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Search of human proteins with 226342990
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|226342990 SLAM family member 9 isoform 1 [Homo sapiens]
(289 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|226342990 SLAM family member 9 isoform 1 [Homo sapiens] 595 e-170
gi|226342992 SLAM family member 9 isoform 2 [Homo sapiens] 270 8e-73
gi|226342994 SLAM family member 9 isoform 3 [Homo sapiens] 181 7e-46
gi|4502687 CD84 molecule [Homo sapiens] 141 8e-34
gi|55925578 lymphocyte antigen 9 isoform a [Homo sapiens] 131 6e-31
gi|19923572 SLAM family member 7 [Homo sapiens] 122 3e-28
gi|16418407 activating NK receptor precursor [Homo sapiens] 106 3e-23
gi|75991709 lymphocyte antigen 9 isoform b [Homo sapiens] 71 1e-12
gi|4506969 signaling lymphocytic activation molecule family memb... 60 2e-09
gi|37700249 HEPACAM family member 2 isoform 2 [Homo sapiens] 54 2e-07
gi|86439957 HEPACAM family member 2 isoform 1 [Homo sapiens] 54 2e-07
gi|121674801 hepatocyte cell adhesion molecule [Homo sapiens] 51 1e-06
gi|52317156 carcinoembryonic antigen-related cell adhesion molec... 51 1e-06
gi|148612793 carcinoembryonic antigen-related cell adhesion mole... 51 1e-06
gi|7706529 CD244 natural killer cell receptor 2B4 [Homo sapiens] 50 2e-06
gi|9910342 SLAM family member 8 [Homo sapiens] 45 7e-05
gi|98986445 carcinoembryonic antigen-related cell adhesion molec... 40 0.002
gi|21361571 CD48 molecule [Homo sapiens] 37 0.015
gi|146229333 hypothetical protein LOC284021 [Homo sapiens] 36 0.034
gi|110431348 deleted in colorectal carcinoma [Homo sapiens] 34 0.17
gi|38683840 CD96 antigen isoform 1 precursor [Homo sapiens] 33 0.29
gi|94538343 sialic acid binding Ig-like lectin 8 [Homo sapiens] 33 0.29
gi|66346706 neuronal growth regulator 1 [Homo sapiens] 33 0.29
gi|226958551 Fc receptor-like 1 isoform 3 precursor [Homo sapiens] 33 0.38
gi|226958547 Fc receptor-like 1 isoform 2 precursor [Homo sapiens] 33 0.38
gi|16418419 Fc receptor-like 1 isoform 1 precursor [Homo sapiens] 33 0.38
gi|153945765 mitogen-activated protein kinase kinase kinase 1 [H... 33 0.38
gi|91208433 CD86 antigen isoform 2 precursor [Homo sapiens] 33 0.38
gi|91208430 CD86 antigen isoform 1 [Homo sapiens] 33 0.38
gi|68161541 carcinoembryonic antigen-related cell adhesion molec... 32 0.65
>gi|226342990 SLAM family member 9 isoform 1 [Homo sapiens]
Length = 289
Score = 595 bits (1535), Expect = e-170
Identities = 289/289 (100%), Positives = 289/289 (100%)
Query: 1 MCAFPWLLLLLLLQEGSQRRLWRWCGSEEVVAVLQESISLPLEIPPDEEVENIIWSSHKS 60
MCAFPWLLLLLLLQEGSQRRLWRWCGSEEVVAVLQESISLPLEIPPDEEVENIIWSSHKS
Sbjct: 1 MCAFPWLLLLLLLQEGSQRRLWRWCGSEEVVAVLQESISLPLEIPPDEEVENIIWSSHKS 60
Query: 61 LATVVPGKEGHPATIMVTNPHYQGQVSFLDPSYSLHISNLSWEDSGLYQAQVNLRTSQIS 120
LATVVPGKEGHPATIMVTNPHYQGQVSFLDPSYSLHISNLSWEDSGLYQAQVNLRTSQIS
