LOC727838 1332

Name: LOC727838	Sequence: fasta or formatted (284aa)		NCBI GI: 113430055
Description: PREDICTED: similar to cancer/testis antigen family 147, member B1 isoform 1		Not currently referenced in the text
Other entries for this name: alt prot {294aa} PREDICTED: similar to cancer/testis antigen family 147, member B1... alt prot {290aa} PREDICTED: similar to cancer/testis antigen family 147, member B1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 15.1 43 3 C cysteine 0.0 0 0 D aspartate 5.3 15 1 E glutamate 21.5 61 8 F phenylalanine 1.1 3 1 G glycine 9.9 28 3 H histidine 1.8 5 1 I isoleucine 2.5 7 1 K lysine 3.5 10 1 L leucine 7.0 20 3 M methionine 2.5 7 1 N asparagine 2.8 8 1 P proline 6.0 17 1 Q glutamine 3.2 9 1 R arginine 6.7 19 4 S serine 3.2 9 1 T threonine 2.1 6 1 V valine 4.6 13 1 W tryptophan 0.4 1 1 Y tyrosine 1.1 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to cancer/testis antigen family ... LOC727838 0.978 PREDICTED: similar to cancer/testis antigen family ... LOC727838 0.912 PREDICTED: similar to cancer/testis antigen family ... CT47B1 0.611 cancer/testis antigen family 147, member B1 CT47A1 0.604 cancer/testis antigen family 47, member A1 CT47A2 0.604 cancer/testis antigen family 47, member A2 CT47A3 0.604 cancer/testis antigen family 47, member A3 CT47A4 0.604 cancer/testis antigen family 47, member A4 CT47A5 0.604 cancer/testis antigen family 47, member A5 CT47A6 0.604 cancer/testis antigen family 47, member A6 CT47A7 0.604 cancer/testis antigen family 47, member A7 CT47A8 0.604 cancer/testis antigen family 47, member A8 CT47A9 0.604 cancer/testis antigen family 47, member A9 CT47A10 0.604 cancer/testis antigen family 47, member A10 CT47A11 0.604 cancer/testis antigen family 47, member A11 RPGR 0.058 retinitis pigmentosa GTPase regulator isoform C [Hom... MYT1 0.056 myelin transcription factor 1 NEFL 0.056 neurofilament, light polypeptide 68kDa RP1L1 0.054 retinitis pigmentosa 1-like 1 NEFM 0.049 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.049 neurofilament, medium polypeptide 150kDa isoform 2 ... CCDC96 0.047 coiled-coil domain containing 96 NEFH 0.047 neurofilament, heavy polypeptide 200kDa PELP1 0.045 proline, glutamic acid and leucine rich protein 1 [... TRIM44 0.043 DIPB protein C4orf40 0.041 hypothetical protein LOC401137 ZFHX3 0.041 AT-binding transcription factor 1 WDR87 0.039 NYD-SP11 protein PRKCSH 0.037 protein kinase C substrate 80K-H isoform 2 MYST3 0.037 MYST histone acetyltransferase (monocytic leukemia)... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.