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Search of human proteins with 239743686
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239743686 PREDICTED: hypothetical protein XP_002342934 [Homo
sapiens]
(68 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239743686 PREDICTED: hypothetical protein XP_002342934 [Homo ... 131 1e-31
gi|239755031 PREDICTED: hypothetical protein [Homo sapiens] 129 6e-31
gi|239749536 PREDICTED: hypothetical protein XP_002347073 [Homo ... 129 6e-31
gi|223671856 coiled-coil domain containing 85C [Homo sapiens] 35 0.010
gi|169171347 PREDICTED: hypothetical protein [Homo sapiens] 34 0.028
gi|169172209 PREDICTED: hypothetical protein [Homo sapiens] 34 0.028
gi|169170953 PREDICTED: hypothetical protein [Homo sapiens] 34 0.028
gi|239508753 PREDICTED: hypothetical protein [Homo sapiens] 34 0.028
gi|24497554 homeobox A13 [Homo sapiens] 33 0.037
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens] 33 0.049
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens] 33 0.049
gi|9966841 cell death regulator aven [Homo sapiens] 33 0.049
gi|214832074 LIM domain only 2 isoform 1 [Homo sapiens] 32 0.083
gi|61835232 growth differentiation factor 7 preproprotein [Homo ... 32 0.083
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 32 0.083
gi|28872761 myotubularin-related protein 1 [Homo sapiens] 32 0.083
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 32 0.083
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 32 0.083
gi|210147522 zinc finger, SWIM-type containing 6 [Homo sapiens] 32 0.11
gi|13775236 scratch [Homo sapiens] 32 0.11
gi|9789947 fibroblast growth factor 20 [Homo sapiens] 32 0.14
gi|221219000 phospholipase C-like 2 isoform 1 [Homo sapiens] 32 0.14
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 31 0.18
gi|24586686 voltage-dependent calcium channel gamma-8 subunit [H... 31 0.18
gi|21717816 solute carrier family 15, member 4 [Homo sapiens] 31 0.24
gi|4506939 sonic hedgehog preproprotein [Homo sapiens] 31 0.24
gi|122937319 even-skipped homeobox 2 [Homo sapiens] 31 0.24
gi|239758008 PREDICTED: hypothetical protein XP_002346266 [Homo ... 30 0.41
gi|239755981 PREDICTED: hypothetical protein XP_002344766 [Homo ... 30 0.41
gi|239754489 PREDICTED: hypothetical protein [Homo sapiens] 30 0.41
>gi|239743686 PREDICTED: hypothetical protein XP_002342934 [Homo
sapiens]
Length = 68
Score = 131 bits (329), Expect = 1e-31
Identities = 68/68 (100%), Positives = 68/68 (100%)
Query: 1 MVQEAALAAAVREGGGGGGLEGRAGRRAPLAASGRAAAGAMGARARSLAGHGLLRRNTLT 60
MVQEAALAAAVREGGGGGGLEGRAGRRAPLAASGRAAAGAMGARARSLAGHGLLRRNTLT
Sbjct: 1 MVQEAALAAAVREGGGGGGLEGRAGRRAPLAASGRAAAGAMGARARSLAGHGLLRRNTLT 60
Query: 61 SRAGDAAS 68
SRAGDAAS
Sbjct: 61 SRAGDAAS 68