Sbjct: 61 LATVVPGKEGHPATIMVTNPHYQGQVSFLDPSYSLHISNLSWEDSGLYQAQVNLRTSQIS 120
Query: 121 TMQQYNICVYRWLSEPQITVNFESSGEGACSMSLVCSVEKAGMDMTYSWLSRGDSTYTFH 180
TMQQYNICVYRWLSEPQITVNFESSGEGACSMSLVCSVEKAGMDMTYSWLSRGDSTYTFH
Sbjct: 121 TMQQYNICVYRWLSEPQITVNFESSGEGACSMSLVCSVEKAGMDMTYSWLSRGDSTYTFH 180
Query: 181 EGPVLSTSWRPGDSALSYTCRANNPISNVSSCPIPDGPFYADPNYASEKPSTAFCLLAKG 240
EGPVLSTSWRPGDSALSYTCRANNPISNVSSCPIPDGPFYADPNYASEKPSTAFCLLAKG
Sbjct: 181 EGPVLSTSWRPGDSALSYTCRANNPISNVSSCPIPDGPFYADPNYASEKPSTAFCLLAKG 240
Query: 241 LLIFLLLVILAMGLWVIRVQKRHKMPRMKKLMRNRMKLRKEAKPGSSPA 289
LLIFLLLVILAMGLWVIRVQKRHKMPRMKKLMRNRMKLRKEAKPGSSPA
Sbjct: 241 LLIFLLLVILAMGLWVIRVQKRHKMPRMKKLMRNRMKLRKEAKPGSSPA 289
>gi|226342992 SLAM family member 9 isoform 2 [Homo sapiens]
Length = 198
Score = 270 bits (691), Expect = 8e-73
Identities = 130/130 (100%), Positives = 130/130 (100%)
Query: 1 MCAFPWLLLLLLLQEGSQRRLWRWCGSEEVVAVLQESISLPLEIPPDEEVENIIWSSHKS 60
MCAFPWLLLLLLLQEGSQRRLWRWCGSEEVVAVLQESISLPLEIPPDEEVENIIWSSHKS
Sbjct: 1 MCAFPWLLLLLLLQEGSQRRLWRWCGSEEVVAVLQESISLPLEIPPDEEVENIIWSSHKS 60
Query: 61 LATVVPGKEGHPATIMVTNPHYQGQVSFLDPSYSLHISNLSWEDSGLYQAQVNLRTSQIS 120
LATVVPGKEGHPATIMVTNPHYQGQVSFLDPSYSLHISNLSWEDSGLYQAQVNLRTSQIS
Sbjct: 61 LATVVPGKEGHPATIMVTNPHYQGQVSFLDPSYSLHISNLSWEDSGLYQAQVNLRTSQIS 120
Query: 121 TMQQYNICVY 130
TMQQYNICVY
Sbjct: 121 TMQQYNICVY 130
Score = 139 bits (351), Expect = 2e-33
Identities = 80/116 (68%), Positives = 88/116 (75%), Gaps = 7/116 (6%)
Query: 174 DSTYTFHEGPVLSTSWRPGDSALSYTCRANNPISNVSSCPIPDGPFYADPNYASEKPSTA 233
D +Y+ H + + SW DS L Y + N S +S+ + Y PNYASEKPSTA
Sbjct: 90 DPSYSLH---ISNLSWE--DSGL-YQAQVNLRTSQISTMQQYNICVY-HPNYASEKPSTA 142
Query: 234 FCLLAKGLLIFLLLVILAMGLWVIRVQKRHKMPRMKKLMRNRMKLRKEAKPGSSPA 289
FCLLAKGLLIFLLLVILAMGLWVIRVQKRHKMPRMKKLMRNRMKLRKEAKPGSSPA
Sbjct: 143 FCLLAKGLLIFLLLVILAMGLWVIRVQKRHKMPRMKKLMRNRMKLRKEAKPGSSPA 198
>gi|226342994 SLAM family member 9 isoform 3 [Homo sapiens]
Length = 111
Score = 181 bits (459), Expect = 7e-46
Identities = 85/86 (98%), Positives = 86/86 (100%)
Query: 1 MCAFPWLLLLLLLQEGSQRRLWRWCGSEEVVAVLQESISLPLEIPPDEEVENIIWSSHKS 60
MCAFPWLLLLLLLQEGSQRRLWRWCGSEEVVAVLQESISLPLEIPPDEEVENIIWSSHKS
Sbjct: 1 MCAFPWLLLLLLLQEGSQRRLWRWCGSEEVVAVLQESISLPLEIPPDEEVENIIWSSHKS 60
Query: 61 LATVVPGKEGHPATIMVTNPHYQGQV 86
LATVVPGKEGHPATIMVTNPHYQGQ+
Sbjct: 61 LATVVPGKEGHPATIMVTNPHYQGQI 86
>gi|4502687 CD84 molecule [Homo sapiens]
Length = 328
Score = 141 bits (355), Expect = 8e-34
Identities = 91/287 (31%), Positives = 146/287 (50%), Gaps = 22/287 (7%)
Query: 6 WLLLLLLLQEGSQRRLWRWCGSEE-----VVAVLQESISLPLEIPPDEEVENIIWSSHKS 60
W+LLL L + W ++ V +L ES++ P+ I +V+ I W+S S
Sbjct: 7 WILLLCL-------QTWPEAAGKDSEIFTVNGILGESVTFPVNIQEPRQVKIIAWTSKTS 59
Query: 61 LATVVPGKEGHPATIMVTNPHYQGQVSFLDPSYSLHISNLSWEDSGLYQAQVNLRTSQIS 120
+A V PG + VT+ +Y ++ L P+Y+L IS+L ED+G Y+A +N + +
Sbjct: 60 VAYVTPGDSETAPVVTVTHRNYYERIHALGPNYNLVISDLRMEDAGDYKADINTQADPYT 119
