 1e-05
>gi|239746922 PREDICTED: similar to cancer/testis antigen family
147, member B1 isoform 2 [Homo sapiens]
Length = 294
Score = 579 bits (1493), Expect = e-166
Identities = 294/294 (100%), Positives = 294/294 (100%)
Query: 1 MSATGDQDLIQEDQEAPVNQEGAQAEAVGDREGGDSGPDSGNTVAGVAGPMRGLGEEEGE 60
MSATGDQDLIQEDQEAPVNQEGAQAEAVGDREGGDSGPDSGNTVAGVAGPMRGLGEEEGE
Sbjct: 1 MSATGDQDLIQEDQEAPVNQEGAQAEAVGDREGGDSGPDSGNTVAGVAGPMRGLGEEEGE 60
Query: 61 QAAGLAAAPGGGNAEEDSEIRIVEEEEEEEEERNEADNFDLVAAARRYPIRGFRMEFLDM 120
QAAGLAAAPGGGNAEEDSEIRIVEEEEEEEEERNEADNFDLVAAARRYPIRGFRMEFLDM
Sbjct: 61 QAAGLAAAPGGGNAEEDSEIRIVEEEEEEEEERNEADNFDLVAAARRYPIRGFRMEFLDM 120
Query: 121 VHSLLLRIYHNDHILIRMRGGRLMRRRRTAAPSGSEEPRLLLVHERLGVGAAGPEGEGLG 180
VHSLLLRIYHNDHILIRMRGGRLMRRRRTAAPSGSEEPRLLLVHERLGVGAAGPEGEGLG
Sbjct: 121 VHSLLLRIYHNDHILIRMRGGRLMRRRRTAAPSGSEEPRLLLVHERLGVGAAGPEGEGLG 180
Query: 181 LLQEAALVPEPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEE 240
LLQEAALVPEPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEE
Sbjct: 181 LLQEAALVPEPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEE 240
Query: 241 SAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKEEKEKDAENKVKNSKGT 294
SAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKEEKEKDAENKVKNSKGT
Sbjct: 241 SAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKEEKEKDAENKVKNSKGT 294
>gi|113430055 PREDICTED: similar to cancer/testis antigen family
147, member B1 isoform 1 [Homo sapiens]
Length = 284
Score = 548 bits (1411), Expect = e-156
Identities = 284/294 (96%), Positives = 284/294 (96%), Gaps = 10/294 (3%)
Query: 1 MSATGDQDLIQEDQEAPVNQEGAQAEAVGDREGGDSGPDSGNTVAGVAGPMRGLGEEEGE 60
MSATGDQDLIQEDQEAPVNQEGAQAEAVGDREGGDSGPDSGNTVAGVAGPMRGLGEEEGE
Sbjct: 1 MSATGDQDLIQEDQEAPVNQEGAQAEAVGDREGGDSGPDSGNTVAGVAGPMRGLGEEEGE 60
Query: 61 QAAGLAAAPGGGNAEEDSEIRIVEEEEEEEEERNEADNFDLVAAARRYPIRGFRMEFLDM 120
QAAGLAAAPGGGNAEEDSEIRIVEEEEEEEE RNEADNFDLVAAARRYPIRGFRMEFLDM
Sbjct: 61 QAAGLAAAPGGGNAEEDSEIRIVEEEEEEEE-RNEADNFDLVAAARRYPIRGFRMEFLDM 119
Query: 121 VHSLLLRIYHNDHILIRMRGGRLMRRRRTAAPSGSEEPRLLLVHERLGVGAAGPEGEGLG 180
VHSLLLRIYHNDHILIRMRGGRLMRRRRTAAPSGSEEPRLLLVHERLGVGAAGPEGEGLG
Sbjct: 120 VHSLLLRIYHNDHILIRMRGGRLMRRRRTAAPSGSEEPRLLLVHERLGVGAAGPEGEGLG 179
Query: 181 LLQEAALVPEPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEE 240
LLQEAALVPEPEVPADLAEMAREPAEEP AEEELAEEAAEEPAKEEPAAEEE
Sbjct: 180 LLQEAALVPEPEVPADLAEMAREPAEEP---------AEEELAEEAAEEPAKEEPAAEEE 230
Query: 241 SAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKEEKEKDAENKVKNSKGT 294
SAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKEEKEKDAENKVKNSKGT
Sbjct: 231 SAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKEEKEKDAENKVKNSKGT 284
>gi|239752405 PREDICTED: similar to cancer/testis antigen family
147, member B1 [Homo sapiens]
Length = 290
Score = 528 bits (1359), Expect = e-150
Identities = 278/297 (93%), Positives = 281/297 (94%), Gaps = 10/297 (3%)
Query: 1 MSATGDQDLIQEDQEAPVNQEGAQAEAVGDREGGDSGPDSGNTVAGVAGPMRGLGEEEGE 60
MSATGDQDLIQEDQEAPVNQEGAQAEA GDREGGDSGPDSGNTVAGVAGPMRGLGEEEGE
Sbjct: 1 MSATGDQDLIQEDQEAPVNQEGAQAEAGGDREGGDSGPDSGNTVAGVAGPMRGLGEEEGE 60
Query: 61 QAAGLAAAPGGGNAEEDSEIRIVEEEEEEEEERNEADNFDLVAAARRYPIRGFRMEFLDM 120
QAAGLAAAPGGGNAEEDSEIRIV EEEEEEEERNEADNFDLVAAARRYPIRGFRMEFLDM
Sbjct: 61 QAAGLAAAPGGGNAEEDSEIRIV-EEEEEEEERNEADNFDLVAAARRYPIRGFRMEFLDM 119
Query: 121 VHSLLLRIYHNDHILIRMRGGRLMRRRRTAAPSGSEEPRLLLVHERLGVGAAGPEGEGLG 180
VHSLLLRIYHNDHILIRMRGGRLM R TAAPSGSEEPRLLLVHERLGVGAAGPEGEGLG
Sbjct: 120 VHSLLLRIYHNDHILIRMRGGRLM-RGXTAAPSGSEEPRLLLVHERLGVGAAGPEGEGLG 178
Query: 181 LLQEAALVPEPEVPADLAEMAREPAEEPAE---EKPTEEAAEEELAEEAAEEPAKEEPAA 237
LLQEAALVPEPEVPADLAEMAREPAEEP E EKPTEEAAEEEL+EEAAEEP KEE AA
Sbjct: 179 LLQEAALVPEPEVPADLAEMAREPAEEPTEEASEKPTEEAAEEELSEEAAEEPRKEESAA 238
Query: 238 EEESAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKEEKEKDAENKVKNSKGT 294
EEESA+EPAT+ EEVTKYQHEKWDEEAQDAAGKEEKEEKEKDAENKVKNSKGT
Sbjct: 239 EEESAQEPATQ-----EEVTKYQHEKWDEEAQDAAGKEEKEEKEKDAENKVKNSKGT 290
>gi|224591404 cancer/testis antigen family 147, member B1 [Homo
sapiens]
Length = 299
Score = 365 bits (937), Expect = e-101
Identities = 208/309 (67%), Positives = 227/309 (73%), Gaps = 25/309 (8%)
Query: 1 MSATGDQDLIQEDQEAPVNQEGAQAEAVG--DREGGDSGPDSGNTV-----AGVAGPMRG 53
MSATGD+ Q DQEAPV+QEGAQAEA G ++EGGDSGPDS + V GVAGP+ G
Sbjct: 1 MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDMVPAAEVVGVAGPVEG 60
Query: 54 LGEEEGEQAAGLAAAPGGGNAEEDSEIRIVEEEEEEEEERNEADNFDLVAAARRYPIRGF 113
LGEEEGEQAAGLAA P GG+AEEDS+I EEEEEEEE NEA NFDL A RRYP G
Sbjct: 61 LGEEEGEQAAGLAAVPQGGSAEEDSDIGPATEEEEEEEEGNEAANFDLAVATRRYPAAGI 120
Query: 114 RMEFLDMVHSLLLRIYHNDHILIRMRG-GRLMRRRRTAAPSGSEEPRLLLVHERLGVGAA 172
FL +VHSLL R+YHNDHI I R RLM A P+ + P LLL+ +RLG GAA
Sbjct: 121 GFVFLYLVHSLLRRLYHNDHIQIANRHLSRLMVGPHAAVPNLWDNPPLLLLSQRLGAGAA 180
Query: 173 GPEGEGLGLL------QEAALVPEPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEA 226
PEGEGLGL+ QEAA VPEP VPADLAEMAREPAEE A+EKP EEAAEE+L EEA
Sbjct: 181 APEGEGLGLIQEAASVQEAASVPEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEEA 240
Query: 227 AEEPAKEEPAAEEESAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKE-EKEKDAE 285
EEPA AEEP +EEA APEEVTK Q EKWDEEAQDAAG+EEKE EKEKD E
Sbjct: 241 TEEPA----------AEEPTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDVE 290
Query: 286 NKVKNSKGT 294
NKVKNSKGT
Sbjct: 291 NKVKNSKGT 299
>gi|121949802 cancer/testis antigen family 47, member A1 [Homo
sapiens]
Length = 288
Score = 338 bits (867), Expect = 3e-93
Identities = 202/305 (66%), Positives = 220/305 (72%), Gaps = 28/305 (9%)
Query: 1 MSATGDQDLIQEDQEAPVNQEGAQAEAVG--DREGGDSGPDSGNTV-----AGVAGPMRG 53
MSATGD+ Q DQEAPV+QEGAQAEA G ++EGGDSGPDS + V GVAGP+ G
Sbjct: 1 MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEG 60
Query: 54 LGEEEGEQAAGLAAAPGGGNAEEDSEIRIVEEEEEEEEERNEADNFDLVAAARRYPIRGF 113
LGEEEGEQAAGLAA P GG+AEEDS+I EEEEEEE NEA NFDL ARRYP G
Sbjct: 61 LGEEEGEQAAGLAAVPRGGSAEEDSDIGPATEEEEEEEG-NEAANFDLAVVARRYPASGI 119
Query: 114 RMEFLDMVHSLLLRIYHNDHILIRMRG-GRLMRRRRTAAPS--GSEEPRLLLVHERLGVG 170
LDMVHSLL R+ HNDHILI R RLM AA + G+ P LL+ +RLG G
Sbjct: 120 HFVLLDMVHSLLHRLSHNDHILIENRQLSRLMVGPHAAARNLWGNLPP--LLLPQRLGAG 177
Query: 171 AAGPEGEGLGLLQEAALVPEPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEP 230
AA GEGLGL+QEAA VPEP VPADLAEMAREPA EEAAEE+L+EEA EEP
Sbjct: 178 AAARAGEGLGLIQEAASVPEPAVPADLAEMAREPA---------EEAAEEKLSEEATEEP 228
Query: 231 AKEEPAAEEESAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKE-EKEKDAENKVK 289
EEPA EEP +EA APEEVTK Q EKWDEEAQDAAG+EEKE EKEKDAENKVK
Sbjct: 229 DAEEPA-----TEEPTAQEATAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDAENKVK 283
Query: 290 NSKGT 294
NSKGT
Sbjct: 284 NSKGT 288
>gi|121949798 cancer/testis antigen family 47, member A2 [Homo
sapiens]
Length = 288
Score = 338 bits (867), Expect = 3e-93
Identities = 202/305 (66%), Positives = 220/305 (72%), Gaps = 28/305 (9%)
Query: 1 MSATGDQDLIQEDQEAPVNQEGAQAEAVG--DREGGDSGPDSGNTV-----AGVAGPMRG 53
MSATGD+ Q DQEAPV+QEGAQAEA G ++EGGDSGPDS + V GVAGP+ G
Sbjct: 1 MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEG 60
Query: 54 LGEEEGEQAAGLAAAPGGGNAEEDSEIRIVEEEEEEEEERNEADNFDLVAAARRYPIRGF 113
LGEEEGEQAAGLAA P GG+AEEDS+I EEEEEEE NEA NFDL ARRYP G
Sbjct: 61 LGEEEGEQAAGLAAVPRGGSAEEDSDIGPATEEEEEEEG-NEAANFDLAVVARRYPASGI 119
Query: 114 RMEFLDMVHSLLLRIYHNDHILIRMRG-GRLMRRRRTAAPS--GSEEPRLLLVHERLGVG 170
LDMVHSLL R+ HNDHILI R RLM AA + G+ P LL+ +RLG G
Sbjct: 120 HFVLLDMVHSLLHRLSHNDHILIENRQLSRLMVGPHAAARNLWGNLPP--LLLPQRLGAG 177
Query: 171 AAGPEGEGLGLLQEAALVPEPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEP 230
AA GEGLGL+QEAA VPEP VPADLAEMAREPA EEAAEE+L+EEA EEP
Sbjct: 178 AAARAGEGLGLIQEAASVPEPAVPADLAEMAREPA---------EEAAEEKLSEEATEEP 228
Query: 231 AKEEPAAEEESAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKE-EKEKDAENKVK 289
EEPA EEP +EA APEEVTK Q EKWDEEAQDAAG+EEKE EKEKDAENKVK
Sbjct: 229 DAEEPA-----TEEPTAQEATAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDAENKVK 283
Query: 290 NSKGT 294
NSKGT
Sbjct: 284 NSKGT 288
>gi|121949773 cancer/testis antigen family 47, member A3 [Homo
sapiens]
Length = 288
Score = 338 bits (867), Expect = 3e-93
Identities = 202/305 (66%), Positives = 220/305 (72%), Gaps = 28/305 (9%)
Query: 1 MSATGDQDLIQEDQEAPVNQEGAQAEAVG--DREGGDSGPDSGNTV-----AGVAGPMRG 53
MSATGD+ Q DQEAPV+QEGAQAEA G ++EGGDSGPDS + V GVAGP+ G
Sbjct: 1 MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEG 60
Query: 54 LGEEEGEQAAGLAAAPGGGNAEEDSEIRIVEEEEEEEEERNEADNFDLVAAARRYPIRGF 113
LGEEEGEQAAGLAA P GG+AEEDS+I EEEEEEE NEA NFDL ARRYP G
Sbjct: 61 LGEEEGEQAAGLAAVPRGGSAEEDSDIGPATEEEEEEEG-NEAANFDLAVVARRYPASGI 119
Query: 114 RMEFLDMVHSLLLRIYHNDHILIRMRG-GRLMRRRRTAAPS--GSEEPRLLLVHERLGVG 170
LDMVHSLL R+ HNDHILI R RLM AA + G+ P LL+ +RLG G
Sbjct: 120 HFVLLDMVHSLLHRLSHNDHILIENRQLSRLMVGPHAAARNLWGNLPP--LLLPQRLGAG 177
Query: 171 AAGPEGEGLGLLQEAALVPEPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEP 230
AA GEGLGL+QEAA VPEP VPADLAEMAREPA EEAAEE+L+EEA EEP
Sbjct: 178 AAARAGEGLGLIQEAASVPEPAVPADLAEMAREPA---------EEAAEEKLSEEATEEP 228
Query: 231 AKEEPAAEEESAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKE-EKEKDAENKVK 289
EEPA EEP +EA APEEVTK Q EKWDEEAQDAAG+EEKE EKEKDAENKVK
Sbjct: 229 DAEEPA-----TEEPTAQEATAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDAENKVK 283
Query: 290 NSKGT 294
NSKGT
Sbjct: 284 NSKGT 288
>gi|121949771 cancer/testis antigen family 47, member A4 [Homo
sapiens]
Length = 288
Score = 338 bits (867), Expect = 3e-93
Identities = 202/305 (66%), Positives = 220/305 (72%), Gaps = 28/305 (9%)
Query: 1 MSATGDQDLIQEDQEAPVNQEGAQAEAVG--DREGGDSGPDSGNTV-----AGVAGPMRG 53
MSATGD+ Q DQEAPV+QEGAQAEA G ++EGGDSGPDS + V GVAGP+ G
Sbjct: 1 MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEG 60
Query: 54 LGEEEGEQAAGLAAAPGGGNAEEDSEIRIVEEEEEEEEERNEADNFDLVAAARRYPIRGF 113
LGEEEGEQAAGLAA P GG+AEEDS+I EEEEEEE NEA NFDL ARRYP G
Sbjct: 61 LGEEEGEQAAGLAAVPRGGSAEEDSDIGPATEEEEEEEG-NEAANFDLAVVARRYPASGI 119
Query: 114 RMEFLDMVHSLLLRIYHNDHILIRMRG-GRLMRRRRTAAPS--GSEEPRLLLVHERLGVG 170
