Guide to the Human Genome
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Name: DLG2 Sequence: fasta or formatted (749aa) NCBI GI: 218156340
Description:

chapsyn-110 isoform 3

Referenced in:

PDZ Domain
Synapses

Other entries for this name:
alt prot [334aa] chapsyn-110 isoform 4
alt prot [975aa] chapsyn-110 isoform 1
alt prot [870aa] chapsyn-110 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         42           4
 C cysteine            0.7          5           1
 D aspartate           6.3         47           3
 E glutamate           7.7         58           2
 F phenylalanine       2.9         22           1
 G glycine             9.1         68           2
 H histidine           2.5         19           1
 I isoleucine          7.6         57           2
 K lysine              5.9         44           2
 L leucine             7.7         58           2
 M methionine          2.3         17           2
 N asparagine          3.6         27           2
 P proline             5.1         38           2
 Q glutamine           4.5         34           1
 R arginine            6.0         45           4
 S serine              7.1         53           2
 T threonine           4.7         35           2
 V valine              6.4         48           2
 W tryptophan          0.5          4           2
 Y tyrosine            3.7         28           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   chapsyn-110 isoform 3 
DLG2                  0.903   chapsyn-110 isoform 1 
DLG2                  0.903   chapsyn-110 isoform 2 
DLG1                  0.718   discs, large homolog 1 isoform 1 
DLG3                  0.710   synapse-associated protein 102 isoform a 
DLG1                  0.708   discs, large homolog 1 isoform 2 
DLG4                  0.646   post-synaptic density protein 95 isoform 1 
DLG4                  0.646   post-synaptic density protein 95 isoform 2 
DLG3                  0.453   synapse-associated protein 102 isoform b 
DLG2                  0.441   chapsyn-110 isoform 4 
MPP5                  0.123   membrane protein, palmitoylated 5 
DLG5                  0.111   discs large homolog 5 
MPP7                  0.108   palmitoylated membrane protein 7 
MPP3                  0.107   palmitoylated membrane protein 3 
MPP2                  0.100   palmitoylated membrane protein 2 
MPP6                  0.094   membrane protein, palmitoylated 6 
CASK                  0.089   calcium/calmodulin-dependent serine protein kinase ...
MPP1                  0.087   palmitoylated membrane protein 1 
CASK                  0.086   calcium/calmodulin-dependent serine protein kinase ...
SCRIB                 0.086   scribble isoform b 
SCRIB                 0.086   scribble isoform a 
CASK                  0.085   calcium/calmodulin-dependent serine protein kinase ...
TJP3                  0.084   tight junction protein 3 
TJP2                  0.075   tight junction protein 2 (zona occludens 2) isoform ...
TJP2                  0.075   tight junction protein 2 (zona occludens 2) isoform ...
TJP1                  0.073   tight junction protein 1 isoform b 
TJP1                  0.073   tight junction protein 1 isoform a 
INADL                 0.073   InaD-like 
MPDZ                  0.066   multiple PDZ domain protein 
MPP4                  0.066   membrane protein, palmitoylated 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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