>gi|239755031 PREDICTED: hypothetical protein [Homo sapiens]
Length = 68
Score = 129 bits (323), Expect = 6e-31
Identities = 67/68 (98%), Positives = 67/68 (98%)
Query: 1 MVQEAALAAAVREGGGGGGLEGRAGRRAPLAASGRAAAGAMGARARSLAGHGLLRRNTLT 60
MVQEAALAAAVREGGGG GLEGRAGRRAPLAASGRAAAGAMGARARSLAGHGLLRRNTLT
Sbjct: 1 MVQEAALAAAVREGGGGAGLEGRAGRRAPLAASGRAAAGAMGARARSLAGHGLLRRNTLT 60
Query: 61 SRAGDAAS 68
SRAGDAAS
Sbjct: 61 SRAGDAAS 68
>gi|239749536 PREDICTED: hypothetical protein XP_002347073 [Homo
sapiens]
Length = 68
Score = 129 bits (323), Expect = 6e-31
Identities = 67/68 (98%), Positives = 67/68 (98%)
Query: 1 MVQEAALAAAVREGGGGGGLEGRAGRRAPLAASGRAAAGAMGARARSLAGHGLLRRNTLT 60
MVQEAALAAAVREGGGG GLEGRAGRRAPLAASGRAAAGAMGARARSLAGHGLLRRNTLT
Sbjct: 1 MVQEAALAAAVREGGGGAGLEGRAGRRAPLAASGRAAAGAMGARARSLAGHGLLRRNTLT 60
Query: 61 SRAGDAAS 68
SRAGDAAS
Sbjct: 61 SRAGDAAS 68
>gi|223671856 coiled-coil domain containing 85C [Homo sapiens]
Length = 419
Score = 35.4 bits (80), Expect = 0.010
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 5 AALAAAVREGGGGGGLEGRAGRRAPLAASGRAAAGAMGARARSLAGHGLLRRNTLTSRAG 64
AA AA GGGGGG R+ + + SG + GA GA AR + G G + TS AG
Sbjct: 159 AATGAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDV-GDG-----SSTSSAG 212
Query: 65 DAAS 68
S
Sbjct: 213 SGGS 216
>gi|169171347 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1128
Score = 33.9 bits (76), Expect = 0.028
Identities = 22/57 (38%), Positives = 26/57 (45%)
Query: 2 VQEAALAAAVREGGGGGGLEGRAGRRAPLAASGRAAAGAMGARARSLAGHGLLRRNT 58
V+ A AA R GGGGGG +A RR R AR R +A H RN+
Sbjct: 505 VERAQRAAEGRGGGGGGGCGAQAHRRVVGQGQVRWEGVGQAARGRRMAHHCSQGRNS 561
>gi|169172209 PREDICTED: hypothetical protein [Homo sapiens]
Length = 801
Score = 33.9 bits (76), Expect = 0.028
Identities = 22/57 (38%), Positives = 26/57 (45%)
Query: 2 VQEAALAAAVREGGGGGGLEGRAGRRAPLAASGRAAAGAMGARARSLAGHGLLRRNT 58
V+ A AA R GGGGGG +A RR R AR R +A H RN+
Sbjct: 178 VERAQRAAEGRGGGGGGGCGAQAHRRVVGQGQVRWEGVGQAARGRRMAHHCSQGRNS 234
>gi|169170953 PREDICTED: hypothetical protein [Homo sapiens]
Length = 801
Score = 33.9 bits (76), Expect = 0.028
Identities = 22/57 (38%), Positives = 26/57 (45%)
Query: 2 VQEAALAAAVREGGGGGGLEGRAGRRAPLAASGRAAAGAMGARARSLAGHGLLRRNT 58
V+ A AA R GGGGGG +A RR R AR R +A H RN+
Sbjct: 178 VERAQRAAEGRGGGGGGGCGAQAHRRVVGQGQVRWEGVGQAARGRRMAHHCSQGRNS 234
>gi|239508753 PREDICTED: hypothetical protein [Homo sapiens]
Length = 801
Score = 33.9 bits (76), Expect = 0.028
Identities = 22/57 (38%), Positives = 26/57 (45%)
Query: 2 VQEAALAAAVREGGGGGGLEGRAGRRAPLAASGRAAAGAMGARARSLAGHGLLRRNT 58
V+ A AA R GGGGGG +A RR R AR R +A H RN+
Sbjct: 178 VERAQRAAEGRGGGGGGGCGAQAHRRVVGQGQVRWEGVGQAARGRRMAHHCSQGRNS 234
>gi|24497554 homeobox A13 [Homo sapiens]
Length = 388
Score = 33.5 bits (75), Expect = 0.037
Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 5 AALAAAVREGGGGGGL----EGRAGRRAPLAASGRAAAGAMGARARSLAGH 51
AA AAA G GGGG AG +AA+ AAA A + R+L H
Sbjct: 43 AAAAAAAAAGAGGGGFPHPAAAAAGGNFSVAAAAAAAAAAAANQCRNLMAH 93
>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 33.1 bits (74), Expect = 0.049
Identities = 27/66 (40%), Positives = 30/66 (45%), Gaps = 17/66 (25%)
Query: 4 EAALAAAVREGGG--GGGLEG-----------RAGRRA----PLAASGRAAAGAMGARAR 46
EA +A R GG GG L G RAGRR +AA+GR AGA G R
Sbjct: 821 EAGVAGGARGGGAAAGGPLAGAVVQRMRQRRVRAGRRRVGARAVAAAGRQGAGAGGGGRR 880
Query: 47 SLAGHG 52
GHG
Sbjct: 881 VRHGHG 886
>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 33.1 bits (74), Expect = 0.049
Identities = 27/66 (40%), Positives = 30/66 (45%), Gaps = 17/66 (25%)
Query: 4 EAALAAAVREGGG--GGGLEG-----------RAGRRA----PLAASGRAAAGAMGARAR 46
EA +A R GG GG L G RAGRR +AA+GR AGA G R
Sbjct: 821 EAGVAGGARGGGAAAGGPLAGAVVQRMRQRRVRAGRRRVGARAVAAAGRQGAGAGGGGRR 880
Query: 47 SLAGHG 52
GHG
Sbjct: 881 VRHGHG 886
>gi|9966841 cell death regulator aven [Homo sapiens]
Length = 362
Score = 33.1 bits (74), Expect = 0.049
Identities = 23/50 (46%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Query: 6 ALAAAVREGGGGGGLEGRAGRRAPLAASGRAAAGAMGARARSLAGHGLLR 55
A AA R GGGGGG +G GRR GR GA G R A G R
Sbjct: 31 AAAAVARGGGGGGGGDG-GGRRG--RGRGRGFRGARGGRGGGGAPRGSRR 77
>gi|214832074 LIM domain only 2 isoform 1 [Homo sapiens]
Length = 227
Score = 32.3 bits (72), Expect = 0.083
Identities = 15/28 (53%), Positives = 16/28 (57%)
Query: 13 EGGGGGGLEGRAGRRAPLAASGRAAAGA 40
+GGGGGG G RAP A RA GA
Sbjct: 31 DGGGGGGARAPEGVRAPAAGQPRATKGA 58
>gi|61835232 growth differentiation factor 7 preproprotein [Homo
sapiens]
Length = 450
Score = 32.3 bits (72), Expect = 0.083
Identities = 25/53 (47%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 2 VQEAALAAAVRE--GGGGGGLEGRAGRRAPLAASGRAAAGAMGARARSLAGHG 52
V AA A VR GGGGGG GR +A AA+ AAA AR AG G
Sbjct: 28 VLRAAGAGPVRSPGGGGGGGGGGRTLAQAAGAAAVPAAAVPRARAARRAAGSG 80
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 32.3 bits (72), Expect = 0.083
Identities = 21/45 (46%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Query: 14 GGGGGGLEGRAGRRAPLAASGRAAA----GAMGARARSLAGHGLL 54
GGGGG G AG A AA+ AAA G G S AG+G+L
Sbjct: 266 GGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVL 310
Score = 29.3 bits (64), Expect = 0.70
Identities = 16/39 (41%), Positives = 18/39 (46%)
Query: 14 GGGGGGLEGRAGRRAPLAASGRAAAGAMGARARSLAGHG 52
GGGGG G G A +G A A A A + AG G
Sbjct: 257 GGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGG 295
Score = 29.3 bits (64), Expect = 0.70
Identities = 17/40 (42%), Positives = 20/40 (50%)
Query: 2 VQEAALAAAVREGGGGGGLEGRAGRRAPLAASGRAAAGAM 41
V AA AAA GGGGGG G + + +S R G M
Sbjct: 281 VAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGM 320
