LOC727838 21209

Name: LOC727838	Sequence: fasta or formatted (290aa)		NCBI GI: 239752405
Description: PREDICTED: similar to cancer/testis antigen family 147, member B1		Not currently referenced in the text
Other entries for this name: alt prot {284aa} PREDICTED: similar to cancer/testis antigen family 147, member B1... alt prot {294aa} PREDICTED: similar to cancer/testis antigen family 147, member B1...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 13.8 40 3 C cysteine 0.0 0 0 D aspartate 5.2 15 1 E glutamate 21.7 63 8 F phenylalanine 1.0 3 1 G glycine 10.3 30 3 H histidine 1.7 5 1 I isoleucine 2.4 7 1 K lysine 3.8 11 1 L leucine 6.9 20 3 M methionine 2.4 7 1 N asparagine 2.8 8 1 P proline 5.5 16 1 Q glutamine 3.8 11 1 R arginine 5.9 17 2 S serine 4.1 12 1 T threonine 2.8 8 1 V valine 4.1 12 1 W tryptophan 0.3 1 1 X unknown 0.3 1 1 Y tyrosine 1.0 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to cancer/testis antigen family ... LOC727838 0.923 PREDICTED: similar to cancer/testis antigen family ... LOC727838 0.895 PREDICTED: similar to cancer/testis antigen family ... CT47B1 0.591 cancer/testis antigen family 147, member B1 CT47A1 0.580 cancer/testis antigen family 47, member A1 CT47A2 0.580 cancer/testis antigen family 47, member A2 CT47A3 0.580 cancer/testis antigen family 47, member A3 CT47A4 0.580 cancer/testis antigen family 47, member A4 CT47A5 0.580 cancer/testis antigen family 47, member A5 CT47A6 0.580 cancer/testis antigen family 47, member A6 CT47A7 0.580 cancer/testis antigen family 47, member A7 CT47A8 0.580 cancer/testis antigen family 47, member A8 CT47A9 0.580 cancer/testis antigen family 47, member A9 CT47A10 0.580 cancer/testis antigen family 47, member A10 CT47A11 0.580 cancer/testis antigen family 47, member A11 RPGR 0.072 retinitis pigmentosa GTPase regulator isoform C [Hom... NEFM 0.059 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.059 neurofilament, medium polypeptide 150kDa isoform 2 ... CCDC96 0.055 coiled-coil domain containing 96 NEFL 0.053 neurofilament, light polypeptide 68kDa MYT1 0.053 myelin transcription factor 1 PELP1 0.053 proline, glutamic acid and leucine rich protein 1 [... PRKCSH 0.050 protein kinase C substrate 80K-H isoform 2 RP1L1 0.048 retinitis pigmentosa 1-like 1 PRKCSH 0.046 protein kinase C substrate 80K-H isoform 1 WDR87 0.046 NYD-SP11 protein BRD2 0.044 bromodomain containing 2 BRD2 0.044 bromodomain containing 2 TRIM44 0.044 DIPB protein LOC100294088 0.044 PREDICTED: hypothetical protein, partial Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.