Query: 121 TMQQYNICVYRWLSEPQITVNFESSGEGACSMSLVCSVEKAGMDMTYSWLSRGDSTYTFH 180
T ++YN+ +YR L +P+IT + +S C+++L CSVEK ++TY+W G+
Sbjct: 120 TTKRYNLQIYRRLGKPKITQSLMASVNSTCNVTLTCSVEKEEKNVTYNWSPLGE------ 173
Query: 181 EGPVLSTSWRPGDSALSYTCRANNPISNVSSCPIPDGPFYADPNYASEKPSTAFCLLAKG 240
EG VL P D L+YTC A NP+SN +S I AD T L
Sbjct: 174 EGNVLQIFQTPEDQELTYTCTAQNPVSN-NSDSISARQLCADIAMGFRTHHTG---LLSV 229
Query: 241 LLIFLLLVILAMGLWVIRVQKRHKMPRMKKLMRNRMKLRKEAKPGSS 287
L +F LLV++ +++ R+ KR + KK + + + +P S
Sbjct: 230 LAMFFLLVLILSSVFLFRLFKRRQDAASKKTIYTYIMASRNTQPAES 276
>gi|55925578 lymphocyte antigen 9 isoform a [Homo sapiens]
Length = 655
Score = 131 bits (330), Expect = 6e-31
Identities = 75/195 (38%), Positives = 109/195 (55%), Gaps = 5/195 (2%)
Query: 30 VVAVLQESISLPLEIPPDEEVENIIWSSHKSLATVVPGKEGHPATIMVTNPHYQGQVSFL 89
V +L S++LPL I D E+EN+IW K+ KE TIMV + Y G++
Sbjct: 55 VSGILGGSVTLPLNISVDTEIENVIWIGPKNALAFARPKEN--VTIMVKS--YLGRLDIT 110
Query: 90 DPSYSLHISNLSWEDSGLYQAQVNLRTSQISTMQQYNICVYRWLSEPQITVNFESSGEG- 148
SYSL ISNL+ D+G Y+AQ+N R +++T +++ + VY L EPQ+T+ E
Sbjct: 111 KWSYSLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVYEQLQEPQVTMKSVKVSENF 170
Query: 149 ACSMSLVCSVEKAGMDMTYSWLSRGDSTYTFHEGPVLSTSWRPGDSALSYTCRANNPISN 208
+C+++L+CSV+ A + YSW R + G +L+ S P D L Y C A NP+S
Sbjct: 171 SCNITLMCSVKGAEKSVLYSWTPREPHASESNGGSILTVSRTPCDPDLPYICTAQNPVSQ 230
Query: 209 VSSCPIPDGPFYADP 223
SS P+ G F DP
Sbjct: 231 RSSLPVHVGQFCTDP 245
Score = 103 bits (256), Expect = 2e-22
Identities = 57/183 (31%), Positives = 91/183 (49%)
Query: 28 EEVVAVLQESISLPLEIPPDEEVENIIWSSHKSLATVVPGKEGHPATIMVTNPHYQGQVS 87
E VV VL E ++LPL +P + E ++W + S+ + + ++ + Y+ +V
Sbjct: 255 ETVVGVLGEPVTLPLALPACRDTEKVVWLFNTSIISKEREEAATADPLIKSRDPYKNRVW 314
Query: 88 FLDPSYSLHISNLSWEDSGLYQAQVNLRTSQISTMQQYNICVYRWLSEPQITVNFESSGE 147
SL IS L ED+G Y A V S +++M + +YR L +P+IT + S +
Sbjct: 315 VSSQDCSLKISQLKIEDAGPYHAYVCSEASSVTSMTHVTLLIYRRLRKPKITWSLRHSED 374
Query: 148 GACSMSLVCSVEKAGMDMTYSWLSRGDSTYTFHEGPVLSTSWRPGDSALSYTCRANNPIS 207
G C +SL CSVE G + Y+W L+ SWR ++ + TC A+NP+S
Sbjct: 375 GICRISLTCSVEDGGNTVMYTWTPLQKEAVVSQGESHLNVSWRSSENHPNLTCTASNPVS 434
Query: 208 NVS 210
S
Sbjct: 435 RSS 437
>gi|19923572 SLAM family member 7 [Homo sapiens]
Length = 335
Score = 122 bits (307), Expect = 3e-28
Identities = 80/258 (31%), Positives = 138/258 (53%), Gaps = 16/258 (6%)
Query: 21 LWRWCGS------EEVVAVLQESISLPLEIPPDEEVENIIWSSHKS-LATVVPGKEGHPA 73
LW+ GS +E+V + +++ PL+ ++V++I+W+ + + L T+ P EG
Sbjct: 14 LWQLTGSAASGPVKELVGSVGGAVTFPLKSKV-KQVDSIVWTFNTTPLVTIQP--EG--G 68
Query: 74 TIMVTNPHYQGQVSFLDPSYSLHISNLSWEDSGLYQAQVNLRTSQISTMQQYNICVYRWL 133
TI+VT + +V F D YSL +S L DSG+Y + + Q + Q+Y + VY L
Sbjct: 69 TIIVTQNRNRERVDFPDGGYSLKLSKLKKNDSGIYYVGIYSSSLQQPSTQEYVLHVYEHL 128
Query: 134 SEPQITVNFESSGEGACSMSLVCSVEKAGMDMTYSWLSRGDSTYTFHEGPVLSTSWRPGD 193
S+P++T+ +S+ G C +L C +E D+ Y+W + G + H G +L SWR G+
Sbjct: 129 SKPKVTMGLQSNKNGTCVTNLTCCMEHGEEDVIYTWKALGQAANESHNGSILPISWRWGE 188
