Guide to the Human Genome
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Name: IQCC Sequence: fasta or formatted (466aa) NCBI GI: 229892326
Description:

IQ motif containing C isoform 2

Referenced in:

Additional Interaction Domain Families

Other entries for this name:
alt prot [546aa] IQ motif containing C isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         22           1
 C cysteine            2.4         11           1
 D aspartate           4.7         22           2
 E glutamate           9.9         46           2
 F phenylalanine       1.3          6           1
 G glycine             6.9         32           2
 H histidine           3.0         14           1
 I isoleucine          2.6         12           2
 K lysine              6.2         29           2
 L leucine             9.0         42           3
 M methionine          1.5          7           1
 N asparagine          2.4         11           1
 P proline             7.9         37           2
 Q glutamine           7.3         34           2
 R arginine            9.0         42           2
 S serine              9.0         42           2
 T threonine           6.0         28           2
 V valine              2.6         12           1
 W tryptophan          2.4         11           1
 Y tyrosine            1.3          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   IQ motif containing C isoform 2 
IQCC                  0.976   IQ motif containing C isoform 1 
LOC100133220          0.017   PREDICTED: hypothetical protein 
LOC647042             0.015   PREDICTED: hypothetical protein isoform 1 
LOC283685             0.013   PREDICTED: golgi autoantigen, golgin subfamily a-li...
TNIK                  0.013   TRAF2 and NCK interacting kinase isoform 8 
TNIK                  0.013   TRAF2 and NCK interacting kinase isoform 7 
ENAH                  0.011   enabled homolog isoform a 
ENAH                  0.011   enabled homolog isoform b 
TNIK                  0.011   TRAF2 and NCK interacting kinase isoform 4 
TNIK                  0.011   TRAF2 and NCK interacting kinase isoform 3 
TNRC18                0.011   trinucleotide repeat containing 18 
LOC283685             0.011   PREDICTED: golgi autoantigen, golgin subfamily a-li...
TCHH                  0.011   trichohyalin 
IVL                   0.010   involucrin 
KIAA1704              0.010   hypothetical protein LOC55425 
HYDIN                 0.010   hydrocephalus inducing isoform a 
LOC100170229          0.008   hypothetical protein LOC100170229 
LOC651807             0.008   PREDICTED: hypothetical protein 
ATXN7L1               0.008   ataxin 7-like 1 isoform 1 
ATXN7L1               0.008   ataxin 7-like 1 isoform 3 
MAST4                 0.008   microtubule associated serine/threonine kinase fami...
UPF3B                 0.008   UPF3 regulator of nonsense transcripts homolog B iso...
FAM186A               0.008   family with sequence similarity 186, member A [Homo...
MYH7                  0.008   myosin, heavy chain 7, cardiac muscle, beta 
BTBD12                0.008   BTB (POZ) domain containing 12 
PNN                   0.008   pinin, desmosome associated protein 
ZNF853                0.007   zinc finger protein 853 
AFF4                  0.007   ALL1 fused gene from 5q31 
TTN                   0.007   titin isoform N2-A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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