LDMVHSLL R+ HNDHILI R RLM AA + G+ P LL+ +RLG G
Sbjct: 120 HFVLLDMVHSLLHRLSHNDHILIENRQLSRLMVGPHAAARNLWGNLPP--LLLPQRLGAG 177
Query: 171 AAGPEGEGLGLLQEAALVPEPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEP 230
AA GEGLGL+QEAA VPEP VPADLAEMAREPA EEAAEE+L+EEA EEP
Sbjct: 178 AAARAGEGLGLIQEAASVPEPAVPADLAEMAREPA---------EEAAEEKLSEEATEEP 228
Query: 231 AKEEPAAEEESAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKE-EKEKDAENKVK 289
EEPA EEP +EA APEEVTK Q EKWDEEAQDAAG+EEKE EKEKDAENKVK
Sbjct: 229 DAEEPA-----TEEPTAQEATAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDAENKVK 283
Query: 290 NSKGT 294
NSKGT
Sbjct: 284 NSKGT 288
>gi|121949796 cancer/testis antigen family 47, member A5 [Homo
sapiens]
Length = 288
Score = 338 bits (867), Expect = 3e-93
Identities = 202/305 (66%), Positives = 220/305 (72%), Gaps = 28/305 (9%)
Query: 1 MSATGDQDLIQEDQEAPVNQEGAQAEAVG--DREGGDSGPDSGNTV-----AGVAGPMRG 53
MSATGD+ Q DQEAPV+QEGAQAEA G ++EGGDSGPDS + V GVAGP+ G
Sbjct: 1 MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEG 60
Query: 54 LGEEEGEQAAGLAAAPGGGNAEEDSEIRIVEEEEEEEEERNEADNFDLVAAARRYPIRGF 113
LGEEEGEQAAGLAA P GG+AEEDS+I EEEEEEE NEA NFDL ARRYP G
Sbjct: 61 LGEEEGEQAAGLAAVPRGGSAEEDSDIGPATEEEEEEEG-NEAANFDLAVVARRYPASGI 119
Query: 114 RMEFLDMVHSLLLRIYHNDHILIRMRG-GRLMRRRRTAAPS--GSEEPRLLLVHERLGVG 170
LDMVHSLL R+ HNDHILI R RLM AA + G+ P LL+ +RLG G
Sbjct: 120 HFVLLDMVHSLLHRLSHNDHILIENRQLSRLMVGPHAAARNLWGNLPP--LLLPQRLGAG 177
Query: 171 AAGPEGEGLGLLQEAALVPEPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEP 230
AA GEGLGL+QEAA VPEP VPADLAEMAREPA EEAAEE+L+EEA EEP
Sbjct: 178 AAARAGEGLGLIQEAASVPEPAVPADLAEMAREPA---------EEAAEEKLSEEATEEP 228
Query: 231 AKEEPAAEEESAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKE-EKEKDAENKVK 289
EEPA EEP +EA APEEVTK Q EKWDEEAQDAAG+EEKE EKEKDAENKVK
Sbjct: 229 DAEEPA-----TEEPTAQEATAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDAENKVK 283
Query: 290 NSKGT 294
NSKGT
Sbjct: 284 NSKGT 288
>gi|121949794 cancer/testis antigen family 47, member A6 [Homo
sapiens]
Length = 288
Score = 338 bits (867), Expect = 3e-93
Identities = 202/305 (66%), Positives = 220/305 (72%), Gaps = 28/305 (9%)
Query: 1 MSATGDQDLIQEDQEAPVNQEGAQAEAVG--DREGGDSGPDSGNTV-----AGVAGPMRG 53
MSATGD+ Q DQEAPV+QEGAQAEA G ++EGGDSGPDS + V GVAGP+ G
Sbjct: 1 MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEG 60
Query: 54 LGEEEGEQAAGLAAAPGGGNAEEDSEIRIVEEEEEEEEERNEADNFDLVAAARRYPIRGF 113
LGEEEGEQAAGLAA P GG+AEEDS+I EEEEEEE NEA NFDL ARRYP G
Sbjct: 61 LGEEEGEQAAGLAAVPRGGSAEEDSDIGPATEEEEEEEG-NEAANFDLAVVARRYPASGI 119
Query: 114 RMEFLDMVHSLLLRIYHNDHILIRMRG-GRLMRRRRTAAPS--GSEEPRLLLVHERLGVG 170
LDMVHSLL R+ HNDHILI R RLM AA + G+ P LL+ +RLG G
Sbjct: 120 HFVLLDMVHSLLHRLSHNDHILIENRQLSRLMVGPHAAARNLWGNLPP--LLLPQRLGAG 177
Query: 171 AAGPEGEGLGLLQEAALVPEPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEP 230
AA GEGLGL+QEAA VPEP VPADLAEMAREPA EEAAEE+L+EEA EEP
Sbjct: 178 AAARAGEGLGLIQEAASVPEPAVPADLAEMAREPA---------EEAAEEKLSEEATEEP 228
Query: 231 AKEEPAAEEESAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKE-EKEKDAENKVK 289
EEPA EEP +EA APEEVTK Q EKWDEEAQDAAG+EEKE EKEKDAENKVK
Sbjct: 229 DAEEPA-----TEEPTAQEATAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDAENKVK 283
Query: 290 NSKGT 294
NSKGT
Sbjct: 284 NSKGT 288
>gi|121949792 cancer/testis antigen family 47, member A7 [Homo
sapiens]
Length = 288
Score = 338 bits (867), Expect = 3e-93
Identities = 202/305 (66%), Positives = 220/305 (72%), Gaps = 28/305 (9%)
Query: 1 MSATGDQDLIQEDQEAPVNQEGAQAEAVG--DREGGDSGPDSGNTV-----AGVAGPMRG 53
MSATGD+ Q DQEAPV+QEGAQAEA G ++EGGDSGPDS + V GVAGP+ G
Sbjct: 1 MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEG 60
Query: 54 LGEEEGEQAAGLAAAPGGGNAEEDSEIRIVEEEEEEEEERNEADNFDLVAAARRYPIRGF 113
LGEEEGEQAAGLAA P GG+AEEDS+I EEEEEEE NEA NFDL ARRYP G
Sbjct: 61 LGEEEGEQAAGLAAVPRGGSAEEDSDIGPATEEEEEEEG-NEAANFDLAVVARRYPASGI 119
Query: 114 RMEFLDMVHSLLLRIYHNDHILIRMRG-GRLMRRRRTAAPS--GSEEPRLLLVHERLGVG 170
LDMVHSLL R+ HNDHILI R RLM AA + G+ P LL+ +RLG G
Sbjct: 120 HFVLLDMVHSLLHRLSHNDHILIENRQLSRLMVGPHAAARNLWGNLPP--LLLPQRLGAG 177
Query: 171 AAGPEGEGLGLLQEAALVPEPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEP 230
AA GEGLGL+QEAA VPEP VPADLAEMAREPA EEAAEE+L+EEA EEP
Sbjct: 178 AAARAGEGLGLIQEAASVPEPAVPADLAEMAREPA---------EEAAEEKLSEEATEEP 228
Query: 231 AKEEPAAEEESAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKE-EKEKDAENKVK 289
EEPA EEP +EA APEEVTK Q EKWDEEAQDAAG+EEKE EKEKDAENKVK
Sbjct: 229 DAEEPA-----TEEPTAQEATAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDAENKVK 283
Query: 290 NSKGT 294
NSKGT
Sbjct: 284 NSKGT 288
>gi|121949790 cancer/testis antigen family 47, member A8 [Homo
sapiens]
Length = 288
Score = 338 bits (867), Expect = 3e-93
Identities = 202/305 (66%), Positives = 220/305 (72%), Gaps = 28/305 (9%)
Query: 1 MSATGDQDLIQEDQEAPVNQEGAQAEAVG--DREGGDSGPDSGNTV-----AGVAGPMRG 53
MSATGD+ Q DQEAPV+QEGAQAEA G ++EGGDSGPDS + V GVAGP+ G
Sbjct: 1 MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEG 60
Query: 54 LGEEEGEQAAGLAAAPGGGNAEEDSEIRIVEEEEEEEEERNEADNFDLVAAARRYPIRGF 113
LGEEEGEQAAGLAA P GG+AEEDS+I EEEEEEE NEA NFDL ARRYP G
Sbjct: 61 LGEEEGEQAAGLAAVPRGGSAEEDSDIGPATEEEEEEEG-NEAANFDLAVVARRYPASGI 119
Query: 114 RMEFLDMVHSLLLRIYHNDHILIRMRG-GRLMRRRRTAAPS--GSEEPRLLLVHERLGVG 170
LDMVHSLL R+ HNDHILI R RLM AA + G+ P LL+ +RLG G
Sbjct: 120 HFVLLDMVHSLLHRLSHNDHILIENRQLSRLMVGPHAAARNLWGNLPP--LLLPQRLGAG 177
Query: 171 AAGPEGEGLGLLQEAALVPEPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEP 230
AA GEGLGL+QEAA VPEP VPADLAEMAREPA EEAAEE+L+EEA EEP
Sbjct: 178 AAARAGEGLGLIQEAASVPEPAVPADLAEMAREPA---------EEAAEEKLSEEATEEP 228
Query: 231 AKEEPAAEEESAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKE-EKEKDAENKVK 289
EEPA EEP +EA APEEVTK Q EKWDEEAQDAAG+EEKE EKEKDAENKVK
Sbjct: 229 DAEEPA-----TEEPTAQEATAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDAENKVK 283
Query: 290 NSKGT 294
NSKGT
Sbjct: 284 NSKGT 288
>gi|121949788 cancer/testis antigen family 47, member A9 [Homo
sapiens]
Length = 288
Score = 338 bits (867), Expect = 3e-93
Identities = 202/305 (66%), Positives = 220/305 (72%), Gaps = 28/305 (9%)
Query: 1 MSATGDQDLIQEDQEAPVNQEGAQAEAVG--DREGGDSGPDSGNTV-----AGVAGPMRG 53
MSATGD+ Q DQEAPV+QEGAQAEA G ++EGGDSGPDS + V GVAGP+ G
Sbjct: 1 MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEG 60
Query: 54 LGEEEGEQAAGLAAAPGGGNAEEDSEIRIVEEEEEEEEERNEADNFDLVAAARRYPIRGF 113
LGEEEGEQAAGLAA P GG+AEEDS+I EEEEEEE NEA NFDL ARRYP G
Sbjct: 61 LGEEEGEQAAGLAAVPRGGSAEEDSDIGPATEEEEEEEG-NEAANFDLAVVARRYPASGI 119
Query: 114 RMEFLDMVHSLLLRIYHNDHILIRMRG-GRLMRRRRTAAPS--GSEEPRLLLVHERLGVG 170
LDMVHSLL R+ HNDHILI R RLM AA + G+ P LL+ +RLG G
Sbjct: 120 HFVLLDMVHSLLHRLSHNDHILIENRQLSRLMVGPHAAARNLWGNLPP--LLLPQRLGAG 177
Query: 171 AAGPEGEGLGLLQEAALVPEPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEP 230
AA GEGLGL+QEAA VPEP VPADLAEMAREPA EEAAEE+L+EEA EEP
Sbjct: 178 AAARAGEGLGLIQEAASVPEPAVPADLAEMAREPA---------EEAAEEKLSEEATEEP 228
Query: 231 AKEEPAAEEESAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKE-EKEKDAENKVK 289
EEPA EEP +EA APEEVTK Q EKWDEEAQDAAG+EEKE EKEKDAENKVK
Sbjct: 229 DAEEPA-----TEEPTAQEATAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDAENKVK 283
Query: 290 NSKGT 294
NSKGT
Sbjct: 284 NSKGT 288
>gi|121949786 cancer/testis antigen family 47, member A10 [Homo
sapiens]
Length = 288
Score = 338 bits (867), Expect = 3e-93
Identities = 202/305 (66%), Positives = 220/305 (72%), Gaps = 28/305 (9%)
Query: 1 MSATGDQDLIQEDQEAPVNQEGAQAEAVG--DREGGDSGPDSGNTV-----AGVAGPMRG 53
MSATGD+ Q DQEAPV+QEGAQAEA G ++EGGDSGPDS + V GVAGP+ G
Sbjct: 1 MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEG 60
Query: 54 LGEEEGEQAAGLAAAPGGGNAEEDSEIRIVEEEEEEEEERNEADNFDLVAAARRYPIRGF 113
LGEEEGEQAAGLAA P GG+AEEDS+I EEEEEEE NEA NFDL ARRYP G
Sbjct: 61 LGEEEGEQAAGLAAVPRGGSAEEDSDIGPATEEEEEEEG-NEAANFDLAVVARRYPASGI 119
Query: 114 RMEFLDMVHSLLLRIYHNDHILIRMRG-GRLMRRRRTAAPS--GSEEPRLLLVHERLGVG 170
LDMVHSLL R+ HNDHILI R RLM AA + G+ P LL+ +RLG G
Sbjct: 120 HFVLLDMVHSLLHRLSHNDHILIENRQLSRLMVGPHAAARNLWGNLPP--LLLPQRLGAG 177
Query: 171 AAGPEGEGLGLLQEAALVPEPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEP 230
AA GEGLGL+QEAA VPEP VPADLAEMAREPA EEAAEE+L+EEA EEP
Sbjct: 178 AAARAGEGLGLIQEAASVPEPAVPADLAEMAREPA---------EEAAEEKLSEEATEEP 228
Query: 231 AKEEPAAEEESAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKE-EKEKDAENKVK 289
EEPA EEP +EA APEEVTK Q EKWDEEAQDAAG+EEKE EKEKDAENKVK
Sbjct: 229 DAEEPA-----TEEPTAQEATAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDAENKVK 283
Query: 290 NSKGT 294
NSKGT
Sbjct: 284 NSKGT 288
>gi|122114660 cancer/testis antigen family 47, member A11 [Homo
sapiens]
Length = 288
Score = 338 bits (867), Expect = 3e-93
Identities = 202/305 (66%), Positives = 220/305 (72%), Gaps = 28/305 (9%)
Query: 1 MSATGDQDLIQEDQEAPVNQEGAQAEAVG--DREGGDSGPDSGNTV-----AGVAGPMRG 53
MSATGD+ Q DQEAPV+QEGAQAEA G ++EGGDSGPDS + V GVAGP+ G
Sbjct: 1 MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEG 60
Query: 54 LGEEEGEQAAGLAAAPGGGNAEEDSEIRIVEEEEEEEEERNEADNFDLVAAARRYPIRGF 113
LGEEEGEQAAGLAA P GG+AEEDS+I EEEEEEE NEA NFDL ARRYP G
Sbjct: 61 LGEEEGEQAAGLAAVPRGGSAEEDSDIGPATEEEEEEEG-NEAANFDLAVVARRYPASGI 119
Query: 114 RMEFLDMVHSLLLRIYHNDHILIRMRG-GRLMRRRRTAAPS--GSEEPRLLLVHERLGVG 170
LDMVHSLL R+ HNDHILI R RLM AA + G+ P LL+ +RLG G
Sbjct: 120 HFVLLDMVHSLLHRLSHNDHILIENRQLSRLMVGPHAAARNLWGNLPP--LLLPQRLGAG 177
Query: 171 AAGPEGEGLGLLQEAALVPEPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEP 230
AA GEGLGL+QEAA VPEP VPADLAEMAREPA EEAAEE+L+EEA EEP
Sbjct: 178 AAARAGEGLGLIQEAASVPEPAVPADLAEMAREPA---------EEAAEEKLSEEATEEP 228
Query: 231 AKEEPAAEEESAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKE-EKEKDAENKVK 289
EEPA EEP +EA APEEVTK Q EKWDEEAQDAAG+EEKE EKEKDAENKVK
Sbjct: 229 DAEEPA-----TEEPTAQEATAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDAENKVK 283
Query: 290 NSKGT 294
NSKGT
Sbjct: 284 NSKGT 288
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 63.5 bits (153), Expect = 2e-10
Identities = 76/282 (26%), Positives = 100/282 (35%), Gaps = 59/282 (20%)