Score = 28.9 bits (63), Expect = 0.92
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 14 GGGGGGLEGRAGRRAPLAASGRAAAGAMGARARSLA 49
GGGGGG G G A +G A AGA+ A A + A
Sbjct: 256 GGGGGGSGGGGGGGG--AGAGGAGAGAVAAAAAAAA 289
Score = 28.9 bits (63), Expect = 0.92
Identities = 17/39 (43%), Positives = 19/39 (48%)
Query: 14 GGGGGGLEGRAGRRAPLAASGRAAAGAMGARARSLAGHG 52
GGG GG G G A A +G AA A A A + G G
Sbjct: 259 GGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGG 297
Score = 28.9 bits (63), Expect = 0.92
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 5 AALAAAVREGGGGGGLEGRAGRRAPLAASGRAAAGAM----GARARSLA 49
AA AAA GGGGGG G + L++ + G M G A SL+
Sbjct: 285 AAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLS 333
Score = 28.1 bits (61), Expect = 1.6
Identities = 16/36 (44%), Positives = 17/36 (47%)
Query: 14 GGGGGGLEGRAGRRAPLAASGRAAAGAMGARARSLA 49
GGGGGG G G G A AG GA A + A
Sbjct: 249 GGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAA 284
Score = 27.7 bits (60), Expect = 2.0
Identities = 16/38 (42%), Positives = 18/38 (47%)
Query: 12 REGGGGGGLEGRAGRRAPLAASGRAAAGAMGARARSLA 49
R G GGGG G G G AGA GA A ++A
Sbjct: 245 RPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVA 282
>gi|28872761 myotubularin-related protein 1 [Homo sapiens]
Length = 665
Score = 32.3 bits (72), Expect = 0.083
Identities = 21/40 (52%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 1 MVQEAALAAAVREGGGGGGLEGRAGRRAPLAASGRAAAGA 40
M + AA AAA EGGGG G AG R P A+G A AG+
Sbjct: 1 MDRPAAAAAAGCEGGGGPN-PGPAGGRRPPRAAGGATAGS 39
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 32.3 bits (72), Expect = 0.083
Identities = 21/45 (46%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Query: 14 GGGGGGLEGRAGRRAPLAASGRAAA----GAMGARARSLAGHGLL 54
GGGGG G AG A AA+ AAA G G S AG+G+L
Sbjct: 266 GGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVL 310
Score = 29.3 bits (64), Expect = 0.70
Identities = 16/39 (41%), Positives = 18/39 (46%)
Query: 14 GGGGGGLEGRAGRRAPLAASGRAAAGAMGARARSLAGHG 52
GGGGG G G A +G A A A A + AG G
Sbjct: 257 GGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGG 295
Score = 29.3 bits (64), Expect = 0.70
Identities = 17/40 (42%), Positives = 20/40 (50%)
Query: 2 VQEAALAAAVREGGGGGGLEGRAGRRAPLAASGRAAAGAM 41
V AA AAA GGGGGG G + + +S R G M
Sbjct: 281 VAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGM 320
Score = 28.9 bits (63), Expect = 0.92
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 14 GGGGGGLEGRAGRRAPLAASGRAAAGAMGARARSLA 49
GGGGGG G G A +G A AGA+ A A + A
Sbjct: 256 GGGGGGSGGGGGGGG--AGAGGAGAGAVAAAAAAAA 289
Score = 28.9 bits (63), Expect = 0.92
Identities = 17/39 (43%), Positives = 19/39 (48%)
Query: 14 GGGGGGLEGRAGRRAPLAASGRAAAGAMGARARSLAGHG 52
GGG GG G G A A +G AA A A A + G G
