Guide to the Human Genome
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Name: DLG2 Sequence: fasta or formatted (975aa) NCBI GI: 218156338
Description:

chapsyn-110 isoform 1

Referenced in:

Gene Structure
PDZ Domain
Synapses

Other entries for this name:
alt prot [334aa] chapsyn-110 isoform 4
alt prot [749aa] chapsyn-110 isoform 3
alt prot [870aa] chapsyn-110 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         50           4
 C cysteine            1.3         13           1
 D aspartate           5.8         57           3
 E glutamate           8.4         82           2
 F phenylalanine       3.2         31           1
 G glycine             7.2         70           2
 H histidine           3.1         30           2
 I isoleucine          6.6         64           2
 K lysine              6.4         62           2
 L leucine             7.8         76           2
 M methionine          1.8         18           2
 N asparagine          4.1         40           2
 P proline             5.7         56           2
 Q glutamine           4.7         46           1
 R arginine            5.3         52           4
 S serine              8.2         80           2
 T threonine           4.8         47           3
 V valine              6.2         60           2
 W tryptophan          0.5          5           2
 Y tyrosine            3.7         36           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   chapsyn-110 isoform 1 
DLG2                  0.874   chapsyn-110 isoform 2 
DLG2                  0.678   chapsyn-110 isoform 3 
DLG1                  0.611   discs, large homolog 1 isoform 2 
DLG1                  0.587   discs, large homolog 1 isoform 1 
DLG3                  0.504   synapse-associated protein 102 isoform a 
DLG4                  0.486   post-synaptic density protein 95 isoform 2 
DLG4                  0.483   post-synaptic density protein 95 isoform 1 
DLG3                  0.367   synapse-associated protein 102 isoform b 
DLG2                  0.310   chapsyn-110 isoform 4 
MPP5                  0.097   membrane protein, palmitoylated 5 
MPP7                  0.089   palmitoylated membrane protein 7 
MPP3                  0.081   palmitoylated membrane protein 3 
MPP2                  0.079   palmitoylated membrane protein 2 
DLG5                  0.076   discs large homolog 5 
MPP4                  0.074   membrane protein, palmitoylated 4 
MPP6                  0.073   membrane protein, palmitoylated 6 
CASK                  0.068   calcium/calmodulin-dependent serine protein kinase ...
MPP1                  0.067   palmitoylated membrane protein 1 
TJP3                  0.067   tight junction protein 3 
CASK                  0.065   calcium/calmodulin-dependent serine protein kinase ...
CASK                  0.065   calcium/calmodulin-dependent serine protein kinase ...
SCRIB                 0.062   scribble isoform b 
SCRIB                 0.062   scribble isoform a 
MPDZ                  0.059   multiple PDZ domain protein 
TJP1                  0.058   tight junction protein 1 isoform b 
TJP1                  0.058   tight junction protein 1 isoform a 
TJP2                  0.058   tight junction protein 2 (zona occludens 2) isoform ...
TJP2                  0.058   tight junction protein 2 (zona occludens 2) isoform ...
INADL                 0.049   InaD-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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