Query: 12 EDQEAPVNQEGAQAEAVGDREGGDSGPDSGNTVAGVAGPMRGLGEEEGEQAAGLAAAPGG 71
E +E EG + E G+ E G+ + G G G GEEEGE+ G G
Sbjct: 825 EREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGE-EGEGEEEGEEGEGEGEEEEG 883
Query: 72 -GNAEEDSEIRIVEEE-----EEEEEERNEADNFDLVAAARRYPIRGFRMEFLDMVHSLL 125
G EE+ E EEE EEE E E + +
Sbjct: 884 EGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGE------------------------- 918
Query: 126 LRIYHNDHILIRMRGGRLMRRRRTAAPSGSEEPRLLLVHERLGVGAAGPEGEGLGLLQEA 185
G+ G EE G G G +GEG G +E
Sbjct: 919 ---------------GKGEEEGEEGEGEGEEEE---------GEGE-GEDGEGEGEEEEG 953
Query: 186 ALVPEPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEESAEEP 245
E E E E E E + EE E E EE EE +EE EEE E
Sbjct: 954 EWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEG 1013
Query: 246 ATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKEEKEKDAENK 287
EE E + + E+ + E ++ G+EE EE+EK+ E +
Sbjct: 1014 EEEEEGEVE--GEVEGEEGEGEGEEEEGEEEGEEREKEGEGE 1053
Score = 55.8 bits (133), Expect = 4e-08
Identities = 74/298 (24%), Positives = 94/298 (31%), Gaps = 77/298 (25%)
Query: 11 QEDQEAPVNQEGAQAEAVGDREGGDSGPDSGNTVAGVAGPMRGLGEEEGEQAAGLAAAPG 70
+E +E +EG + E G+ E G+ + G G GEEEGE G
Sbjct: 860 EEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEG--EEEEG 917
Query: 71 GGNAEEDSEIRIVEEEEEEEEERNEADNFDLVAAARRYPIRGFRMEFLDMVHSLLLRIYH 130
G EE+ E E E E EEE E + D
Sbjct: 918 EGKGEEEGE----EGEGEGEEEEGEGEGED------------------------------ 943
Query: 131 NDHILIRMRGGRLMRRRRTAAPSGSEEPRLLLVHERLGVGAAGPEGEGLGLLQEAALVPE 190
G EE E G G EGEG G E
Sbjct: 944 -------------------GEGEGEEEEGEWEGEEEEGEGEGEEEGEGEG--------EE 976
Query: 191 PEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEP-----------AKEEPAAEE 239
E + E E EE EE+ EE EE E EE + E EE
Sbjct: 977 GEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEE 1036
Query: 240 ESAEEPATE---EAAAPEEVTKYQHEKWDEEAQDAAGKEEKEEKEKDAENKVKNSKGT 294
E EE E E E + E+ +E G+EE E ++ + KV KG+
Sbjct: 1037 EEGEEEGEEREKEGEGEENRRNREEEEEEEGKYQETGEEENERQDGEEYKKVSKIKGS 1094
Score = 48.5 bits (114), Expect = 7e-06
Identities = 67/293 (22%), Positives = 102/293 (34%), Gaps = 37/293 (12%)
Query: 5 GDQDLIQEDQEAPVNQEGAQAEAVGDREGGDSGPDSGNTVAGVAGPMRGLGEEEGEQAAG 64
G++ +E ++ + + E G+ E G+ + G+ G E EGE+ G
Sbjct: 707 GEEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEG 766
Query: 65 LAAAPGGGNAEEDSEIRIVEEEEEEEEERNEADNFDLVAAARRYPIRGFRMEFLDMVHSL 124
G +E+ + EE+ EEE ++ E + + RG E V
Sbjct: 767 EREKEEGERKKEERAGK--EEKGEEEGDQGEGEEEETEG-------RGEEKEEGGEVEGG 817
Query: 125 LLRIYHNDHILIRMRGGRLMRRRRTAAPSGSEEPRLLLVHERLGVGAAGPEGEGLGLLQE 184
+ G+ R G EE G E EG G +E
Sbjct: 818 ------------EVEEGKGEREEEEEEGEGEEEE------------GEGEEEEGEGEEEE 853
Query: 185 AALVPEPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEE----PAKEEPAAEEE 240
E E E E E EE+ E EEE E EE +EE E E
Sbjct: 854 GEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGE 913
Query: 241 SAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKEEKEKDAENKVKNSKG 293
E E E + + E+ + E +D G+ E+EE E + E + +G
Sbjct: 914 EEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEG 966
Score = 39.3 bits (90), Expect = 0.004
Identities = 29/97 (29%), Positives = 40/97 (41%), Gaps = 4/97 (4%)
Query: 5 GDQDLIQEDQEAPVNQEGAQAEAVGDREGGDS----GPDSGNTVAGVAGPMRGLGEEEGE 60
G+ + +E+ E +EG + E G+ E G+ G G G GE EGE
Sbjct: 908 GEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGE 967
Query: 61 QAAGLAAAPGGGNAEEDSEIRIVEEEEEEEEERNEAD 97
+ G G EE+ EEEE EEE E +
Sbjct: 968 EEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGE 1004
Score = 38.9 bits (89), Expect = 0.005
Identities = 35/137 (25%), Positives = 58/137 (42%), Gaps = 11/137 (8%)
Query: 167 LGVGAAGPEGEGLGLLQEAALVPEP---------EVPADLAEMAR--EPAEEPAEEKPTE 215
+G GPEG G G +E + E E EM R E +E AE++ +
Sbjct: 644 VGEAEDGPEGRGDGTCEEGSSGAEHWQDEEREKGEKDKGRGEMERPGEGEKELAEKEEWK 703
Query: 216 EAAEEELAEEAAEEPAKEEPAAEEESAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKE 275
+ EE ++ E+ ++E E E E E E + + EK E ++ G+E
Sbjct: 704 KRDGEEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEE 763
Query: 276 EKEEKEKDAENKVKNSK 292
+ E+EK+ + K +
Sbjct: 764 VEGEREKEEGERKKEER 780
Score = 35.0 bits (79), Expect = 0.079
Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Query: 5 GDQDLIQEDQEAPVNQEGAQAEAVGDREG-GDSGPDSGNTVAGVAGPMRGLGE---EEGE 60
G+++ + + E +E + E G+ EG G+ + V G G GE EEGE
Sbjct: 981 GEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGE 1040
Query: 61 QAAGLAAAPGGGNAEEDSEIRIVEEEEE--------EEEERNEADNFDLVA 103
+ G G EE+ R EEEEE EE ER + + + V+
Sbjct: 1041 EEGEEREKEGEG--EENRRNREEEEEEEGKYQETGEEENERQDGEEYKKVS 1089
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 57.4 bits (137), Expect = 1e-08
Identities = 42/120 (35%), Positives = 58/120 (48%), Gaps = 7/120 (5%)
Query: 171 AAGPEGEGLGLLQEAALVPEPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEP 230
A G E E E A PE E + + E A+ PAE + EK ++ E + E A+ P
Sbjct: 494 AEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSP 553
Query: 231 AKEEPAAEEESAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKEEKEKDAENKVKN 290
AKEE + E A+ P EEA +P EV K E+A+ A +E K E + K K+
Sbjct: 554 AKEEAKSPPE-AKSPEKEEAKSPAEV------KSPEKAKSPAKEEAKSPAEAKSPEKAKS 606
Score = 50.8 bits (120), Expect = 1e-06
Identities = 37/89 (41%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 206 EEPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEESAE-------EPATEEAAAPEEVTK 258
E+ E + TEE EEE +EA EE KEE EEE AE P EEAA+PE+ K
Sbjct: 459 EQTEETQVTEEVTEEE-EKEAKEEEGKEEEGGEEEEAEGGEEETKSPPAEEAASPEKEAK 517
Query: 259 YQHEKWDEEAQDAAGKEEKEEKEKDAENK 287
K + ++ A EKEE + AE K
Sbjct: 518 -SPVKEEAKSPAEAKSPEKEEAKSPAEVK 545
Score = 49.7 bits (117), Expect = 3e-06
Identities = 47/163 (28%), Positives = 73/163 (44%), Gaps = 29/163 (17%)
Query: 151 APSGSEEPRLLLVHERLGVGAAGPEGEGLGLLQEAALVP---------EPEVPADLA--E 199
A G EE + E AA PE E ++E A P E + PA++ E
Sbjct: 494 AEGGEEETKSPPAEE-----AASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPE 548
Query: 200 MAREPAEEPAEEKPTEEAAEEELAE--------EAAEEPAKEEP-----AAEEESAEEPA 246
A+ PA+E A+ P ++ E+E A+ E A+ PAKEE A E A+ P
Sbjct: 549 KAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPV 608
Query: 247 TEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKEEKEKDAENKVK 289
EEA +P E E+ A+ + ++ K +++A++ K
Sbjct: 609 KEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEK 651
Score = 49.3 bits (116), Expect = 4e-06
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 183 QEAALVPEPEVPADLAEMAREPAEEPA--EEKPTEEAAEEELAEEAAEE---PAKEEPAA 237
+E +V E + E E E+ A EE EE EEE AE EE P EE A+
Sbjct: 452 KETVIVEEQTEETQVTEEVTEEEEKEAKEEEGKEEEGGEEEEAEGGEEETKSPPAEEAAS 511
Query: 238 EEESAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKEEKEKDAEN 286
E+ A+ P EEA +P E + E+ A+ + ++ K +++A++
Sbjct: 512 PEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKS 560
Score = 47.4 bits (111), Expect = 2e-05
Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 9/115 (7%)
Query: 183 QEAALVPEPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEES- 241
+EA PE + P E A+ PAE + EK A EE + A+ P K + +EE+
Sbjct: 556 EEAKSPPEAKSPEK--EEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAK 613
Query: 242 ----AEEPATEEAAAPEEVTKYQHEK--WDEEAQDAAGKEEKEEKEKDAENKVKN 290
A+ P EEA +P EV + K EEA+ + E++E + K K+
Sbjct: 614 SPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKS 668
Score = 47.0 bits (110), Expect = 2e-05
Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 5/120 (4%)
Query: 171 AAGPEGEGLGLLQEAALVPEPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEP 230
A PE + +EA E + P + E A+ PAE + EK EE + E A+ P
Sbjct: 598 AKSPEKAKSPVKEEAKSPAEAKSP--VKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSP 655
Query: 231 AKEEPAAEEESAEEPATEEAAAPEEV-TKYQHEKWDEEAQDAAGKEEKEEKEKDAENKVK 289
KEE A E A+ P EA +PE+ + + E E + KEE + EK A++ VK
Sbjct: 656 EKEE-AKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEK-AKSPVK 713
Score = 47.0 bits (110), Expect = 2e-05
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Query: 189 PEPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEPAKEEPA---AEEESAEEP 245
P+ E P E +EPA E +E E EE ++ P KE PA +E++ +
Sbjct: 865 PKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKE 924
Query: 246 ATEEAAAPEEVTKYQHEKWDEEAQDAAG--KEEKEEKEKDAENKVK 289
TE A + K + E ++AA K+ KEEK K E K K
Sbjct: 925 KTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPEEKPK 970
Score = 46.6 bits (109), Expect = 3e-05
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 8/108 (7%)
Query: 182 LQEAALVPEPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEES 241
L+E A PE E+P E + P +E EEKP +E +E ++A EE A P EE
Sbjct: 803 LKEDAKAPEKEIPK--KEEVKSPVKE--EEKP-QEVKVKEPPKKAEEEKAPATPKTEE-- 855
Query: 242 AEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKEEKEKDAENKVK 289
++ + +E A +E K + E+ E A + + + E K+++AE+K K
Sbjct: 856 -KKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKK 902
Score = 43.9 bits (102), Expect = 2e-04
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Query: 199 EMAREPAEEPAE--EKPTEEAAEEELAEEAAEEPAKEEPAAEEESAEEPATEEAAAPEEV 256
E A+ P +E A+ EK EE + E A+ P KEE A E A+ P EEA +PE+
Sbjct: 692 EKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEE-AKTPEKAKSPVKEEAKSPEKA 750
Query: 257 TKYQHEKWDEEAQDAAGKEEKEEKEKDAENKVKNSK 292
+ K + A KEE A+ + +K
Sbjct: 751 KSPEKAKTLDVKSPEAKTPAKEEARSPADKFPEKAK 786
Score = 43.5 bits (101), Expect = 2e-04
Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 8/108 (7%)
Query: 190 EPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEPAKEE---PAAE-EESAEEP 245
E + P +E A+ P + K E+A ++ A+ PAKEE PA + E A+ P
Sbjct: 729 EAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPADKFPEKAKSP 788
Query: 246 ATEEAAAPEEVTKYQHEKWDEEAQDAAGKEE----KEEKEKDAENKVK 289
EE +PE+ E ++ KEE +E+EK E KVK
Sbjct: 789 VKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVK 836
Score = 43.1 bits (100), Expect = 3e-04
Identities = 36/93 (38%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 199 EMAREPAEEPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEESAEEPATEEAAAPEEVTK 258
E E EE + P EEAA E + A+ P KEE + E A+ P EEA +P EV
Sbjct: 491 EEEAEGGEEETKSPPAEEAASPE---KEAKSPVKEEAKSPAE-AKSPEKEEAKSPAEVKS 546
Query: 259 YQHEK--WDEEAQD--AAGKEEKEEKEKDAENK 287
+ K EEA+ A EKEE + AE K
Sbjct: 547 PEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVK 579
Score = 43.1 bits (100), Expect = 3e-04
Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 12/120 (10%)
Query: 171 AAGPEGEGLGLLQEAALVPEPEVPADLAEMAREPAEEPAEEK-PTEEAAEEELAEEAAEE 229
A PE E + + V E E P ++ +EP ++ EEK P EE+ + E
Sbjct: 807 AKAPEKEIPKKEEVKSPVKEEEKPQEVK--VKEPPKKAEEEKAPATPKTEEKKDSKKEEA 864
Query: 230 PAKEEPAAEEESAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKEEKEKDAENKVK 289
P KE P + E +EPA E+ P+E +K + +K EEA+D K++ EK+A KV+
Sbjct: 865 PKKEAPKPKVEEKKEPAVEK---PKE-SKVEAKK--EEAED---KKKVPTPEKEAPAKVE 915
Score = 42.7 bits (99), Expect = 4e-04
Identities = 42/129 (32%), Positives = 55/129 (42%), Gaps = 24/129 (18%)
Query: 188 VPEPEVPADLAEMAREPAEE--------PAEEKPTEEAAEEELAEEAA----EEPAKEE- 234
V PE E AR PA++ EE + E A+ L E+A E P KEE
Sbjct: 761 VKSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEV 820
Query: 235 --PAAEEESAEEPATEEAAAPEE-----VTKYQHEKWDEEAQDAAGKE----EKEEKEKD 283
P EEE +E +E E T EK D + ++A KE + EEK++
Sbjct: 821 KSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEP 880
Query: 284 AENKVKNSK 292
A K K SK
Sbjct: 881 AVEKPKESK 889
Score = 39.3 bits (90), Expect = 0.004
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
Query: 183 QEAALVPEPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEP----AKE--EPA 236
+E+ + + E D ++ E PA+ + E+A +E E A +EP AKE +PA
Sbjct: 886 KESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPA 945
Query: 237 AEEESAEE---PATEEAAAPEE--VTKYQHEKWDEEAQDAAGKEEKEEKEKDAENKVKNS 291
++E+A E E+A PEE T+ + ++ D+ K + E+ EK + K+S
Sbjct: 946 EKKEAAPEKKDTKEEKAKKPEEKPKTEAKAKEDDKTLSKEPSKPKAEKAEKSSSTDQKDS 1005
Query: 292 K 292
K
Sbjct: 1006 K 1006
Score = 38.5 bits (88), Expect = 0.007
Identities = 38/121 (31%), Positives = 56/121 (46%), Gaps = 22/121 (18%)
Query: 194 PADLAEMAREPAEEPAEEK--------PTEEAAE---EELAEEAAEEPAKEEPAAEEESA 242
P AE + PA EEK P +EA + EE E A E+P + + A++E A
Sbjct: 838 PPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEA 897
Query: 243 EEP---ATEEAAAPEEV-------TKYQHEKWDEEAQDAAGKE-EKEEKEKDAENKVKNS 291
E+ T E AP +V K + E +E DA KE K ++K+A + K++
Sbjct: 898 EDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDT 957
Query: 292 K 292
K
Sbjct: 958 K 958
Score = 37.7 bits (86), Expect = 0.012
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
Query: 188 VPEPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEE--ESAEEP 245
V EP A+ + P E ++ EEA ++E + EE K+EPA E+ ES E
Sbjct: 835 VKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEE--KKEPAVEKPKESKVEA 892
Query: 246 ATEEAAAPEEVTKYQHE--KWDEEAQDAAGKEEKEEKEKDAEN 286
EEA ++V + E E +DA KE+ E +K+ ++
Sbjct: 893 KKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDD 935
Score = 37.4 bits (85), Expect = 0.016
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Query: 183 QEAALVPEPEVPADLAEMAREPAEEPAEEKPTEEAA----EEELAEEAAEEPAKEEPAAE 238
+EA E + P A+E A+ PAE K E+A EE + A+ P KEE +
Sbjct: 570 EEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSP 629
Query: 239 EESAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKEEKEKDAENKVK 289
E + P ++ EE + K E+ + + ++ K + +A++ K
Sbjct: 630 AE-VKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEK 679
Score = 36.6 bits (83), Expect = 0.027
Identities = 31/113 (27%), Positives = 59/113 (52%), Gaps = 16/113 (14%)
Query: 188 VPEPEVPADLAEMAR-EP----AEEPAEEKPTEEAAEE--ELAEEAAEEPAKEEPAAEEE 240
V E P + E+A+ EP A+EP++ +EAA E + EE A++P +E+P E +
Sbjct: 916 VKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKAKKP-EEKPKTEAK 974
Query: 241 SAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKEEKEKDAENKVKNSKG 293
+ E+ T ++K + E+A+ ++ ++K+ K + + K +KG
Sbjct: 975 AKEDDKT--------LSKEPSKPKAEKAEKSSSTDQKDSKPPEKATEDKAAKG 1019
Score = 36.2 bits (82), Expect = 0.035
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 227 AEEPAKEEPAAEEESA-EEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKEEKEKDAE 285
+EE K +E+E+ E TEE EEVT E+ ++EA++ GKEE+ +E++AE
Sbjct: 440 SEEKIKVVEKSEKETVIVEEQTEETQVTEEVT----EEEEKEAKEEEGKEEEGGEEEEAE 495
Query: 286 NKVKNSK 292
+ +K
Sbjct: 496 GGEEETK 502
Score = 33.1 bits (74), Expect = 0.30
Identities = 29/126 (23%), Positives = 49/126 (38%), Gaps = 7/126 (5%)
Query: 171 AAGPEGEGLGLLQEAALVPEPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEP 230
A PE +EA + + P + E A+ P + + + +E A+ P
Sbjct: 646 AKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSP 705
Query: 231 AK-----EEPAAEEESAEEPATEEAAAPEEVTK--YQHEKWDEEAQDAAGKEEKEEKEKD 283
K +E A E A+ P EEA PE+ + K E+A+ + + K +
Sbjct: 706 EKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPE 765
Query: 284 AENKVK 289
A+ K
Sbjct: 766 AKTPAK 771
Score = 32.0 bits (71), Expect = 0.67
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 8/79 (10%)
Query: 211 EKPTEEAAEEELAEEAAEEPAKEEPAAEEESAEEPATEEAAAPEEVTKYQHEKWDEEAQD 270
EK T E+ + EE +EE E+E+ EE EE EE + EE
Sbjct: 451 EKETVIVEEQTEETQVTEEVTEEE---EKEAKEEEGKEEEGGEEE-----EAEGGEEETK 502
Query: 271 AAGKEEKEEKEKDAENKVK 289
+ EE EK+A++ VK
Sbjct: 503 SPPAEEAASPEKEAKSPVK 521
>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1
[Homo sapiens]
Length = 916
Score = 57.4 bits (137), Expect = 1e-08
Identities = 71/270 (26%), Positives = 114/270 (42%), Gaps = 23/270 (8%)
Query: 20 QEGAQAEAVG--DREGGDSGPDSGNTVAGVAGPMRGLGEEEGEQAAGLAAAPGGGNAEED 77
+EG + E G + E D G S G + +EEGEQ G A G E
Sbjct: 523 EEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEA 582
Query: 78 SEIRIVEEEEEEEEERNEADNFDLVAAARRYPIRGFRMEFLDMVHSLLLRIYHNDHILIR 137
E + VEE+ EE + E LVA A+ +E + S + + +
Sbjct: 583 KEEKKVEEKSEEVATKEE-----LVADAK--------VEKPEKAKSPVPKSPVEEKGKSP 629
Query: 138 MRGGRLMRRRRTAAPSGSEEPRLLLVHERLGVGAAGPEGEGLGLLQEAALVPEPEVPADL 197
+ + + ++ P E + + V G ++E A P P+ P +
Sbjct: 630 VPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVSKSPVEEKAKSPVPKSPVEE 689
Query: 198 AEMAREPA---EEPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEESAEEPATEEAAAP- 253
A+ E ++ EEK +EA +EE E+ E+P K+ P E++ AE P EEA A
Sbjct: 690 AKSKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEKP-KDVP--EKKKAESPVKEEAVAEV 746
Query: 254 EEVTKYQHEKWDEEAQDAAGKEEKEEKEKD 283
+TK ++E ++ GK ++EKEK+
Sbjct: 747 VTITKSVKVHLEKETKE-EGKPLQQEKEKE 775
Score = 51.6 bits (122), Expect = 8e-07
Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 7/112 (6%)
Query: 183 QEAALVPEPEVPADLAEMA--REPAEEPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEE 240
+EAA E E A+ E+A + P + A E EE +EE EE EE +E+ A+ +
Sbjct: 489 KEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKEEEGEKEE--EEGQEEEEEEDEGAKSD 546
Query: 241 SAEEPATEEAAAPEEVTKYQHE---KWDEEAQDAAGKEEKEEKEKDAENKVK 289
AEE +E+ + E+ Q E + + E ++A KEEK+ +EK E K
Sbjct: 547 QAEEGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEAKEEKKVEEKSEEVATK 598
Score = 49.7 bits (117), Expect = 3e-06
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 16/151 (10%)
Query: 157 EPRLLLVHERLGVGAAGPEGEGLGLLQEAALVPEPEVPADLAEM---AREPAEEPAEEKP 213
E L + E L V + E +E E EV A + + A E EE E++
Sbjct: 470 EEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKEEEGEKEE 529
Query: 214 TEEAAEEELAEEAAEEPAKEEPAAEEESA--------EEPATEEAAAPEEVTKYQHEKWD 265
E EEE +E A+ EE +E+E + EE TE A EE + +K +
Sbjct: 530 EEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEAKEEKKVE 589
Query: 266 EEAQDAAGKEE-----KEEKEKDAENKVKNS 291
E++++ A KEE K EK + A++ V S
Sbjct: 590 EKSEEVATKEELVADAKVEKPEKAKSPVPKS 620
Score = 47.0 bits (110), Expect = 2e-05
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 17/123 (13%)
Query: 182 LQEAALVPEPEVPADLAEMAREPAEEPAEEKPTEE-----------AAEEELAEEAAE-- 228
++EA E+ + E +E AEE EE EE A E+ EE E
Sbjct: 469 MEEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKEEEGEKE 528
Query: 229 -EPAKEEPAAEEESAEEPATEEAAAPEEVTKYQHEKWDEEAQ---DAAGKEEKEEKEKDA 284
E +EE E+E A+ EE + +E + + E EE + +A G+E + ++EK
Sbjct: 529 EEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEAKEEKKV 588
Query: 285 ENK 287
E K
Sbjct: 589 EEK 591
Score = 45.8 bits (107), Expect = 4e-05
Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 18/124 (14%)
Query: 188 VPEPEVPADLAEMAREPAEEPAEEKPTEE----------AAEEELA-------EEAAEEP 230
+ +P+V A ++ + EE EE E+ A EELA +EAAEE
Sbjct: 436 IQKPKVEAPKLKVQHKFVEEIIEETKVEDEKSEMEEALTAITEELAVSMKEEKKEAAEEK 495
Query: 231 AKEEPAAEEESAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKEEKEKDAENKVKN 290
+EEP AEEE + A EV + + EK +EE Q+ +E++ K AE
Sbjct: 496 -EEEPEAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSE 554
Query: 291 SKGT 294
+G+
Sbjct: 555 KEGS 558
Score = 45.4 bits (106), Expect = 6e-05
Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 17/123 (13%)
Query: 184 EAALVPEPEVPAD---LAEMAREPAEE----PAEEKPTEEAAEEEL----AEEAAEEPAK 232
E A P P+ P + + + + P EE P + P EE + + EE + P
Sbjct: 611 EKAKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVS 670
Query: 233 EEPAAEEESAEEPAT--EEAAAPEEVTKYQHEKWDEEAQDAAGKEEK----EEKEKDAEN 286
+ P E+ + P + EEA + EV K + ++ +E+ A KEEK EEK KD
Sbjct: 671 KSPVEEKAKSPVPKSPVEEAKSKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEKPKDVPE 730
Query: 287 KVK 289
K K
Sbjct: 731 KKK 733
Score = 41.2 bits (95), Expect = 0.001
Identities = 43/146 (29%), Positives = 59/146 (40%), Gaps = 8/146 (5%)
Query: 143 LMRRRRTAAPSGSEEPRLL---LVHERLGVGAAGPE---GEGLGLLQEAALVPEPEVPAD 196
+ ++ AA EEP + ++ V A PE EG +E E E
Sbjct: 484 MKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQEEEEEEDEGA 543
Query: 197 LAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEESAEEPATEEAAAPEEV 256
++ A E E EE +EE E AE +E A EE+ EE + E A E V
Sbjct: 544 KSDQAEEGGSEKEGSSEKEEGEQEE-GETEAEAEGEEAEAKEEKKVEEKSEEVATKEELV 602
Query: 257 TKYQHEKWDEEAQDAAGKEEKEEKEK 282
+ EK E+A+ K EEK K
Sbjct: 603 ADAKVEK-PEKAKSPVPKSPVEEKGK 627
>gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2
[Homo sapiens]
Length = 540
Score = 57.4 bits (137), Expect = 1e-08