Sbjct: 259 GGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGG 297
Score = 28.9 bits (63), Expect = 0.92
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 5 AALAAAVREGGGGGGLEGRAGRRAPLAASGRAAAGAM----GARARSLA 49
AA AAA GGGGGG G + L++ + G M G A SL+
Sbjct: 285 AAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLS 333
Score = 28.1 bits (61), Expect = 1.6
Identities = 16/36 (44%), Positives = 17/36 (47%)
Query: 14 GGGGGGLEGRAGRRAPLAASGRAAAGAMGARARSLA 49
GGGGGG G G G A AG GA A + A
Sbjct: 249 GGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAA 284
Score = 27.7 bits (60), Expect = 2.0
Identities = 16/38 (42%), Positives = 18/38 (47%)
Query: 12 REGGGGGGLEGRAGRRAPLAASGRAAAGAMGARARSLA 49
R G GGGG G G G AGA GA A ++A
Sbjct: 245 RPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVA 282
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 32.3 bits (72), Expect = 0.083
Identities = 21/45 (46%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Query: 14 GGGGGGLEGRAGRRAPLAASGRAAA----GAMGARARSLAGHGLL 54
GGGGG G AG A AA+ AAA G G S AG+G+L
Sbjct: 266 GGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVL 310
Score = 29.3 bits (64), Expect = 0.70
Identities = 16/39 (41%), Positives = 18/39 (46%)
Query: 14 GGGGGGLEGRAGRRAPLAASGRAAAGAMGARARSLAGHG 52
GGGGG G G A +G A A A A + AG G
Sbjct: 257 GGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGG 295
Score = 29.3 bits (64), Expect = 0.70
Identities = 17/40 (42%), Positives = 20/40 (50%)
Query: 2 VQEAALAAAVREGGGGGGLEGRAGRRAPLAASGRAAAGAM 41
V AA AAA GGGGGG G + + +S R G M
Sbjct: 281 VAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGM 320
Score = 28.9 bits (63), Expect = 0.92
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 14 GGGGGGLEGRAGRRAPLAASGRAAAGAMGARARSLA 49
GGGGGG G G A +G A AGA+ A A + A
Sbjct: 256 GGGGGGSGGGGGGGG--AGAGGAGAGAVAAAAAAAA 289
Score = 28.9 bits (63), Expect = 0.92
Identities = 17/39 (43%), Positives = 19/39 (48%)
Query: 14 GGGGGGLEGRAGRRAPLAASGRAAAGAMGARARSLAGHG 52
GGG GG G G A A +G AA A A A + G G
Sbjct: 259 GGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGG 297
Score = 28.9 bits (63), Expect = 0.92
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 5 AALAAAVREGGGGGGLEGRAGRRAPLAASGRAAAGAM----GARARSLA 49
AA AAA GGGGGG G + L++ + G M G A SL+
Sbjct: 285 AAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLS 333
Score = 28.1 bits (61), Expect = 1.6
Identities = 16/36 (44%), Positives = 17/36 (47%)
Query: 14 GGGGGGLEGRAGRRAPLAASGRAAAGAMGARARSLA 49
GGGGGG G G G A AG GA A + A
Sbjct: 249 GGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAA 284
Score = 27.7 bits (60), Expect = 2.0
Identities = 16/38 (42%), Positives = 18/38 (47%)
Query: 12 REGGGGGGLEGRAGRRAPLAASGRAAAGAMGARARSLA 49
R G GGGG G G G AGA GA A ++A
