CACNA1A 10103

Name: CACNA1A	Sequence: fasta or formatted (2506aa)		NCBI GI: 187828892
Description: calcium channel, alpha 1A subunit isoform 4		Referenced in: Calcium and TRP Cation Channels
Other entries for this name: alt prot [2261aa] calcium channel, alpha 1A subunit isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.6 190 3 C cysteine 1.1 28 1 D aspartate 4.7 119 3 E glutamate 6.4 160 4 F phenylalanine 5.0 125 3 G glycine 7.7 193 4 H histidine 2.7 68 10 I isoleucine 4.5 114 3 K lysine 4.4 110 2 L leucine 8.3 208 3 M methionine 3.4 85 2 N asparagine 4.2 105 3 P proline 6.9 172 4 Q glutamine 4.3 108 13 R arginine 8.0 201 4 S serine 6.5 164 3 T threonine 4.7 119 2 V valine 5.1 129 3 W tryptophan 1.3 32 1 Y tyrosine 3.0 76 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 calcium channel, alpha 1A subunit isoform 4 CACNA1A 0.891 calcium channel, alpha 1A subunit isoform 3 CACNA1B 0.537 calcium channel, voltage-dependent, N type, alpha 1B ... CACNA1E 0.468 calcium channel, voltage-dependent, R type, alpha 1E... CACNA1D 0.147 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.146 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.146 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.146 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.146 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.146 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.146 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.146 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.146 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.146 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.146 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.146 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.146 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.145 calcium channel, voltage-dependent, L type, alpha 1... CACNA1D 0.145 calcium channel, voltage-dependent, L type, alpha 1... CACNA1D 0.145 calcium channel, voltage-dependent, L type, alpha 1D ... CACNA1C 0.145 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.145 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.144 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.144 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.144 calcium channel, voltage-dependent, L type, alpha 1... CACNA1F 0.144 calcium channel, voltage-dependent, L type, alpha 1F... CACNA1C 0.143 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.143 calcium channel, voltage-dependent, L type, alpha 1... CACNA1S 0.138 calcium channel, voltage-dependent, L type, alpha 1... SCN2A 0.059 sodium channel, voltage-gated, type II, alpha isofor... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.