Query: 194 SALSYTCRANNPISNVSSCPIPDGPFYADPNYASEKPSTAFCLLAKGLLIFLL-LVILAM 252
S +++ C A NP+S S PI A++ P ++ LL L+ LL L +L +
Sbjct: 189 SDMTFICVARNPVSRNFSSPILARKLCEG---AADDPDSSMVLLCLLLVPLLLSLFVLGL 245
Query: 253 GLWVIRVQKRHKMPRMKK 270
LW ++ +++ + KK
Sbjct: 246 FLWFLKRERQEEYIEEKK 263
>gi|16418407 activating NK receptor precursor [Homo sapiens]
Length = 331
Score = 106 bits (264), Expect = 3e-23
Identities = 69/183 (37%), Positives = 102/183 (55%), Gaps = 9/183 (4%)
Query: 30 VVAVLQESISLPLEIPPDEEVENIIW-SSHKSLATVVPGKEGHPATIMVTNPHYQGQVSF 88
V +L ES++LPLE P E+V I W + SLA +VP + P I VTNP +++F
Sbjct: 30 VNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSP-EIHVTNPKQGKRLNF 88
Query: 89 LDPSYSLHISNLSWEDSGLYQAQVNLRTSQISTMQQYNICVYRWLSEPQITVNFESSGEG 148
SYSL +SNL ED+G Y+AQ++ +TS + + Y + + R L Q+T + +
Sbjct: 89 TQ-SYSLQLSNLKMEDTGSYRAQISTKTS--AKLSSYTLRILRQLRNIQVTNHSQLFQNM 145
Query: 149 ACSMSLVCSVEKAGMDMTYSWLSRGDSTYTFHEGPVLSTSWRPG-DSALSYTCRANNPIS 207
C + L CSVE A ++++ W + G+ T P L+ SW P S YTC A N +S
Sbjct: 146 TCELHLTCSVEDADDNVSFRWEALGN---TLSSQPNLTVSWDPRISSEQDYTCIAENAVS 202
Query: 208 NVS 210
N+S
Sbjct: 203 NLS 205
>gi|75991709 lymphocyte antigen 9 isoform b [Homo sapiens]
Length = 193
Score = 71.2 bits (173), Expect = 1e-12
Identities = 40/101 (39%), Positives = 60/101 (59%), Gaps = 4/101 (3%)
Query: 30 VVAVLQESISLPLEIPPDEEVENIIWSSHKSLATVVPGKEGHPATIMVTNPHYQGQVSFL 89
V +L S++LPL I D E+EN+IW K+ KE TIMV + Y G++
Sbjct: 55 VSGILGGSVTLPLNISVDTEIENVIWIGPKNALAFARPKEN--VTIMVKS--YLGRLDIT 110
Query: 90 DPSYSLHISNLSWEDSGLYQAQVNLRTSQISTMQQYNICVY 130
SYSL ISNL+ D+G Y+AQ+N R +++T +++ + VY
Sbjct: 111 KWSYSLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVY 151
>gi|4506969 signaling lymphocytic activation molecule family member
1 [Homo sapiens]
Length = 335
Score = 60.5 bits (145), Expect = 2e-09
Identities = 60/240 (25%), Positives = 104/240 (43%), Gaps = 25/240 (10%)
Query: 20 RLWRWCGSEEVVAVLQESISLPLEIPPDEEVENIIWSSHKSLATVVPGKEGHPATIMVTN 79
++ R GS+ ++ + E I+ + + +I+ + KSL V K I+ +
Sbjct: 34 KILRQLGSKVLLPLTYERINKSMN-----KSIHIVVTMAKSLENSVENK------IVSLD 82
Query: 80 PHYQGQVSFLDPSYSLHISNLSW-------EDSGLYQAQVNLRTSQISTMQQYNICVYRW 132
P G +L Y ++ NL+ ED G Y + S Q + Y
Sbjct: 83 PSEAGPPRYLGDRYKFYLENLTLGIRESRKEDEGWYLMTLEKNVSVQRFCLQLRL--YEQ 140
Query: 133 LSEPQITVNFESSGEGACSMSLVCSVEKAGMDMTYSWLSRGDS--TYTFHEGPVLSTSWR 190
+S P+I V ++ G C++ L C+VEK G + YSW + + + +LS +
Sbjct: 141 VSTPEIKVLNKTQENGTCTLILGCTVEK-GDHVAYSWSEKAGTHPLNPANSSHLLSLTLG 199
Query: 191 PGDSALSYTCRANNPISNVSSCPIPDGPFYADPNYASEKPSTAFCLLAKGLLIFLLLVIL 250
P + Y C +NPISN S P DP + KP + L G+++ L++V++
Sbjct: 200 PQHADNIYICTVSNPISNNSQTFSPWPGCRTDP--SETKPWAVYAGLLGGVIMILIMVVI 257
>gi|37700249 HEPACAM family member 2 isoform 2 [Homo sapiens]
Length = 450
Score = 53.5 bits (127), Expect = 2e-07
Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 9/144 (6%)
