Guide to the Human Genome
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Name: DLG3 Sequence: fasta or formatted (512aa) NCBI GI: 119943108
Description:

synapse-associated protein 102 isoform b

Referenced in:

PDZ Domain
Synapses

Other entries for this name:
alt prot [817aa] synapse-associated protein 102 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         35           4
 C cysteine            0.6          3           1
 D aspartate           5.1         26           2
 E glutamate           7.8         40           2
 F phenylalanine       3.7         19           1
 G glycine             7.4         38           2
 H histidine           2.3         12           1
 I isoleucine          7.0         36           2
 K lysine              6.6         34           2
 L leucine             6.4         33           1
 M methionine          2.3         12           2
 N asparagine          3.5         18           1
 P proline             3.7         19           1
 Q glutamine           5.3         27           2
 R arginine            8.4         43           2
 S serine             10.4         53           3
 T threonine           3.3         17           2
 V valine              4.9         25           2
 W tryptophan          1.2          6           2
 Y tyrosine            3.1         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   synapse-associated protein 102 isoform b 
DLG3                  0.804   synapse-associated protein 102 isoform a 
DLG1                  0.725   discs, large homolog 1 isoform 2 
DLG2                  0.719   chapsyn-110 isoform 1 
DLG2                  0.719   chapsyn-110 isoform 2 
DLG1                  0.682   discs, large homolog 1 isoform 1 
DLG2                  0.673   chapsyn-110 isoform 3 
DLG4                  0.569   post-synaptic density protein 95 isoform 1 
DLG4                  0.569   post-synaptic density protein 95 isoform 2 
DLG2                  0.494   chapsyn-110 isoform 4 
MPP5                  0.177   membrane protein, palmitoylated 5 
MPP7                  0.172   palmitoylated membrane protein 7 
MPP3                  0.156   palmitoylated membrane protein 3 
DLG5                  0.148   discs large homolog 5 
MPP2                  0.142   palmitoylated membrane protein 2 
CASK                  0.140   calcium/calmodulin-dependent serine protein kinase ...
CASK                  0.136   calcium/calmodulin-dependent serine protein kinase ...
MPP1                  0.135   palmitoylated membrane protein 1 
CASK                  0.134   calcium/calmodulin-dependent serine protein kinase ...
MPP6                  0.134   membrane protein, palmitoylated 6 
MPP4                  0.130   membrane protein, palmitoylated 4 
TJP3                  0.105   tight junction protein 3 
TJP1                  0.104   tight junction protein 1 isoform b 
TJP1                  0.104   tight junction protein 1 isoform a 
TJP2                  0.088   tight junction protein 2 (zona occludens 2) isoform ...
TJP2                  0.088   tight junction protein 2 (zona occludens 2) isoform ...
GUK1                  0.078   guanylate kinase 1 isoform b 
GUK1                  0.078   guanylate kinase 1 isoform a 
GUK1                  0.078   guanylate kinase 1 isoform b 
LIN7B                 0.059   lin-7 homolog B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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