Identities = 71/270 (26%), Positives = 114/270 (42%), Gaps = 23/270 (8%)
Query: 20 QEGAQAEAVG--DREGGDSGPDSGNTVAGVAGPMRGLGEEEGEQAAGLAAAPGGGNAEED 77
+EG + E G + E D G S G + +EEGEQ G A G E
Sbjct: 147 EEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEA 206
Query: 78 SEIRIVEEEEEEEEERNEADNFDLVAAARRYPIRGFRMEFLDMVHSLLLRIYHNDHILIR 137
E + VEE+ EE + E LVA A+ +E + S + + +
Sbjct: 207 KEEKKVEEKSEEVATKEE-----LVADAK--------VEKPEKAKSPVPKSPVEEKGKSP 253
Query: 138 MRGGRLMRRRRTAAPSGSEEPRLLLVHERLGVGAAGPEGEGLGLLQEAALVPEPEVPADL 197
+ + + ++ P E + + V G ++E A P P+ P +
Sbjct: 254 VPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVSKSPVEEKAKSPVPKSPVEE 313
Query: 198 AEMAREPA---EEPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEESAEEPATEEAAAP- 253
A+ E ++ EEK +EA +EE E+ E+P K+ P E++ AE P EEA A
Sbjct: 314 AKSKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEKP-KDVP--EKKKAESPVKEEAVAEV 370
Query: 254 EEVTKYQHEKWDEEAQDAAGKEEKEEKEKD 283
+TK ++E ++ GK ++EKEK+
Sbjct: 371 VTITKSVKVHLEKETKE-EGKPLQQEKEKE 399
Score = 51.6 bits (122), Expect = 8e-07
Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 7/112 (6%)
Query: 183 QEAALVPEPEVPADLAEMA--REPAEEPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEE 240
+EAA E E A+ E+A + P + A E EE +EE EE EE +E+ A+ +
Sbjct: 113 KEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKEEEGEKEE--EEGQEEEEEEDEGAKSD 170
Query: 241 SAEEPATEEAAAPEEVTKYQHE---KWDEEAQDAAGKEEKEEKEKDAENKVK 289
AEE +E+ + E+ Q E + + E ++A KEEK+ +EK E K
Sbjct: 171 QAEEGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEAKEEKKVEEKSEEVATK 222
Score = 49.7 bits (117), Expect = 3e-06
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 16/151 (10%)
Query: 157 EPRLLLVHERLGVGAAGPEGEGLGLLQEAALVPEPEVPADLAEM---AREPAEEPAEEKP 213
E L + E L V + E +E E EV A + + A E EE E++
Sbjct: 94 EEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKEEEGEKEE 153
Query: 214 TEEAAEEELAEEAAEEPAKEEPAAEEESA--------EEPATEEAAAPEEVTKYQHEKWD 265
E EEE +E A+ EE +E+E + EE TE A EE + +K +
Sbjct: 154 EEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEAKEEKKVE 213
Query: 266 EEAQDAAGKEE-----KEEKEKDAENKVKNS 291
E++++ A KEE K EK + A++ V S
Sbjct: 214 EKSEEVATKEELVADAKVEKPEKAKSPVPKS 244
Score = 47.0 bits (110), Expect = 2e-05
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 17/123 (13%)
Query: 182 LQEAALVPEPEVPADLAEMAREPAEEPAEEKPTEE-----------AAEEELAEEAAE-- 228
++EA E+ + E +E AEE EE EE A E+ EE E
Sbjct: 93 MEEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKEEEGEKE 152
Query: 229 -EPAKEEPAAEEESAEEPATEEAAAPEEVTKYQHEKWDEEAQ---DAAGKEEKEEKEKDA 284
E +EE E+E A+ EE + +E + + E EE + +A G+E + ++EK
Sbjct: 153 EEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEAKEEKKV 212
Query: 285 ENK 287
E K
Sbjct: 213 EEK 215
Score = 45.8 bits (107), Expect = 4e-05
Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 18/124 (14%)
Query: 188 VPEPEVPADLAEMAREPAEEPAEEKPTEE----------AAEEELA-------EEAAEEP 230
+ +P+V A ++ + EE EE E+ A EELA +EAAEE
Sbjct: 60 IQKPKVEAPKLKVQHKFVEEIIEETKVEDEKSEMEEALTAITEELAVSMKEEKKEAAEEK 119
Query: 231 AKEEPAAEEESAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKEEKEKDAENKVKN 290
+EEP AEEE + A EV + + EK +EE Q+ +E++ K AE
Sbjct: 120 -EEEPEAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSE 178
Query: 291 SKGT 294
+G+
Sbjct: 179 KEGS 182
Score = 45.4 bits (106), Expect = 6e-05
Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 17/123 (13%)
Query: 184 EAALVPEPEVPAD---LAEMAREPAEE----PAEEKPTEEAAEEEL----AEEAAEEPAK 232
E A P P+ P + + + + P EE P + P EE + + EE + P
Sbjct: 235 EKAKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVS 294
Query: 233 EEPAAEEESAEEPAT--EEAAAPEEVTKYQHEKWDEEAQDAAGKEEK----EEKEKDAEN 286
+ P E+ + P + EEA + EV K + ++ +E+ A KEEK EEK KD
Sbjct: 295 KSPVEEKAKSPVPKSPVEEAKSKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEKPKDVPE 354
Query: 287 KVK 289
K K
Sbjct: 355 KKK 357
Score = 41.2 bits (95), Expect = 0.001
Identities = 43/146 (29%), Positives = 59/146 (40%), Gaps = 8/146 (5%)
Query: 143 LMRRRRTAAPSGSEEPRLL---LVHERLGVGAAGPE---GEGLGLLQEAALVPEPEVPAD 196
+ ++ AA EEP + ++ V A PE EG +E E E
Sbjct: 108 MKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQEEEEEEDEGA 167
Query: 197 LAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEESAEEPATEEAAAPEEV 256
++ A E E EE +EE E AE +E A EE+ EE + E A E V
Sbjct: 168 KSDQAEEGGSEKEGSSEKEEGEQEE-GETEAEAEGEEAEAKEEKKVEEKSEEVATKEELV 226
Query: 257 TKYQHEKWDEEAQDAAGKEEKEEKEK 282
+ EK E+A+ K EEK K
Sbjct: 227 ADAKVEK-PEKAKSPVPKSPVEEKGK 251
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 56.6 bits (135), Expect = 3e-08
Identities = 72/289 (24%), Positives = 102/289 (35%), Gaps = 27/289 (9%)
Query: 2 SATGDQDLIQEDQEAPVNQEGAQAEAVGDREGGDSGPDSGNTVAGVAGPMRGLGEEEGEQ 61
+A GDQD Q D + A+ EA + EG ++ G+ A G + E E
Sbjct: 1819 AAGGDQDPGQSDGAEGIEAPEAEGEAQPESEGVEAPEAEGD-----AQEAEGEAQPESED 1873
Query: 62 AAGLAAAPGGGNAEEDSEIRIVEEEEEEEEERNEADNFDLVAAARRYPIRGFRMEFLDMV 121
A ED E E E + E E EA + A + E D
Sbjct: 1874 VEAPEAEGEAQPESEDVETPEAEWEVQPESEGAEAPEAEKEAQPETESVEALETEGEDEP 1933
Query: 122 HSLLLRIYHNDHILIRMRGGRLMRRRRTAAPS-GSEEPRLLLVHERLGVGAAGPEGEGLG 180
S G A + G +P ++ + A PE E +
Sbjct: 1934 ES---------------EGAEAQEAEEAAQEAEGQTQPESEVIESQEAEEEAQPESEDVE 1978
Query: 181 LLQEAALVPEPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEE--PAKEEPAAE 238
L+ E E A + E E P E +EA EE E E P E A+
Sbjct: 1979 ALEVEVETQEAEGEA---QPESEDVEAPEAEGEMQEAEEEAQPESDGVEAQPKSEGEEAQ 2035
Query: 239 EESAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKEEKEKDAENK 287
E E TE A PE + + +EEAQ+A G+ ++ E E E++
Sbjct: 2036 EVEGETQKTEGDAQPES-DGVEAPEAEEEAQEAEGEVQEAEGEAHPESE 2083
Score = 54.7 bits (130), Expect = 1e-07
Identities = 68/276 (24%), Positives = 102/276 (36%), Gaps = 29/276 (10%)
Query: 21 EGAQAEAVGDREGGDSGPDSGNTVAGVAGPM-----RGLGEEEGEQAAGLAAAPGGGNAE 75
+G AE + D P S TV G G + +G G +EGE G N +
Sbjct: 1702 DGEAAEVAPGKTHTD--PTSTRTVQGAEGGLGPGLSQGPGVDEGEDGEGSQRL----NRD 1755
Query: 76 EDSEIRIVEEEEEEEEERNEADNFDLVAAARRYPIRGFRMEFLDMVHSLLLRIYHNDHIL 135
+D ++ E + +E + N + A + + + H D++
Sbjct: 1756 KDPKLGEAEGDAMAQEREGKTHNSETSAGSELGEAEQEGEGISERGETGGQGSGHEDNLQ 1815
Query: 136 IRMRGGRLMRRRRTAAPSGSEEPRLLLVHERLGVGAAGPEGEGLGLLQEAALVPEPEVPA 195
G ++ G E P G A PE EG+ PE E A
Sbjct: 1816 GEAAAGGDQDPGQSDGAEGIEAPE--------AEGEAQPESEGVE-------APEAEGDA 1860
Query: 196 DLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEESAEEPATEEAAAP-- 253
AE +P E E E A+ E +E+ A+ E E E AE P E+ A P
Sbjct: 1861 QEAEGEAQPESEDVEAPEAEGEAQPE-SEDVETPEAEWEVQPESEGAEAPEAEKEAQPET 1919
Query: 254 EEVTKYQHEKWDEEAQDAAGKEEKEEKEKDAENKVK 289
E V + E DE + A +E EE ++AE + +
Sbjct: 1920 ESVEALETEGEDEPESEGAEAQEAEEAAQEAEGQTQ 1955
Score = 52.4 bits (124), Expect = 5e-07
Identities = 80/296 (27%), Positives = 104/296 (35%), Gaps = 29/296 (9%)
Query: 3 ATGDQDLIQEDQEAPVNQEGAQAEAVGDREGGDSGPDSGNTVAGVAGPMRGLGEEEGEQA 62
A G+ ED EAP EG EA + + P+S GV + GEE E
Sbjct: 1989 AEGEAQPESEDVEAP-EAEGEMQEAEEEAQ-----PESD----GVEAQPKSEGEEAQEVE 2038
Query: 63 AGLAAAPGGGNAEEDSEIRIVEEEEEEEEERNEADNFDLVAAARRYPIRGFRMEFLDMVH 122
G E D + E EEE +E E + A + E
Sbjct: 2039 GETQKTEGDAQPESDG-VEAPEAEEEAQEAEGEVQEAEGEAHPESEDVDAQEAEGEAQPE 2097
Query: 123 SLLLRIYHNDHILIRMRGGRLMRRRRTAAPS----------GSEEPRLLLVHERLGVGAA 172
S + + + G A P G +P V + G A
Sbjct: 2098 SEGVEAPEAEGEAQKAEGIEAPETEGEAQPESEGIEAPEAEGEAQPESEGVEAQDAEGEA 2157
Query: 173 GPEGEGLGLLQEAALVPEPE---VPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEE 229
PE EG+ QEA +PE V A AE +P E E E A+ EL E E
Sbjct: 2158 QPESEGIEA-QEAEEEAQPELEGVEAPEAEGEAQPESEGIEAPEAEGEAQPEL--EGVEA 2214
Query: 230 P-AKEEPAAEEESAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKEEKEKDA 284
P A+EE E E E P E A PE + Q EK Q + G + EE + +
Sbjct: 2215 PEAEEEAQPEPEGVETPEAEGEAQPESEGETQGEK-KGSPQVSLGDGQSEEASESS 2269
Score = 52.0 bits (123), Expect = 6e-07
Identities = 74/306 (24%), Positives = 108/306 (35%), Gaps = 40/306 (13%)
Query: 3 ATGDQDLIQEDQEAPVNQEGAQAEAVGDREGGDSGPDSGNTVAGVAGPMRGLGEEEGE-- 60
A G+ ED E P + Q E+ G T + A G E E E
Sbjct: 1879 AEGEAQPESEDVETPEAEWEVQPESEGAEAPEAEKEAQPETESVEALETEGEDEPESEGA 1938
Query: 61 --QAAGLAAAPGGGNAEEDSEIRIVEEEEEEEEERNEADNFD-LVAAARRYPIRGFRMEF 117
Q A AA G + +SE+ +E +E EEE + E+++ + L G
Sbjct: 1939 EAQEAEEAAQEAEGQTQPESEV--IESQEAEEEAQPESEDVEALEVEVETQEAEGEAQP- 1995
Query: 118 LDMVHSLLLRIYHNDHILIRMRGGRLMRRRRTAAP----------SGSEEPRLLLVHERL 167
++ + G + A P S EE + + +
Sbjct: 1996 ------------ESEDVEAPEAEGEMQEAEEEAQPESDGVEAQPKSEGEEAQEVEGETQK 2043
Query: 168 GVGAAGPEGEGLGLLQEAALVPEPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAA 227
G A PE +G+ + E E AE P E + + E A+ E E
Sbjct: 2044 TEGDAQPESDGVEAPEAEEEAQEAEGEVQEAEGEAHPESEDVDAQEAEGEAQPE--SEGV 2101
Query: 228 EEPAKEEPAAEEESAEEPATEEAA--------APEEVTKYQHEKWDEEAQDAAGKEEKEE 279
E P E A + E E P TE A APE + Q E EAQDA G+ + E
Sbjct: 2102 EAPEAEGEAQKAEGIEAPETEGEAQPESEGIEAPEAEGEAQPESEGVEAQDAEGEAQPES 2161
Query: 280 KEKDAE 285
+ +A+
Sbjct: 2162 EGIEAQ 2167
Score = 50.8 bits (120), Expect = 1e-06
Identities = 71/296 (23%), Positives = 105/296 (35%), Gaps = 51/296 (17%)
Query: 3 ATGDQDLIQEDQEAPVNQEGAQAEAVGDREGGDSGPDSGNTVAGVAGPMRGLGEEE---G 59
A GD + QE + N E + +G+ E G G +G G E+ G
Sbjct: 1763 AEGDA-MAQEREGKTHNSETSAGSELGEAEQEGEGISERGETGG-----QGSGHEDNLQG 1816
Query: 60 EQAAGLAAAPGGGNAEEDSEIRIVEEEEEEEEERNEADNFDLVAAARRYPIRGFRMEFLD 119
E AAG PG + E E E E + E E EA + A
Sbjct: 1817 EAAAGGDQDPGQSDGAEGIEAPEAEGEAQPESEGVEAPEAEGDAQ--------------- 1861
Query: 120 MVHSLLLRIYHNDHILIRMRGGRLMRRRRTAAPS--GSEEPRLLLVHERLGVGAAGPEGE 177
G AP G +P V PE E
Sbjct: 1862 -----------------EAEGEAQPESEDVEAPEAEGEAQPESEDVETPEAEWEVQPESE 1904
Query: 178 GLGLLQEAALVPEPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEP-AKEEPA 236
G A PE E A + E E E++P E AE + AEEAA+E + +P
Sbjct: 1905 G-------AEAPEAEKEAQPETESVEALETEGEDEPESEGAEAQEAEEAAQEAEGQTQPE 1957
Query: 237 AEEESAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKEEKEKDAENKVKNSK 292
+E ++E E E+V + E +EA+ A E ++ + +AE +++ ++
Sbjct: 1958 SEVIESQEAEEEAQPESEDVEALEVEVETQEAEGEAQPESEDVEAPEAEGEMQEAE 2013
Score = 48.9 bits (115), Expect = 5e-06