Query: 76 MVTNPHYQGQVSFLDPSYSLHISNLSWEDSGLYQAQVNLR-TSQISTMQQYNICVYRWLS 134
+V + YQ + + + P+ SL I+ L + D G Y +VN++ +S Q+ + V ++
Sbjct: 76 VVPDLEYQHKFTMMPPNASLLINPLQFPDEGNYIVKVNIQGNGTLSASQKIQVTVDDPVT 135
Query: 135 EPQITVNFESSG-EGACSMSLVCSVEKAGMDMTYSWLSRG-----DSTYTFH-EGPVLST 187
+P + ++ S E +M+L C VE G + Y WL G STY+F + L
Sbjct: 136 KPVVQIHPPSGAVEYVGNMTLTCHVE-GGTRLAYQWLKNGRPVHTSSTYSFSPQNNTLHI 194
Query: 188 SWRPGDSALSYTCRANNPISNVSS 211
+ + +Y+C NP+S + S
Sbjct: 195 APVTKEDIGNYSCLVRNPVSEMES 218
Score = 34.3 bits (77), Expect = 0.13
Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 8/134 (5%)
Query: 81 HYQGQVSFLDPSYSLHISNLSWEDSGLYQAQVNLRTSQISTMQQYNICVY-----RWLSE 135
H SF + +LHI+ ++ ED G Y V S++ + I Y + S+
Sbjct: 178 HTSSTYSFSPQNNTLHIAPVTKEDIGNYSCLVRNPVSEMESDIIMPIIYYGPYGLQVNSD 237
Query: 136 PQITVNFESSGEGACSMSLVCSVEKAGMDMTYSWLSRGD-STYTFHEGPVLS-TSWRPGD 193
+ V + + ++ CS + + TYSW+ R D +TY GP L S +
Sbjct: 238 KGLKVGEVFTVDLGEAILFDCSADSHPPN-TYSWIRRTDNTTYIIKHGPRLEVASEKVAQ 296
Query: 194 SALSYTCRANNPIS 207
+ Y C A N I+
Sbjct: 297 KTMDYVCCAYNNIT 310
>gi|86439957 HEPACAM family member 2 isoform 1 [Homo sapiens]
Length = 462
Score = 53.5 bits (127), Expect = 2e-07
Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 9/144 (6%)
Query: 76 MVTNPHYQGQVSFLDPSYSLHISNLSWEDSGLYQAQVNLR-TSQISTMQQYNICVYRWLS 134
+V + YQ + + + P+ SL I+ L + D G Y +VN++ +S Q+ + V ++
Sbjct: 88 VVPDLEYQHKFTMMPPNASLLINPLQFPDEGNYIVKVNIQGNGTLSASQKIQVTVDDPVT 147
Query: 135 EPQITVNFESSG-EGACSMSLVCSVEKAGMDMTYSWLSRG-----DSTYTFH-EGPVLST 187
+P + ++ S E +M+L C VE G + Y WL G STY+F + L
Sbjct: 148 KPVVQIHPPSGAVEYVGNMTLTCHVE-GGTRLAYQWLKNGRPVHTSSTYSFSPQNNTLHI 206
Query: 188 SWRPGDSALSYTCRANNPISNVSS 211
+ + +Y+C NP+S + S
Sbjct: 207 APVTKEDIGNYSCLVRNPVSEMES 230
Score = 34.3 bits (77), Expect = 0.13
Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 8/134 (5%)
Query: 81 HYQGQVSFLDPSYSLHISNLSWEDSGLYQAQVNLRTSQISTMQQYNICVY-----RWLSE 135
H SF + +LHI+ ++ ED G Y V S++ + I Y + S+
Sbjct: 190 HTSSTYSFSPQNNTLHIAPVTKEDIGNYSCLVRNPVSEMESDIIMPIIYYGPYGLQVNSD 249
Query: 136 PQITVNFESSGEGACSMSLVCSVEKAGMDMTYSWLSRGD-STYTFHEGPVLS-TSWRPGD 193
+ V + + ++ CS + + TYSW+ R D +TY GP L S +
Sbjct: 250 KGLKVGEVFTVDLGEAILFDCSADSHPPN-TYSWIRRTDNTTYIIKHGPRLEVASEKVAQ 308
Query: 194 SALSYTCRANNPIS 207
+ Y C A N I+
Sbjct: 309 KTMDYVCCAYNNIT 322
>gi|121674801 hepatocyte cell adhesion molecule [Homo sapiens]
Length = 416
Score = 51.2 bits (121), Expect = 1e-06
Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 22/213 (10%)
Query: 80 PHYQGQVSFLDPSYSLHISNLSWEDSGLYQAQVNLRTSQISTMQQYNICVYRWLSEPQIT 139
P Y+ ++ + SL +S+L D G Y+ ++++ + + N+ V +S PQ+
Sbjct: 93 PDYRDRIRLFENG-SLLLSDLQLADEGTYEVEISITDDTFTGEKTINLTVDVPISRPQVL 151
Query: 140 VNFESSGEGACSMSLVCSVEKAGMDMTYSWLSRG-----DSTYTFHEGPVLSTSWR--PG 192
V + E + + +L CS E G +Y+WL G DS + T R
Sbjct: 152 VASTTVLELSEAFTLNCSHEN-GTKPSYTWLKDGKPLLNDSRMLLSPDQKVLTITRVLME 210
