TJP1 1933

Name: TJP1	Sequence: fasta or formatted (1748aa)		NCBI GI: 116875767
Description: tight junction protein 1 isoform a		Referenced in: Gap Junctions and Tight Junctions PDZ Domain
Other entries for this name: alt prot [1668aa] tight junction protein 1 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.5 113 4 C cysteine 0.3 6 1 D aspartate 6.2 108 2 E glutamate 8.0 139 4 F phenylalanine 2.8 49 1 G glycine 5.1 89 2 H histidine 3.3 57 2 I isoleucine 3.9 68 3 K lysine 6.1 106 3 L leucine 6.3 110 2 M methionine 1.1 19 2 N asparagine 4.0 70 2 P proline 9.9 173 5 Q glutamine 5.0 87 4 R arginine 6.8 118 2 S serine 10.3 180 3 T threonine 4.9 86 3 V valine 5.9 103 2 W tryptophan 0.5 9 1 Y tyrosine 3.3 58 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tight junction protein 1 isoform a TJP1 0.893 tight junction protein 1 isoform b TJP2 0.209 tight junction protein 2 (zona occludens 2) isoform ... TJP2 0.205 tight junction protein 2 (zona occludens 2) isoform ... TJP3 0.180 tight junction protein 3 DLG1 0.036 discs, large homolog 1 isoform 1 DLG5 0.036 discs large homolog 5 DLG1 0.033 discs, large homolog 1 isoform 2 DLG3 0.033 synapse-associated protein 102 isoform a DLG4 0.032 post-synaptic density protein 95 isoform 1 DLG4 0.032 post-synaptic density protein 95 isoform 2 DLG2 0.032 chapsyn-110 isoform 1 DLG2 0.032 chapsyn-110 isoform 2 DLG2 0.031 chapsyn-110 isoform 3 DLG3 0.029 synapse-associated protein 102 isoform b DLG2 0.021 chapsyn-110 isoform 4 LOC126987 0.018 PREDICTED: similar to hCG2040319 LOC126987 0.018 PREDICTED: similar to hCG2040319 LOC126987 0.018 PREDICTED: similar to hCG2040319 INADL 0.017 InaD-like MPP5 0.016 membrane protein, palmitoylated 5 UNC5C 0.015 unc5C PTPN13 0.015 protein tyrosine phosphatase, non-receptor type 13 i... PTPN13 0.015 protein tyrosine phosphatase, non-receptor type 13 i... PTPN13 0.015 protein tyrosine phosphatase, non-receptor type 13 is... SCRIB 0.015 scribble isoform b SCRIB 0.015 scribble isoform a PTPN13 0.014 protein tyrosine phosphatase, non-receptor type 13 i... UNC5B 0.013 unc-5 homolog B MAGI3 0.013 membrane-associated guanylate kinase-related 3 iso... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.