C4orf40 5813

Name: C4orf40	Sequence: fasta or formatted (219aa)		NCBI GI: 156071476
Description: hypothetical protein LOC401137		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 20.1 44 4 C cysteine 0.9 2 1 D aspartate 2.3 5 2 E glutamate 6.8 15 2 F phenylalanine 4.1 9 2 G glycine 5.0 11 1 H histidine 1.8 4 1 I isoleucine 3.2 7 1 K lysine 1.4 3 1 L leucine 6.4 14 3 M methionine 0.5 1 1 N asparagine 3.2 7 1 P proline 20.5 45 3 Q glutamine 1.4 3 1 R arginine 3.7 8 2 S serine 4.1 9 1 T threonine 4.1 9 1 V valine 5.9 13 1 W tryptophan 0.9 2 1 Y tyrosine 3.7 8 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC401137 KRTAP4-6 0.120 PREDICTED: keratin associated protein 4.6 KRTAP4-9 0.115 PREDICTED: keratin associated protein 4-9 COL6A3 0.099 alpha 3 type VI collagen isoform 5 precursor COL6A3 0.099 alpha 3 type VI collagen isoform 1 precursor COL6A3 0.099 alpha 3 type VI collagen isoform 4 precursor SAMD1 0.090 sterile alpha motif domain containing 1 KIAA0754 0.090 hypothetical protein LOC643314 AMOT 0.085 angiomotin isoform 2 AMOT 0.085 angiomotin isoform 1 FLJ22184 0.083 PREDICTED: hypothetical protein FLJ22184 TMPRSS13 0.081 transmembrane protease, serine 13 PCLO 0.079 piccolo isoform 2 PCLO 0.079 piccolo isoform 1 FLJ22184 0.079 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.079 PREDICTED: hypothetical protein LOC80164 WIPF3 0.074 WAS/WASL interacting protein family, member 3 [Homo... FAM48B1 0.074 hypothetical protein LOC100130302 MLL2 0.069 myeloid/lymphoid or mixed-lineage leukemia 2 CASKIN1 0.065 CASK interacting protein 1 CDKN1C 0.065 cyclin-dependent kinase inhibitor 1C isoform b [Hom... CDKN1C 0.065 cyclin-dependent kinase inhibitor 1C isoform b [Hom... CDKN1C 0.065 cyclin-dependent kinase inhibitor 1C isoform a BCORL1 0.062 BCL6 co-repressor-like 1 SALL3 0.062 sal-like 3 EIF3F 0.062 eukaryotic translation initiation factor 3, subunit 5... MAZ 0.060 MYC-associated zinc finger protein isoform 2 MAZ 0.060 MYC-associated zinc finger protein isoform 1 LOC727838 0.060 PREDICTED: similar to cancer/testis antigen family ... TAF4 0.060 TBP-associated factor 4 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.