Sbjct: 245 RPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVA 282
>gi|210147522 zinc finger, SWIM-type containing 6 [Homo sapiens]
Length = 1215
Score = 32.0 bits (71), Expect = 0.11
Identities = 17/39 (43%), Positives = 19/39 (48%)
Query: 14 GGGGGGLEGRAGRRAPLAASGRAAAGAMGARARSLAGHG 52
GGGGGG + A S AAA A A A + AG G
Sbjct: 149 GGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAG 187
Score = 26.9 bits (58), Expect = 3.5
Identities = 15/36 (41%), Positives = 18/36 (50%)
Query: 14 GGGGGGLEGRAGRRAPLAASGRAAAGAMGARARSLA 49
GGGG G G G + AA+ AA A A A + A
Sbjct: 143 GGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAA 178
Score = 26.2 bits (56), Expect = 5.9
Identities = 16/39 (41%), Positives = 16/39 (41%)
Query: 14 GGGGGGLEGRAGRRAPLAASGRAAAGAMGARARSLAGHG 52
GGG GG A R P A AAA G A L G
Sbjct: 31 GGGAGGGYSSACRPGPRAGGAAAAAACGGGAALGLLPPG 69
>gi|13775236 scratch [Homo sapiens]
Length = 348
Score = 32.0 bits (71), Expect = 0.11
Identities = 21/55 (38%), Positives = 23/55 (41%), Gaps = 9/55 (16%)
Query: 5 AALAAAVREGGGGGGLEG---------RAGRRAPLAASGRAAAGAMGARARSLAG 50
A+ AA + GGGGG G R G RA RA GA GA R G
Sbjct: 140 ASAAAPDGDAGGGGGAGGRSLGSGPGGRGGTRAGAGTEARAGPGAAGAGGRHACG 194
>gi|9789947 fibroblast growth factor 20 [Homo sapiens]
Length = 211
Score = 31.6 bits (70), Expect = 0.14
Identities = 28/75 (37%), Positives = 34/75 (45%), Gaps = 18/75 (24%)
Query: 7 LAAAVREGGGGGGLEGR------------AGRRAPL-----AASGRAAAGAMGARARSLA 49
+A GG GGLEG AG R PL +A+ R+A G GA A+
Sbjct: 1 MAPLAEVGGFLGGLEGLGQQVGSHFLLPPAGERPPLLGERRSAAERSARGGPGA-AQLAH 59
Query: 50 GHGLLRRNTLTSRAG 64
HG+LRR L R G
Sbjct: 60 LHGILRRRQLYCRTG 74
>gi|221219000 phospholipase C-like 2 isoform 1 [Homo sapiens]
Length = 1127
Score = 31.6 bits (70), Expect = 0.14
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 4 EAALAAAVREGGGGGGL--EGRAGRRAPLAASGRAAAGAMGARARSLAGHG 52
+ AL A V EGGGGGG GRA + ++G + G G AR+ G
Sbjct: 25 KGALKAGVGEGGGGGGRLGHGRARYDSGGVSNGDCSLGVSGDEARASPTRG 75
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 31.2 bits (69), Expect = 0.18
Identities = 17/40 (42%), Positives = 20/40 (50%)
Query: 11 VREGGGGGGLEGRAGRRAPLAASGRAAAGAMGARARSLAG 50
VR GGG GG G+ + A S AAG GA S +G
Sbjct: 927 VRSGGGSGGSGGQVSLKKSKADSCSQAAGTKGAEETSWSG 966
>gi|24586686 voltage-dependent calcium channel gamma-8 subunit [Homo
sapiens]
Length = 425
Score = 31.2 bits (69), Expect = 0.18
Identities = 25/61 (40%), Positives = 25/61 (40%), Gaps = 4/61 (6%)
Query: 5 AALAAAVREGGGGGGLEGRAGRRAPLAASGRAAAGAMGA-RARSLAGHGLLRRNTLTSRA 63
A LA A GGGGGG G G A A G G GA R R A L N A
Sbjct: 320 AGLAGA---GGGGGGAVGAFGGAAGGAGGGGGGGGGAGAERDRGGASGFLTLHNAFPKEA 376
Query: 64 G 64
G
Sbjct: 377 G 377
>gi|21717816 solute carrier family 15, member 4 [Homo sapiens]
Length = 577
Score = 30.8 bits (68), Expect = 0.24