Identities = 69/286 (24%), Positives = 99/286 (34%), Gaps = 55/286 (19%)
Query: 7 QDLIQEDQEAPVNQEGAQAEAVGDREGGDSGPDSGNTVAGVA-GPMRGLGEEEGEQAAGL 65
Q+ +E Q + E + E G++ P+S + A A G M+ EE ++ G+
Sbjct: 1964 QEAEEEAQPESEDVEALEVEVETQEAEGEAQPESEDVEAPEAEGEMQEAEEEAQPESDGV 2023
Query: 66 AAAPG--GGNAEE-DSEIRIVE----------EEEEEEEERNEADNFDLVAAARRYPIRG 112
A P G A+E + E + E E E EEE EA+ A +P
Sbjct: 2024 EAQPKSEGEEAQEVEGETQKTEGDAQPESDGVEAPEAEEEAQEAEGEVQEAEGEAHP--- 2080
Query: 113 FRMEFLDMVHSLLLRIYHNDHILIRMRGGRLMRRRRTAAPSGSEEPRLLLVHERLGVGAA 172
E +D + G +P G
Sbjct: 2081 -ESEDVDAQEA-----------------------------EGEAQPE--------SEGVE 2102
Query: 173 GPEGEGLGLLQEAALVPEPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEPAK 232
PE EG E PE E A E E E +P E E + AE A+ ++
Sbjct: 2103 APEAEGEAQKAEGIEAPETEGEAQPESEGIEAPEAEGEAQPESEGVEAQDAEGEAQPESE 2162
Query: 233 EEPAAEEESAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKE 278
A E E +P E APE + Q E EA +A G+ + E
Sbjct: 2163 GIEAQEAEEEAQPELEGVEAPEAEGEAQPESEGIEAPEAEGEAQPE 2208
Score = 31.6 bits (70), Expect = 0.87
Identities = 35/116 (30%), Positives = 46/116 (39%), Gaps = 7/116 (6%)
Query: 185 AALVPEPEVPADLAEM-AREPAEEPAEEKPTEEAAEEELAEEAAEEPAKEEPA-AEEESA 242
A E E D E A E+ AE EE EE E E +EE EE
Sbjct: 1268 ACATNEDEAERDSEEQRASSNLEQLAENTVQEEVQLEETKEGTEGEGLQEEAVQLEETKT 1327
Query: 243 EEPATEEAAAPEEVTKYQHE-KWDEEAQ----DAAGKEEKEEKEKDAENKVKNSKG 293
EE EE EE + + E + +EEAQ + G E +E+ E + +G
Sbjct: 1328 EEGLQEEGVQLEETKETEGEGQQEEEAQLEEIEETGGEGLQEEGVQLEEVKEGPEG 1383
Score = 28.5 bits (62), Expect = 7.4
Identities = 46/226 (20%), Positives = 77/226 (34%), Gaps = 15/226 (6%)
Query: 62 AAGLAAAPGGGNAEEDSEIRIVEEEEEEEEERNEADNFDLVAAARRYPIRGFRMEFLDMV 121
A A A AE DSE + E+ E + L G + E + +
Sbjct: 1264 ARACACATNEDEAERDSEEQRASSNLEQLAENTVQEEVQLEETKEGTEGEGLQEEAVQLE 1323
Query: 122 HSLLLRIYHNDHILIRMRGGRLMRRRRTAAPSGSEEPRLLLVHERLGVGAAGPEGEGLGL 181
+ ++ G +L + T EE L E G G + EG+ L
Sbjct: 1324 ET-------KTEEGLQEEGVQLEETKETEGEGQQEEEAQLEEIEE--TGGEGLQEEGVQL 1374
Query: 182 LQEAALVPEPEVPADLAEMARE----PAEEPAEEKPTEEAAEEELAEEAAEEPAKEEPAA 237
+E PE + + E + P E + EA+ + ++P +EE A
Sbjct: 1375 -EEVKEGPEGGLQGEALEEGLKEEGLPEEGSVHGQELSEASSPDGKGSQEDDPVQEEEAG 1433
Query: 238 EEESAEEPATEEAA-APEEVTKYQHEKWDEEAQDAAGKEEKEEKEK 282
++ EP E P E + E ++ +G + + EK
Sbjct: 1434 RASASAEPCPAEGTEEPTEPPSHLSETDPSASERQSGSQLEPGLEK 1479
>gi|105990539 neurofilament, light polypeptide 68kDa [Homo sapiens]
Length = 543
Score = 56.2 bits (134), Expect = 3e-08
Identities = 35/85 (41%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 210 EEKPTEEAAEEELAEEAAEEPAKEEPAAEEE-SAEEPATEEAAAPEEVTKYQHEKWDEEA 268
E+ EE E AEEA +EP E A EEE EE EEAA EE K + E+ EE
Sbjct: 450 EQIEVEETIEAAKAEEAKDEPPSEGEAEEEEKDKEEAEEEEAAEEEEAAKEESEEAKEEE 509
Query: 269 QDAAGKEEKEEKEKDAENKVKNSKG 293
+ G+E +E KE + E K G
Sbjct: 510 EGGEGEEGEETKEAEEEEKKVEGAG 534
Score = 54.3 bits (129), Expect = 1e-07
Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 5/102 (4%)
Query: 182 LQEAALVPEPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEES 241
+QE + E + A AE A++ E P+E + EE ++E AEE EE A+EE AA+EES
Sbjct: 447 VQEEQIEVEETIEAAKAEEAKD--EPPSEGEAEEEEKDKEEAEE--EEAAEEEEAAKEES 502
Query: 242 AEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKEEKEKD 283
E EE EE + + + +E+ + AG EE+ K+KD
Sbjct: 503 EEAKEEEEGGEGEEGEETKEAEEEEKKVEGAG-EEQAAKKKD 543
Score = 50.4 bits (119), Expect = 2e-06
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 205 AEEPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEESAEEPATEEAAAPEEVTKYQHEKW 264
AEE +E P+E AEEE E +E A+EE AAEEE A + +EEA EE + + +
Sbjct: 463 AEEAKDEPPSEGEAEEE---EKDKEEAEEEEAAEEEEAAKEESEEAKEEEEGGEGEEGEE 519
Query: 265 DEEAQDAAGKEEKEEKEKDAENK 287
+EA++ K E +E+ A+ K
Sbjct: 520 TKEAEEEEKKVEGAGEEQAAKKK 542
Score = 28.9 bits (63), Expect = 5.7
Identities = 25/89 (28%), Positives = 35/89 (39%), Gaps = 3/89 (3%)
Query: 10 IQEDQ-EAPVNQEGAQAEAVGDREGGDSGPDSGNTVAGVAGPMRGLGEEEG--EQAAGLA 66
+QE+Q E E A+AE D + + A EEE E++
Sbjct: 447 VQEEQIEVEETIEAAKAEEAKDEPPSEGEAEEEEKDKEEAEEEEAAEEEEAAKEESEEAK 506
Query: 67 AAPGGGNAEEDSEIRIVEEEEEEEEERNE 95
GG EE E + EEEE++ E E
Sbjct: 507 EEEEGGEGEEGEETKEAEEEEKKVEGAGE 535
Score = 28.9 bits (63), Expect = 5.7
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Query: 238 EEESAEEPATEEAA--------APEEVTKYQHEKWDEEAQDAAGKEEKEEKEKDAENKVK 289
+EE E T EAA P E + EK EEA++ EE+E ++++E +
Sbjct: 448 QEEQIEVEETIEAAKAEEAKDEPPSEGEAEEEEKDKEEAEEEEAAEEEEAAKEESEEAKE 507
Query: 290 NSKG 293
+G
Sbjct: 508 EEEG 511
>gi|23503317 coiled-coil domain containing 96 [Homo sapiens]
Length = 555
Score = 53.1 bits (126), Expect = 3e-07
Identities = 49/151 (32%), Positives = 69/151 (45%), Gaps = 23/151 (15%)
Query: 149 TAAPSGSEEPRLLLVHERLGVGAAGPEGEGLGLLQEAALVPEPEVPADLAEMAREPAEEP 208
TAA +E P+ L E G G G + A PEPE PA++ AEEP
Sbjct: 61 TAADEQAEAPKGLTAAEAAGEEGPGEPG------RPAEPQPEPEEPAEVG------AEEP 108
Query: 209 AEEKPTEEAAEEELAEEAAEEPAKEEPAAEEE--SAEEPAT-----EEAAAPEEVTKYQH 261
A+ +P A EEL EA E ++ +E A P T E AAAPE T +
Sbjct: 109 AQPEPG--AGPEELEAEAGAEELEQAAEGKEVRFQASLPLTRIDEEEAAAAPEAET--ER 164
Query: 262 EKWDEEAQDAAGKEEKEEKEKDAENKVKNSK 292
+ +EE ++ ++ E KE+D E + S+
Sbjct: 165 VEGEEEDKEETQRDGAESKERDGEGRPAKSQ 195
Score = 38.1 bits (87), Expect = 0.009
Identities = 34/104 (32%), Positives = 41/104 (39%), Gaps = 8/104 (7%)
Query: 189 PEPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEPAKE-EPAAEEESAEEPAT 247
PE E A A+E AE P A E EE EP + EP E E E
Sbjct: 47 PEEEEEEQAASQGGTAADEQAEA-PKGLTAAEAAGEEGPGEPGRPAEPQPEPEEPAEVGA 105
Query: 248 EEAAAPEEVTKYQHEKWDEEAQDAAGKEEKEEKEKDAENKVKNS 291
EE A PE EE + AG EE E+ + E + + S
Sbjct: 106 EEPAQPEP------GAGPEELEAEAGAEELEQAAEGKEVRFQAS 143
Score = 29.6 bits (65), Expect = 3.3
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 14/90 (15%)
Query: 196 DLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEESAEEPATEEAAAPEE 255
D +A P++ A P EL E EE +EE AA + A E+A AP+
Sbjct: 17 DGESLAARPSKIKASSGPPTSPEPGELESEPEEE--EEEQAASQGGTA--ADEQAEAPKG 72
Query: 256 VTKYQHEKWDEEAQDAAGKEEKEEKEKDAE 285
+T A +AAG+E E + AE
Sbjct: 73 LT----------AAEAAGEEGPGEPGRPAE 92
>gi|48255889 protein kinase C substrate 80K-H isoform 1 [Homo
sapiens]
Length = 528
Score = 51.2 bits (121), Expect = 1e-06
Identities = 40/108 (37%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
Query: 192 EVPADLAEMAREPAEE--PAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEESAEEP-ATE 248
++PA A EP EE P PTEE EEE EE EE +EE + E A P +
Sbjct: 288 DLPAPSAPDLTEPKEEQPPVPSSPTEEEEEEE--EEEEEEAEEEEEEEDSEEAPPPLSPP 345
Query: 249 EAAAPEEVTKY-----QHEKWDEEAQDAAGK-EEKEEKEKDAENKVKN 290
+ A+P E K Q + + + AQ+A K EE E KD E ++N
Sbjct: 346 QPASPAEEDKMPPYDEQTQAFIDAAQEARNKFEEAERSLKDMEESIRN 393
Score = 34.3 bits (77), Expect = 0.13
Identities = 27/95 (28%), Positives = 41/95 (43%)
Query: 190 EPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEESAEEPATEE 249
E E +AE+ RE + A EE ++ E A ++ ++ EE
Sbjct: 123 ERESLQQMAEVTREGFRLKKILIEDWKKAREEKQKKLIELQAGKKSLEDQVEMLRTVKEE 182
Query: 250 AAAPEEVTKYQHEKWDEEAQDAAGKEEKEEKEKDA 284
A PE K QH+K EE AA ++++E DA
Sbjct: 183 AEKPEREAKEQHQKLWEEQLAAAKAQQEQELAADA 217
>gi|156071476 hypothetical protein LOC401137 [Homo sapiens]
Length = 219
Score = 51.2 bits (121), Expect = 1e-06
Identities = 37/78 (47%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query: 186 ALVPEPEVPADLAEMAREPAE------EPAEEKPT--EEAAEEELAEE-AAEEPAKEEPA 236
A P P +A EPA EPA E P E AAE +A E AAE P EPA
Sbjct: 130 AAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPA 189
Query: 237 AEEESAEEPATEEAAAPE 254
AEE S EPAT + AAPE
Sbjct: 190 AEEPSPAEPATAKPAAPE 207
Score = 42.0 bits (97), Expect = 6e-04
Identities = 33/76 (43%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 186 ALVPEPEVPADLAEMAREP-AEEPAEEKPT--EEAAEEEL-AEEAAEEPAKEEPAAEEES 241
A P PA A + P A EPA P E AAE + AE AAE P EPAAE
Sbjct: 125 AAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPV 184
Query: 242 AEEPATEEAAAPEEVT 257
EPA EE + E T
Sbjct: 185 GVEPAAEEPSPAEPAT 200
Score = 38.1 bits (87), Expect = 0.009
Identities = 29/66 (43%), Positives = 34/66 (51%), Gaps = 9/66 (13%)
Query: 189 PEPEVPADLAEMAREPAEE------PAEEKPT--EEAAEEELA-EEAAEEPAKEEPAAEE 239
P PA A +A EPA E PA E P E AAE + E AAEEP+ EPA +
Sbjct: 143 PVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAK 202
Query: 240 ESAEEP 245
+A EP
Sbjct: 203 PAAPEP 208
Score = 35.8 bits (81), Expect = 0.046
Identities = 30/88 (34%), Positives = 33/88 (37%), Gaps = 3/88 (3%)
Query: 195 ADLAEMAREPAEEPAEEKP---TEEAAEEELAEEAAEEPAKEEPAAEEESAEEPATEEAA 251
A A A A EPA P T AAE A EPA E P E +AE P E A
Sbjct: 120 AAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPA 179
Query: 252 APEEVTKYQHEKWDEEAQDAAGKEEKEE 279
A V + A+ A K E
Sbjct: 180 AEAPVGVEPAAEEPSPAEPATAKPAAPE 207
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 50.8 bits (120), Expect = 1e-06
Identities = 44/134 (32%), Positives = 69/134 (51%), Gaps = 16/134 (11%)
Query: 162 LVHERLGVGAAGPEGEGLGLLQEAA-----------LVPEPEVPADLAEMAREPAEEPAE 210
LV E LG AA P + LLQEAA L +PE ++ E+ E +++
Sbjct: 179 LVEEDLGQ-AAKPGPGIVHLLQEAAEGAASEEGEKGLFIQPEDAEEVVEVTTERSQDLCP 237
Query: 211 EKPTEEAAEEELAEEAAEEPAKEEPAAEEESAEEPATEEAAAPEEVTKYQHEKWDEEAQD 270
+ E+AA EE +++ +EE EEE EE EE EE + + E+ +EE ++
Sbjct: 238 QS-LEDAASEESSKQKGILSHEEEDEEEEEEEEE---EEEDEEEEEEEEEEEEEEEEEEE 293
Query: 271 AAGKEEKEEKEKDA 284
+EE+EE+E++A
Sbjct: 294 EEEEEEEEEEEEEA 307
Score = 47.8 bits (112), Expect = 1e-05
Identities = 30/69 (43%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 203 EPAEEPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEESAEEPATEEAAAPEEVTKYQHE 262
E EE EE+ EE EEE EE EE +EE EEE EE EE AAP+ + +Q +
Sbjct: 259 EEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVI--FQED 316
Query: 263 KWDEEAQDA 271
AQ A
Sbjct: 317 TSHTSAQKA 325
Score = 47.4 bits (111), Expect = 2e-05
Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 6/125 (4%)
Query: 158 PRLLLVHERLGVGAAGPEGE-GLGLLQEAA---LVPEPEVPADLAEMAREPA--EEPAEE 211
P ++ + + GAA EGE GL + E A + E DL + E A EE +++
Sbjct: 192 PGIVHLLQEAAEGAASEEGEKGLFIQPEDAEEVVEVTTERSQDLCPQSLEDAASEESSKQ 251