Query: 193 DSALSYTCRANNPISNVSSCPIPDGPFYADPNYASEKPSTAFCLLAKGLLIFLLLVILAM 252
D L Y+C NPIS S P+ + S+ + +L+ G + L+ ++
Sbjct: 211 DDDL-YSCMVENPISQGRSLPV---------KITVYRRSSLYIILSTGGIFLLVTLVTVC 260
Query: 253 GLWVIRVQKRHKMPRMKKLM---RNRMKLRKEA 282
W +K+ K+ + L +N +L+ EA
Sbjct: 261 ACWKPSKRKQKKLEKQNSLEYMDQNDDRLKPEA 293
>gi|52317156 carcinoembryonic antigen-related cell adhesion molecule
isoform 2 [Homo sapiens]
Length = 292
Score = 50.8 bits (120), Expect = 1e-06
Identities = 38/146 (26%), Positives = 63/146 (43%), Gaps = 11/146 (7%)
Query: 75 IMVTNPHYQGQVSFLDPSYSLHISNLSWEDSGLYQAQVNLRTSQISTMQQYNICVYRWLS 134
+ P Y G+ + + PS LH N++ ED+G Y QV R SQI +++ VY ++
Sbjct: 88 VRTPGPAYSGRET-ISPSGDLHFQNVTLEDTGYYNLQVTYRNSQIE-QASHHLRVYESVA 145
Query: 135 EPQITVNFESSGEGACSMSLVCSVEKAGMDMTYSWLSRGDSTYTFHE------GPVLSTS 188
+P I + + E S+ L C G ++ W+ VL+
Sbjct: 146 QPSIQASSTTVTEKG-SVVLTCHTNNTG--TSFQWIFNNQRLQVTKRMKLSWFNHVLTID 202
Query: 189 WRPGDSALSYTCRANNPISNVSSCPI 214
+ A Y C +NP+S+ S P+
Sbjct: 203 PIRQEDAGEYQCEVSNPVSSNRSDPL 228
>gi|148612793 carcinoembryonic antigen-related cell adhesion
molecule isoform 1 [Homo sapiens]
Length = 293
Score = 50.8 bits (120), Expect = 1e-06
Identities = 38/146 (26%), Positives = 63/146 (43%), Gaps = 11/146 (7%)
Query: 75 IMVTNPHYQGQVSFLDPSYSLHISNLSWEDSGLYQAQVNLRTSQISTMQQYNICVYRWLS 134
+ P Y G+ + + PS LH N++ ED+G Y QV R SQI +++ VY ++
Sbjct: 88 VRTPGPAYSGRET-ISPSGDLHFQNVTLEDTGYYNLQVTYRNSQIE-QASHHLRVYESVA 145
Query: 135 EPQITVNFESSGEGACSMSLVCSVEKAGMDMTYSWLSRGDSTYTFHE------GPVLSTS 188
+P I + + E S+ L C G ++ W+ VL+
Sbjct: 146 QPSIQASSTTVTEKG-SVVLTCHTNNTG--TSFQWIFNNQRLQVTKRMKLSWFNHVLTID 202
Query: 189 WRPGDSALSYTCRANNPISNVSSCPI 214
+ A Y C +NP+S+ S P+
Sbjct: 203 PIRQEDAGEYQCEVSNPVSSNRSDPL 228
>gi|7706529 CD244 natural killer cell receptor 2B4 [Homo sapiens]
Length = 365
Score = 50.4 bits (119), Expect = 2e-06
Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 39/216 (18%)
Query: 7 LLLLLLLQEGSQRRLWRWCGSEEVVAVLQESISLPLEIPPDE---EVENIIWSSHKSLAT 63
LLLLL + +G + GS + V + +PL++ P+ +V++I W
Sbjct: 10 LLLLLKVYQGKGCQ-----GSADHVVSIS---GVPLQLQPNSIQTKVDSIAWKK------ 55
Query: 64 VVPGKEGHPATIMVTNPHYQGQVS-----FLDPSYSLHISNLSWEDSGLYQAQVNLRTSQ 118
++P + G + N S F+ + SL I +DSGLY +V + +
Sbjct: 56 LLPSQNGFHHILKWENGSLPSNTSNDRFSFIVKNLSLLIKAAQQQDSGLYCLEVTSISGK 115
Query: 119 ISTMQQYNICVYRWLSEPQITVNFESSGEGACSMSLVCSVEKAGMDMTYSWL-------S 171
+ T + + V+ + +P++ + G C ++L C V + G +++Y+W +
Sbjct: 116 VQT-ATFQVFVFDKVEKPRLQGQGKILDRGRCQVALSCLVSRDG-NVSYAWYRGSKLIQT 173
Query: 172 RGDSTYTFHEGPVLSTSWRPGDSALSYTCRANNPIS 207
G+ TY E + T +YTC +NP+S
Sbjct: 174 AGNLTYLDEEVDINGTH--------TYTCNVSNPVS 201
>gi|9910342 SLAM family member 8 [Homo sapiens]
Length = 285
Score = 45.1 bits (105), Expect = 7e-05
Identities = 50/193 (25%), Positives = 80/193 (41%), Gaps = 22/193 (11%)
Query: 29 EVVAVLQESISLPLEIPPDEEVENIIWSS----HKSLATVVPGKEGHPATIMVTNPHYQG 84
+V++ + S+ L PP +V IW S + LAT G + + + + G