Identities = 24/53 (45%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
Query: 13 EGGGGGGLEGRAGRRAPLAASGR--AAAGAMGARARSLAGHGLLRRNTLTSRA 63
EG GGG AG RAPL + R AAA A GA A A G + L RA
Sbjct: 2 EGSGGG-----AGERAPLLGARRAAAAAAAAGAFAGRRAACGAVLLTELLERA 49
>gi|4506939 sonic hedgehog preproprotein [Homo sapiens]
Length = 462
Score = 30.8 bits (68), Expect = 0.24
Identities = 21/43 (48%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 5 AALAAAVREGGG--GGGLEGRAGRRAPLAASGRAAAGAMGARA 45
AALA A + GG GGG G G R L A G A A GA A
Sbjct: 388 AALAPARTDRGGDSGGGDRGGGGGRVALTAPGAADAPGAGATA 430
>gi|122937319 even-skipped homeobox 2 [Homo sapiens]
Length = 476
Score = 30.8 bits (68), Expect = 0.24
Identities = 19/46 (41%), Positives = 21/46 (45%)
Query: 5 AALAAAVREGGGGGGLEGRAGRRAPLAASGRAAAGAMGARARSLAG 50
AA AA GGGGGG G G A G + G A RS +G
Sbjct: 404 AAAAALGSRGGGGGGGGGGGGGGGGAGAGGGSDFGCSAAAPRSESG 449
>gi|239758008 PREDICTED: hypothetical protein XP_002346266 [Homo
sapiens]
Length = 316
Score = 30.0 bits (66), Expect = 0.41
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 4 EAALAAAVREGGGGGGLEGRAGRRAPLAASGR 35
+ A AA + GG GG + R G+RAP + GR
Sbjct: 284 QKAAAARAKSGGFGGKKQRRRGQRAPKSRGGR 315
>gi|239755981 PREDICTED: hypothetical protein XP_002344766 [Homo
sapiens]
Length = 307
Score = 30.0 bits (66), Expect = 0.41
Identities = 15/32 (46%), Positives = 17/32 (53%)
Query: 12 REGGGGGGLEGRAGRRAPLAASGRAAAGAMGA 43
R+ GGG G GR GR A G AAA + A
Sbjct: 254 RQRGGGRGGGGRGGREAAATVHGNAAASSSAA 285
Score = 25.8 bits (55), Expect = 7.7
Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 12 REGGGGGGLEGRAGRRAPLAASGRAAAGAMGARARSLAGHG 52
R GGG GG E A AAS AAA A A ++ G G
Sbjct: 260 RGGGGRGGREAAATVHGNAAASSSAAARG-AAAATTIDGGG 299
>gi|239754489 PREDICTED: hypothetical protein [Homo sapiens]
Length = 228
Score = 30.0 bits (66), Expect = 0.41
Identities = 24/60 (40%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 8 AAAVREGGGGGGLEGR---AGRRAPLAASGRAAAGAMGARARSLAGHGLLRRNTLTSRAG 64
A A+ GGGGGG + AGRRA AA A R+ A GL RR R G
Sbjct: 77 APAIAPGGGGGGCGAQHWAAGRRAQREQGAGAAVLADFGHVRA-APSGLRRRRLQRRRGG 135
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.129 0.352
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,202,408
Number of Sequences: 37866
Number of extensions: 86365
Number of successful extensions: 2322
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 86
Number of HSP's that attempted gapping in prelim test: 1739
Number of HSP's gapped (non-prelim): 505
length of query: 68
length of database: 18,247,518
effective HSP length: 41
effective length of query: 27
effective length of database: 16,695,012
effective search space: 450765324
effective search space used: 450765324
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.