Query: 212 KPTEEAAEEELAEEAAEEPAKEEPAAEEESAEEPATEEAAAPEEVTKYQHEKWDEEAQDA 271
K EE+ EE EE +E+ EEE EE EE EE + + E+ +E A D
Sbjct: 252 KGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDV 311
Query: 272 AGKEE 276
+E+
Sbjct: 312 IFQED 316
Score = 42.7 bits (99), Expect = 4e-04
Identities = 26/68 (38%), Positives = 32/68 (47%)
Query: 199 EMAREPAEEPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEESAEEPATEEAAAPEEVTK 258
E E EE EE+ EE EEE EE EE +EE EEE EE A + E+ +
Sbjct: 260 EDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQEDTSH 319
Query: 259 YQHEKWDE 266
+K E
Sbjct: 320 TSAQKAPE 327
Score = 33.5 bits (75), Expect = 0.23
Identities = 21/70 (30%), Positives = 30/70 (42%)
Query: 190 EPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEESAEEPATEE 249
E E + E E EE EE+ EE EEE EEAA + +E + + + P
Sbjct: 271 EEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQEDTSHTSAQKAPELRG 330
Query: 250 AAAPEEVTKY 259
+P +Y
Sbjct: 331 PESPSPKPEY 340
Score = 30.8 bits (68), Expect = 1.5
Identities = 25/90 (27%), Positives = 35/90 (38%), Gaps = 15/90 (16%)
Query: 7 QDLIQEDQEAPVNQEGAQAEAVGDREGGDSGPDSGNTVAGVAGPMRGLGEEEGEQAAGLA 66
QDL + E ++E ++ + + E D + EEE E+
Sbjct: 233 QDLCPQSLEDAASEESSKQKGILSHEEEDEEEEE---------------EEEEEEEDEEE 277
Query: 67 AAPGGGNAEEDSEIRIVEEEEEEEEERNEA 96
EE+ E EEEEEEEEE EA
Sbjct: 278 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEA 307
Score = 30.0 bits (66), Expect = 2.5
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 10/86 (11%)
Query: 12 EDQEAPVNQEGAQAEAVGDREGGDSGPDSGNTVAGVAGPMRGLGEEEGEQAAGLAAAPGG 71
ED E V +++ + + D+ + + G+ EEE E+
Sbjct: 219 EDAEEVVEVTTERSQDLCPQSLEDAASEESSKQKGILSHEEEDEEEEEEEE--------- 269
Query: 72 GNAEEDSEIRIVEEEEEEEEERNEAD 97
EED E EEEEEEEEE E +
Sbjct: 270 -EEEEDEEEEEEEEEEEEEEEEEEEE 294
Score = 28.1 bits (61), Expect = 9.6
Identities = 15/31 (48%), Positives = 18/31 (58%)
Query: 75 EEDSEIRIVEEEEEEEEERNEADNFDLVAAA 105
EE+ E EEEEEEEEE E + + AA
Sbjct: 278 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEAA 308
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 50.4 bits (119), Expect = 2e-06
Identities = 30/94 (31%), Positives = 46/94 (48%)
Query: 199 EMAREPAEEPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEESAEEPATEEAAAPEEVTK 258
E RE EE EE+ EE E + EE E+ ++E +++ +E EE EEV +
Sbjct: 2248 EEEREEEEEREEEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFE 2307
Query: 259 YQHEKWDEEAQDAAGKEEKEEKEKDAENKVKNSK 292
+ E EE ++ EE+EE+ E +V K
Sbjct: 2308 EKEEIMSEEETESLSDEEEEEESCSLEEEVDREK 2341
Score = 42.4 bits (98), Expect = 5e-04
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Query: 195 ADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEESAEEPATEEAAAPE 254
A + +E +E +EE EE+ E +E K+E + EE EE EE E
Sbjct: 2203 AKRGDKPKEKFSSQVDEVESEEHFSEEM-ESLLDELEKQESLSSEE--EEEREEEEEREE 2259
Query: 255 EVTKYQHEKWDEEAQDAAGKEEKEEKEKDAENKVKNSK 292
E + + E+ EE + + EKEE+EK + K K +
Sbjct: 2260 EEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKE 2297
Score = 41.2 bits (95), Expect = 0.001
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Query: 183 QEAALVPEPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEPAKEEPAA---EE 239
+E + E EV L R+ E +KP E+ + + + E +EE EE + E
Sbjct: 2179 EEEGGIEEEEVIPFLKRRWRKRKEAKRGDKPKEKFSSQ-VDEVESEEHFSEEMESLLDEL 2237
Query: 240 ESAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKEEK--EKDAENKVKNSK 292
E E ++EE EE + + E+ EE ++ +EE EEK EK+ E K K K
Sbjct: 2238 EKQESLSSEEEEEREEEEEREEEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKK 2292
Score = 40.4 bits (93), Expect = 0.002
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 201 AREPAEEPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEESAEEPATEEAAAPEEVTKYQ 260
+ E E E E +E L+ E EE +EE EEE EE EE EE + Q
Sbjct: 2222 SEEHFSEEMESLLDELEKQESLSSEEEEEREEEEEREEEEVREEE--EERKEEEEGEEKQ 2279
Query: 261 HEKWDEEAQDAAGKEEKEEKEKDAENK 287
EK +EE + K++KE+K+++ + K
Sbjct: 2280 VEKEEEEKK----KKKKEKKKEEVQEK 2302
Score = 40.4 bits (93), Expect = 0.002
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 190 EPEVPADLAEMAREPAEEPAEEKPTEEAA--EEELAEEAAEEPAKEEPAAEEESAEEPAT 247
E E + E+ E E EE+ E+ EEE ++ +E KEE +EE EE
Sbjct: 2252 EEEEEREEEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFEE--K 2309
Query: 248 EEAAAPEEVTKYQHEKWDEEAQDAAGKEEKEEKEKDAENKVKNSK 292
EE + EE E EE +++ EE+ ++EK+ K K K
Sbjct: 2310 EEIMSEEETESLSDE---EEEEESCSLEEEVDREKEILKKEKQFK 2351
Score = 40.0 bits (92), Expect = 0.002
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 207 EPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEESAEEPATEEAAAPEEVTKYQHEKWDE 266
E E +EE E E EE EE +EE EEE EE EE +E + + +K ++
Sbjct: 2238 EKQESLSSEEEEEREEEEEREEEEVREE---EEERKEEEEGEEKQVEKEEEEKKKKKKEK 2294
Query: 267 EAQDAAGKEEK-EEKEK 282
+ ++ KEE EEKE+
Sbjct: 2295 KKEEVQEKEEVFEEKEE 2311
Score = 39.3 bits (90), Expect = 0.004
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 9/104 (8%)
Query: 195 ADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEPA-------KEEPAAEEESAEEPAT 247
A++ + + EE + + + E+ELA+E E KEE +EE
Sbjct: 1687 AEVKNILAQKVEELPQREQNLDWQEKELAQELEELEWDMEELSWKEEELNQEEGKLVEEK 1746
Query: 248 EEAAAPEEVTKYQHEKWDEEAQDAAGKEEK--EEKEKDAENKVK 289
++ A EE +Q EK EE A +EE +EKEK A++K K
Sbjct: 1747 KKLAEEEEALAWQREKLSEEETKLAQEEELLIQEKEKLAQHKEK 1790
Score = 37.4 bits (85), Expect = 0.016
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 210 EEKPTEEAAEEELAEEAAEEPAKEEPAAEEESAEEPATEEAAAPEEVTKYQHEKWDEEAQ 269
E++ + + EEE EE EE +EE EEE EE EE ++V K + EK ++ +
Sbjct: 2238 EKQESLSSEEEEEREE--EEEREEEEVREEE--EERKEEEEGEEKQVEKEEEEK--KKKK 2291
Query: 270 DAAGKEEKEEKEKDAENK 287
KEE +EKE+ E K
Sbjct: 2292 KEKKKEEVQEKEEVFEEK 2309
Score = 30.8 bits (68), Expect = 1.5
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 8/105 (7%)
Query: 183 QEAALVPEPEVPA--DLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEE 240
QE LV P+ D + E + E + + +A +EE + +E K A E+
Sbjct: 1444 QEGKLVMIERTPSWQDWKKAWDEWKQVHGETRKSWKAWKEEWEKRLLQEEEKLHQAGEKL 1503
Query: 241 SAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKEEKEKDAE 285
S EE +E K + E+W + ++ + KE++ KD E
Sbjct: 1504 SPEEEMLQEDK------KLKWEEWKQVWENMLSSKSKEQQYKDEE 1542
Score = 30.4 bits (67), Expect = 1.9
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 187 LVPEPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEESAEEPA 246
L PE E+ + ++ E ++ E + ++ E++ +E E +EE + E E E+
Sbjct: 1503 LSPEEEMLQEDKKLKWEEWKQVWENMLSSKSKEQQYKDEE-EVTLEEEVSREGEEKEQQV 1561
Query: 247 TEEAAAPEEVTKYQ--HEKWDEEAQDAAGKEEK--EEKEKDAENK 287
TEE +E K+ H K + A +E K +E+EK A+ +
Sbjct: 1562 TEEQRHIQEEHKWARIHRKRARAEKKRAQEERKLAQEEEKLAQEE 1606
Score = 29.6 bits (65), Expect = 3.3
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 198 AEMAREPAEEPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEESAEEPATEEAAAPEEVT 257
A+ R+ A+E EEK +E E +LA+E + +++ A + A EE
Sbjct: 1589 AQEERKLAQE--EEKLAQE--ERQLAQEERKLAQAYVKITQDDREMAQAEGKFAQKEETL 1644
Query: 258 KYQHEKWDEEAQDAAGKEEKEEK--EKDAENKVKNSK 292
+ EK +EA+ A K +K K EK A + K +K
Sbjct: 1645 AQRGEKLSQEAEKLAQKRKKLAKKWEKVAREEEKLAK 1681
Score = 29.3 bits (64), Expect = 4.3
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 6/109 (5%)
Query: 183 QEAALVPE-PEVPADLAEMAREPAEEPAEE-KPTEEAAEEELAEEAAEEPAKEEPAAEEE 240
QE L E E+ D+ E++ + E EE K EE +++LAEE + E +EEE
Sbjct: 1710 QEKELAQELEELEWDMEELSWKEEELNQEEGKLVEE--KKKLAEEEEALAWQREKLSEEE 1767
Query: 241 SAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEK--EEKEKDAENK 287
+ E +E EK EE + K E+ E+K K A+ +
Sbjct: 1768 TKLAQEEELLIQEKEKLAQHKEKMPEEEERLGRKREQLIEKKMKLAQKR 1816
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 50.4 bits (119), Expect = 2e-06
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 10/120 (8%)
Query: 174 PEGEGLGLLQEAALVPE--------PEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEE 225
P G L LVPE P + DL + ++E EE+ EE EEE EE
Sbjct: 847 PPVPGPVTLPPPQLVPEGTPGGGGPPALEEDLTVININSSDEEEEEEEEEE--EEEEEEE 904
Query: 226 AAEEPAKEEPAAEEESAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKEEKEKDAE 285
EE +EE EEE EE EE EE + + E +EE ++ +EE+ E+ +D E
Sbjct: 905 EEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEEEDEEEEEELEEVEDLE 964
Score = 45.1 bits (105), Expect = 8e-05
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 214 TEEAAEEELAEEAAEEPAKEEPAAEEESAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAG 273
++E EEE EE EE +EE EE+ EE EE EE + + E+++EE ++ G
Sbjct: 886 SDEEEEEEEEEEEEEEEEEEE---EEDFEEEEEDEEEYFEEE--EEEEEEFEEEFEEEEG 940
Query: 274 KEEKEEKEKDAENK 287
+ E+EE+E+D E +
Sbjct: 941 ELEEEEEEEDEEEE 954
Score = 40.8 bits (94), Expect = 0.001
Identities = 59/233 (25%), Positives = 81/233 (34%), Gaps = 29/233 (12%)
Query: 73 NAEEDSEIRIVEEEEEEEEERNEADNFDLVAAARRYPIRGFRMEFLDMVHSLLLRIYHND 132
N+ ++ E EEEEEEEEE E ++F+ E +
Sbjct: 884 NSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEF-------- 935
Query: 133 HILIRMRGGRLMRRRRTAAPSGSEEPRLLLVHERLGVGAAGPEGEGLGLLQEAALVPEPE 192
G L EE L E L G AG E E G L P
Sbjct: 936 ----EEEEGELEEEEEE---EDEEEEEELEEVEDLEFGTAGGEVEE-GAPPPPTLPPALP 987
Query: 193 VPADLAEMAREPAEEPA-----EEKPTEEAAEEELAEEAAEE--PAKEEPAAEEESA--- 242
P ++ EP EP EE TEE + A A E P++ E E ES
Sbjct: 988 PPESPPKVQPEPEPEPGLLLEVEEPGTEEERGADTAPTLAPEALPSQGEVEREGESPAAG 1047
Query: 243 ---EEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKEEKEKDAENKVKNSK 292
+E EE +AP + + + E ++ Q +EE E + E + K
Sbjct: 1048 PPPQELVEEEPSAPPTLLEEETEDGSDKVQPPPETPAEEEMETETEAEALQEK 1100
Score = 37.7 bits (86), Expect = 0.012
Identities = 40/113 (35%), Positives = 48/113 (42%), Gaps = 12/113 (10%)
Query: 174 PEGEGLGLLQEAALV----PEPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEE 229
P G G L+E V E + E E EE EE+ EE EEE EE EE
Sbjct: 866 PGGGGPPALEEDLTVININSSDEEEEEEEEEEEEEEEEEEEEEDFEE--EEEDEEEYFEE 923
Query: 230 PAKEEPAAEEESAEEPATEEAAAPEEVTKYQHEKWDEEAQD----AAGKEEKE 278
+EE EEE EE E EE + + E EE +D AG E +E
Sbjct: 924 EEEEEEEFEEEFEEEEGELEEEEEEEDEEEEEEL--EEVEDLEFGTAGGEVEE 974
Score = 34.7 bits (78), Expect = 0.10
Identities = 59/208 (28%), Positives = 75/208 (36%), Gaps = 40/208 (19%)
Query: 56 EEEGEQAAGLAAAPGGGNAEEDSEIRIVEEEEEEEEERNEADNFDLVAAARRYPIRGFRM 115
EEE E+ G EE+ E EE+EEEEEE E ++ + A G
Sbjct: 924 EEEEEEEFEEEFEEEEGELEEEEE----EEDEEEEEELEEVEDLEFGTAG------GEVE 973
Query: 116 EFLDMVHSLLLRIYHNDHILIRMRGGRLMRRRRTAAPSGSEEPRLLLVHERLGVGAAGPE 175
E +L + + P EP LLL E G E
Sbjct: 974 EGAPPPPTLPPALPPPE-------------SPPKVQPEPEPEPGLLLEVEEPGT----EE 1016
Query: 176 GEGLGLLQEAALVPEPEVPADLAEMAREPAEEPAEEKPTEEAAEEE-------LAEEAAE 228
G + A PE E+ RE E PA P +E EEE L EE +
Sbjct: 1017 ERG----ADTAPTLAPEALPSQGEVERE-GESPAAGPPPQELVEEEPSAPPTLLEEETED 1071
Query: 229 EPAKEEPAAEEESAEEPATE-EAAAPEE 255
K +P E + EE TE EA A +E
Sbjct: 1072 GSDKVQPPPETPAEEEMETETEAEALQE 1099
Score = 29.6 bits (65), Expect = 3.3
Identities = 33/118 (27%), Positives = 41/118 (34%), Gaps = 9/118 (7%)
Query: 152 PSGSEEPRLLLVHERLGVGAAGPEGEGLGLLQEAALVPEPEVPADLAEMAREPAEEPAEE 211
P EP LLL E G E G + A PE E+ RE A
Sbjct: 997 PEPEPEPGLLLEVEEPGT----EEERGA----DTAPTLAPEALPSQGEVEREGESPAAGP 1048
Query: 212 KPTEEAAEEELAEEA-AEEPAKEEPAAEEESAEEPATEEAAAPEEVTKYQHEKWDEEA 268
P E EE A EE ++ + E PA EE E Q ++ D+ A
Sbjct: 1049 PPQELVEEEPSAPPTLLEEETEDGSDKVQPPPETPAEEEMETETEAEALQEKEQDDTA 1106
>gi|48255891 protein kinase C substrate 80K-H isoform 2 [Homo
sapiens]
Length = 525
Score = 50.4 bits (119), Expect = 2e-06
Identities = 38/105 (36%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 192 EVPADLAEMAREPAEE--PAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEE-SAEEPATE 248
++PA A EP EE P PTEE EEE EE EE +EE + E E+P
Sbjct: 288 DLPAPSAPDLTEPKEEQPPVPSSPTEEEEEEE--EEEEEEAEEEEEEEDSEVQGEQPKPA 345
Query: 249 EAAAPEEVTKY--QHEKWDEEAQDAAGK-EEKEEKEKDAENKVKN 290
A +++ Y Q + + + AQ+A K EE E KD E ++N
Sbjct: 346 SPAEEDKMPPYDEQTQAFIDAAQEARNKFEEAERSLKDMEESIRN 390
Score = 34.3 bits (77), Expect = 0.13
Identities = 27/95 (28%), Positives = 41/95 (43%)
Query: 190 EPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEESAEEPATEE 249
E E +AE+ RE + A EE ++ E A ++ ++ EE
Sbjct: 123 ERESLQQMAEVTREGFRLKKILIEDWKKAREEKQKKLIELQAGKKSLEDQVEMLRTVKEE 182
Query: 250 AAAPEEVTKYQHEKWDEEAQDAAGKEEKEEKEKDA 284
A PE K QH+K EE AA ++++E DA
Sbjct: 183 AEKPEREAKEQHQKLWEEQLAAAKAQQEQELAADA 217
Score = 30.8 bits (68), Expect = 1.5
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 235 PAAEEESAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKEEKEKDAENKVKNSK 292
PA EP E+ P T+ + E+ +EE +EE EE+E++ +++V+ +
Sbjct: 290 PAPSAPDLTEPKEEQPPVPSSPTEEEEEEEEEE------EEEAEEEEEEEDSEVQGEQ 341
>gi|21361639 DIPB protein [Homo sapiens]
Length = 344
Score = 47.8 bits (112), Expect = 1e-05
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 194 PADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEESAEEPATEEAAAP 253
PAD +E AE E+ E E+ EA EE EE + EE +E E +
Sbjct: 70 PADGEGAGKEEAEVKVEQ-------EREIESEAGEESESEEESESEEESETEEESEDESD 122
Query: 254 EEVTKYQHEKWDEEAQDAAGKEEKEEKEKDAENKVK 289
EE + E+ ++E + A ++ +EE E +AE + +
Sbjct: 123 EESEEDSEEEMEDEQESEAEEDNQEEGESEAEGETE 158
Score = 45.4 bits (106), Expect = 6e-05
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Query: 175 EGEGLGLLQ-EAALVPEPEVPADLAEMAREPAE-EPAEEKPTEEAAEEELAEEAAEEPAK 232
+GEG G + E + E E+ ++ E + E E EE TEE +E+E EE+ E+ +
Sbjct: 72 DGEGAGKEEAEVKVEQEREIESEAGEESESEEESESEEESETEEESEDESDEESEEDSEE 131
Query: 233 EEPAAEEESAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKEE 279
E +E AEE EE + E ++D E + A + K +
Sbjct: 132 EMEDEQESEAEEDNQEEGESEAEGETEAESEFDPEIEMEAERVAKRK 178
Score = 45.1 bits (105), Expect = 8e-05
Identities = 36/122 (29%), Positives = 48/122 (39%), Gaps = 8/122 (6%)
Query: 168 GVGAAGPEGEGLGLLQEAALVPEPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAA 227
G A P +G G +E A V E RE E EE +EE +E E E
Sbjct: 63 GSQAWTPPADGEGAGKEEAEVK--------VEQEREIESEAGEESESEEESESEEESETE 114
Query: 228 EEPAKEEPAAEEESAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKEEKEKDAENK 287
EE E EE +EE +E + E + + + E + A E E E +AE
Sbjct: 115 EESEDESDEESEEDSEEEMEDEQESEAEEDNQEEGESEAEGETEAESEFDPEIEMEAERV 174
Query: 288 VK 289
K
Sbjct: 175 AK 176
Score = 39.7 bits (91), Expect = 0.003
Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 21/137 (15%)
Query: 168 GVGAAGPEGEGLGLLQEAALVPEPEVPADLAEMARE--------PAEEPAEEKPTEEAAE 219
GVGAA E G E EP+ E+ RE AE ++ + AE
Sbjct: 4 GVGAAFEELPHDGTCDEC----EPDEAPGAEEVCRECGFCYCRRHAEAHRQKFLSHHLAE 59
Query: 220 EELAEEAAEEPAKEEPAAEEES---------AEEPATEEAAAPEEVTKYQHEKWDEEAQD 270
+A PA E A +EE+ E A EE+ + EE + + +EE++D
Sbjct: 60 YVHGSQAWTPPADGEGAGKEEAEVKVEQEREIESEAGEESESEEESESEEESETEEESED 119
Query: 271 AAGKEEKEEKEKDAENK 287
+ +E +E+ E++ E++
Sbjct: 120 ESDEESEEDSEEEMEDE 136
Score = 39.3 bits (90), Expect = 0.004
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 214 TEEAAEEELAEEAAEEPAKEEPAAEEESAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAG 273
T A E +E AE ++E E E+ EE +EE + EE ++ + E DE +++
Sbjct: 68 TPPADGEGAGKEEAEVKVEQEREIESEAGEESESEEESESEEESETEEESEDESDEESEE 127
Query: 274 KEEKE-EKEKDAENKVKNSK 292
E+E E E+++E + N +
Sbjct: 128 DSEEEMEDEQESEAEEDNQE 147
Score = 33.9 bits (76), Expect = 0.18
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 153 SGSEEPRLLLVHERLGVGAAGPEGEGLGLLQEAALVPEPEVPADLAEMAREPAEEPAEEK 212
+G EE + + ER AG E E +E + E E ++ E + + ++E +EE
Sbjct: 76 AGKEEAEVKVEQEREIESEAGEESES----EEES---ESEEESETEEESEDESDEESEED 128
Query: 213 PTEEAAEEELAEEAAEEPAKEEPAAEEESAEEPATE 248
+EE E+E E AEE +EE +E E E +E
Sbjct: 129 -SEEEMEDE-QESEAEEDNQEEGESEAEGETEAESE 162
>gi|21493022 A kinase (PRKA) anchor protein 12 isoform 1 [Homo
sapiens]
Length = 1782
Score = 47.8 bits (112), Expect = 1e-05
Identities = 66/291 (22%), Positives = 121/291 (41%), Gaps = 40/291 (13%)
Query: 42 NTVAGVAGPMRGLGEEEGEQAAGLAAAPGGG--NAEEDSEIRIVEEEEEEEEERNEADNF 99
+T+ GVA L +EG+ A G G N++E+ E+ + E + + E+ ++ D+
Sbjct: 63 STINGVA-EQDELSLQEGDLNGQKGALNGQGALNSQEEEEVIVTEVGQRDSEDVSKRDS- 120
Query: 100 DLVAAARRYPIRGFRMEFLDMVHSLLLRIYHNDHILIRM--------------RGGRLMR 145
D A + + + + ++ +I ++ L + + + +
Sbjct: 121 DKEMATKSAVVHDITDDGQEETPEIIEQIPSSESNLEELTQPTESQANDIGFKKVFKFVG 180
Query: 146 RRRTAAPSGSEEP---RLLLVHERLGVGAAGP---EGEGLGLLQEAALVPEPEVPADLAE 199
+ T +E+P +LL V + G GAAG + LG + A+ EP+ + E
Sbjct: 181 FKFTVKKDKTEKPDTVQLLTVKKDEGEGAAGAGDHKDPSLGAGEAASKESEPKQSTEKPE 240
Query: 200 MAREPAEEPAEEKPTEEAAEE-ELAEEAAEEPAKEEPAAEEESAEEPATEEA-------- 250
+ + AE P E+ + E +E EE ++EP+ ES P T E
Sbjct: 241 ETLKREQSHAEISPPAESGQAVEECKEEGEEKQEKEPSKSAESPTSPVTSETGSTFKKFF 300
Query: 251 ----AAPEEVTKYQHEKWDEEAQDAAGKEEKEEK---EKDAENKVKNSKGT 294
A + T ++ K DE KE++ EK E+D + +V + K T
Sbjct: 301 TQGWAGWRKKTSFRKPKEDEVEASEKKKEQEPEKVDTEEDGKAEVASEKLT 351
Score = 34.3 bits (77), Expect = 0.13
Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 2/97 (2%)
Query: 175 EGEGLGLLQEAALVPEPEVPADLAEM--AREPAEEPAEEKPTEEAAEEELAEEAAEEPAK 232
E G ++ EA L PE A+ A A E E A E+ TE + ++ + +
Sbjct: 959 EARGDTVVSEAELTPEAVTAAETAGPLGAEEGTEASAAEETTEMVSAVSQLTDSPDTTEE 1018
Query: 233 EEPAAEEESAEEPATEEAAAPEEVTKYQHEKWDEEAQ 269
P E E E+ +EV + EK EE+Q
Sbjct: 1019 ATPVQEVEGGVPDIEEQERRTQEVLQAVAEKVKEESQ 1055
Score = 33.9 bits (76), Expect = 0.18
Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 13/103 (12%)
Query: 190 EPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEESAEEPATEE 249
E EV A + +EP + EE E A E+L A+E+ +EPA ESA EP
Sbjct: 318 EDEVEASEKKKEQEPEKVDTEEDGKAEVASEKLT--ASEQAHPQEPA---ESAHEPRLS- 371
Query: 250 AAAPEEVTKYQHEKWDEEAQDAAGKEEKEEKEKDAENKVKNSK 292
+Y+ + E Q + + EEK +V + K
Sbjct: 372 -------AEYEKVELPSEEQVSGSQGPSEEKPAPLATEVFDEK 407
Score = 33.9 bits (76), Expect = 0.18
Identities = 37/142 (26%), Positives = 58/142 (40%), Gaps = 10/142 (7%)
Query: 147 RRTAAPSGSEEPRLLLVHERLGVGAAGPEGEGLGLLQEAALVPEPEVPADLAEMAREPAE 206
RR P G +E + V AGP G A+VP E A E
Sbjct: 814 RRKKRPDGKQE--------QAPVEDAGPTGANEDDSDVPAVVPLSEYDAVEREKMEAQQA 865
Query: 207 EPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEESAEEPATEEAAAPEEVTKYQHEKWDE 266
+ + E+P ++AA E+++E +E AA + E +P ++ E ++
Sbjct: 866 QKSAEQPEQKAA-TEVSKELSESQVHMMAAAVADGTRAATIIEERSPSWISASVTEPLEQ 924
Query: 267 -EAQDAAGKEEKEEKEKDAENK 287
EA+ A EE E+E AE +
Sbjct: 925 VEAEAALLTEEVLEREVIAEEE 946
Score = 32.7 bits (73), Expect = 0.39
Identities = 31/101 (30%), Positives = 42/101 (41%), Gaps = 7/101 (6%)
Query: 185 AALVPEPEVPADLAEMAREPAEEPAEEKP--TEEAAEEELAEEAAEEPAKEEPAAEEESA 242
AA + E P+ ++ EP E+ E TEE E E+ E E P EP E A
Sbjct: 902 AATIIEERSPSWISASVTEPLEQVEAEAALLTEEVLEREVIAEE-EPPTVTEPLPENREA 960
Query: 243 --EEPATEEAAAPEEVTKYQ--HEKWDEEAQDAAGKEEKEE 279
+ +E PE VT + EE +A+ EE E
Sbjct: 961 RGDTVVSEAELTPEAVTAAETAGPLGAEEGTEASAAEETTE 1001
Score = 32.3 bits (72), Expect = 0.51
Identities = 31/117 (26%), Positives = 47/117 (40%), Gaps = 6/117 (5%)
Query: 175 EGEGLGLLQEAALVPEPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEA-AEEPAKE 233
EG G G VPE + A LAE + EP E++ ++ + E A A+ A
Sbjct: 1666 EGGGAGTKS----VPEDDGHALLAERIEKSLVEPKEDEKGDDVDDPENQNSALADTDASG 1721
Query: 234 EPAAEEESAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKEEKEKDAENKVKN 290
E P +E +EV + Q K E+ A + +EE +K K+
Sbjct: 1722 GLTKESPDTNGPKQKEKEDAQEV-ELQEGKVHSESDKAITPQAQEELQKQERESAKS 1777
Score = 30.4 bits (67), Expect = 1.9
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 8/82 (9%)
Query: 212 KPTEEAAEEELAEEAAEEPAKEEPAAEEESAEEPATEEAAAPEEVTKYQHEKWDEEAQDA 271
K E A E+ E+ E+ EE E ++E+ E A P+E E A +
Sbjct: 317 KEDEVEASEKKKEQEPEKVDTEEDGKAEVASEKLTASEQAHPQEPA--------ESAHEP 368
Query: 272 AGKEEKEEKEKDAENKVKNSKG 293
E E+ E +E +V S+G
Sbjct: 369 RLSAEYEKVELPSEEQVSGSQG 390
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.302 0.125 0.337
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,645,605
Number of Sequences: 37866
Number of extensions: 831483
Number of successful extensions: 24986
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 743
Number of HSP's that attempted gapping in prelim test: 7411
Number of HSP's gapped (non-prelim): 10237
length of query: 294
length of database: 18,247,518
effective HSP length: 101
effective length of query: 193
effective length of database: 14,423,052
effective search space: 2783649036
effective search space used: 2783649036
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.