Sbjct: 24 QVLSKVGGSVLLVAARPPGFQVREAIWRSLWPSEELLATFFRG-----SLETLYHSRFLG 78
Query: 85 QVSFLDPSYSLHISNLSWEDSGLYQAQVNLRTSQISTMQQYNICVYRWLSEPQ----ITV 140
+ L + SL + L DSG + + Q T Q + VY + P I V
Sbjct: 79 RAQ-LHSNLSLELGPLESGDSGNFSVLMVDTRGQPWT-QTLQLKVYDAVPRPVVQVFIAV 136
Query: 141 NFESSGEGACSMSLVCSVEKAGMDMTYSWLSRGDSTY------TFHEGPVLSTSWRPGDS 194
++ C + L C ++TYSW + F +G VLS S PGD
Sbjct: 137 ERDAQPSKTCQVFLSCWAPNIS-EITYSWRRETTMDFGMEPHSLFTDGQVLSISLGPGDR 195
Query: 195 ALSYTCRANNPIS 207
++Y+C +NP+S
Sbjct: 196 DVAYSCIVSNPVS 208
>gi|98986445 carcinoembryonic antigen-related cell adhesion molecule
5 preproprotein [Homo sapiens]
Length = 702
Score = 40.4 bits (93), Expect = 0.002
Identities = 38/143 (26%), Positives = 56/143 (39%), Gaps = 15/143 (10%)
Query: 95 LHISNLSWEDSGLYQAQVNLRTSQISTMQQYNICVYRWLSEPQITVNFESSGEGACSMSL 154
L ISN++ ++SGLY Q N S S I V L +P I+ N E +++
Sbjct: 462 LFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSAELPKPSISSNNSKPVEDKDAVAF 521
Query: 155 VCSVEKAGMDMTYSWLSRGDS------TYTFHEGPVLSTSWRPGDSALSYTCRANNPISN 208
C E + TY W G S + L+ + A +Y C N +S
Sbjct: 522 TC--EPEAQNTTYLWWVNGQSLPVSPRLQLSNGNRTLTLFNVTRNDARAYVCGIQNSVSA 579
Query: 209 VSSCPI-------PDGPFYADPN 224
S P+ PD P + P+
Sbjct: 580 NRSDPVTLDVLYGPDTPIISPPD 602
>gi|21361571 CD48 molecule [Homo sapiens]
Length = 243
Score = 37.4 bits (85), Expect = 0.015
Identities = 29/127 (22%), Positives = 56/127 (44%), Gaps = 3/127 (2%)
Query: 82 YQGQVSFLDPSYSLHISNLSWEDSGLYQAQVNLRTSQISTMQQYNICVYRWLSEPQITVN 141
++G+V S +L+IS + ED+ Y +V +T + + V + +P I +
Sbjct: 81 FKGRVRLDPQSGALYISKVQKEDNSTYIMRVLKKTGN-EQEWKIKLQVLDPVPKPVIKIE 139
Query: 142 FESSGEGACSMSLVCSVEKAGMDMTYSWLSRGDSTYTFHEGPVLSTSWRPGDSALSYTCR 201
+ C + L C + G + Y+W + VL T+ P + + YTC+
Sbjct: 140 KIEDMDDNCYLKLSCVI--PGESVNYTWYGDKRPFPKELQNSVLETTLMPHNYSRCYTCQ 197
Query: 202 ANNPISN 208
+N +S+
Sbjct: 198 VSNSVSS 204
>gi|146229333 hypothetical protein LOC284021 [Homo sapiens]
Length = 343
Score = 36.2 bits (82), Expect = 0.034
Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 19/88 (21%)
Query: 187 TSWRPGDSALSYTCRANNPISNVSSCPIPDGPFYADPNYASEKPSTA-----FCL--LAK 239
T PG+ Y C A N + N YA ++ PST FCL L
Sbjct: 184 TKKNPGEEE-EYRCEAKNRLPN-----------YATYSHPVTMPSTGGDSCPFCLKLLLP 231
Query: 240 GLLIFLLLVILAMGLWVIRVQKRHKMPR 267
GLL+ L+++IL + WV+ K K R
Sbjct: 232 GLLLLLVVIILILAFWVLPKYKTRKAMR 259
>gi|110431348 deleted in colorectal carcinoma [Homo sapiens]
Length = 1447
Score = 33.9 bits (76), Expect = 0.17
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Query: 94 SLHISNLSWEDSGLYQAQVNLRTSQISTMQQYNICVYRW-LSEPQITVNFESSGEGACSM 152
+L ISN++ +DSG+Y V + IS + + V W L+ P +ES +
Sbjct: 294 NLLISNVTDDDSGMYTCVVTYKNENISASAELTVLVPPWFLNHPSNLYAYES-----MDI 348
Query: 153 SLVCSVEKAGMDMTYSWLSRGD 174
C+V + T +W+ GD
Sbjct: 349 EFECTVSGKPVP-TVNWMKNGD 369
>gi|38683840 CD96 antigen isoform 1 precursor [Homo sapiens]
Length = 585
Score = 33.1 bits (74), Expect = 0.29
Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 8/89 (8%)
Query: 93 YSLHISNLSWEDSGLYQAQVNLRTSQIST-----MQQYNICVYRWLSEPQITVNFESSGE 147
++LH+ N+S SG Y+ + L I T + Q ++ W S I + + E
Sbjct: 101 WTLHLRNMSCSVSGRYECMLVLYPEGIQTKIYNLLIQTHVTADEWNSNHTIEIEINQTLE 160
Query: 148 GACSMSLVCSVEKAGMDMTYSWLSRGDST 176
C + S K + TY+W ST
Sbjct: 161 IPCFQN---SSSKISSEFTYAWSVENSST 186
>gi|94538343 sialic acid binding Ig-like lectin 8 [Homo sapiens]
Length = 499
Score = 33.1 bits (74), Expect = 0.29
Identities = 32/124 (25%), Positives = 53/124 (42%), Gaps = 17/124 (13%)
Query: 93 YSLHISNLSWEDSGLYQAQVNLRTSQISTMQQYNICVYRWLSEPQITVNFESSGEGACSM 152
+ L ++ W Y++Q+N +T Q+S + V P I + + E S
Sbjct: 124 FRLERGSMKWS----YKSQLNYKTKQLS------VFVTALTHRPDILIL--GTLESGHSR 171
Query: 153 SLVCSVE---KAGMDMTYSWLSRGDSTY--TFHEGPVLSTSWRPGDSALSYTCRANNPIS 207
+L CSV K G SW+ S+ T VL+ + +P D S TC+ P +
Sbjct: 172 NLTCSVPWACKQGTPPMISWIGASVSSPGPTTARSSVLTLTPKPQDHGTSLTCQVTLPGT 231
Query: 208 NVSS 211
V++
Sbjct: 232 GVTT 235
>gi|66346706 neuronal growth regulator 1 [Homo sapiens]
Length = 354
Score = 33.1 bits (74), Expect = 0.29
Identities = 35/119 (29%), Positives = 48/119 (40%), Gaps = 13/119 (10%)
Query: 93 YSLHISNLSWEDSGLY----QAQVNLRTSQISTMQQYNICVYRWLSEPQITVNFESSGEG 148
YSL I N+ D G Y Q Q RT Q+ Q +Y ++ +TVN EG
Sbjct: 101 YSLQIQNVDVTDDGPYTCSVQTQHTPRTMQVHLTVQVPPKIYDISND--MTVN-----EG 153
Query: 149 ACSMSLVCSVEKAGMDMTYSWLSRGDSTYTFHEGPVLSTSWRPGDSALSYTCRANNPIS 207
+++L C + + + SW S F G L D A Y C A N +S
Sbjct: 154 T-NVTLTC-LATGKPEPSISWRHISPSAKPFENGQYLDIYGITRDQAGEYECSAENDVS 210
>gi|226958551 Fc receptor-like 1 isoform 3 precursor [Homo sapiens]
Length = 428
Score = 32.7 bits (73), Expect = 0.38
Identities = 33/121 (27%), Positives = 49/121 (40%), Gaps = 23/121 (19%)
Query: 69 EGHPATIMVTNPHYQG---QVSF--------LDPSYS----LHISNLSWEDSGLYQAQVN 113
EG P T+ P Q Q F L P +S L I+ + ED+G Y +
Sbjct: 30 EGSPVTLTCKMPFLQSSDAQFQFCFFRDTRALGPGWSSSPKLQIAAMWKEDTGSYWCEAQ 89
Query: 114 LRTSQISTMQQYNICVYRWLSEPQITVNFESSGEGACSMS-----LVCSVEKAGMDMTYS 168
S++ ++ I V+R P V+ E+ G M L+CSV D+T+
Sbjct: 90 TMASKVLRSRRSQINVHR---VPVADVSLETQPPGGQVMEGDRLVLICSVAMGTGDITFL 146
Query: 169 W 169
W
Sbjct: 147 W 147
>gi|226958547 Fc receptor-like 1 isoform 2 precursor [Homo sapiens]
Length = 366
Score = 32.7 bits (73), Expect = 0.38
Identities = 33/121 (27%), Positives = 49/121 (40%), Gaps = 23/121 (19%)
Query: 69 EGHPATIMVTNPHYQG---QVSF--------LDPSYS----LHISNLSWEDSGLYQAQVN 113
EG P T+ P Q Q F L P +S L I+ + ED+G Y +
Sbjct: 30 EGSPVTLTCKMPFLQSSDAQFQFCFFRDTRALGPGWSSSPKLQIAAMWKEDTGSYWCEAQ 89
Query: 114 LRTSQISTMQQYNICVYRWLSEPQITVNFESSGEGACSMS-----LVCSVEKAGMDMTYS 168
S++ ++ I V+R P V+ E+ G M L+CSV D+T+
Sbjct: 90 TMASKVLRSRRSQINVHR---VPVADVSLETQPPGGQVMEGDRLVLICSVAMGTGDITFL 146
Query: 169 W 169
W
Sbjct: 147 W 147
>gi|16418419 Fc receptor-like 1 isoform 1 precursor [Homo sapiens]
Length = 429
Score = 32.7 bits (73), Expect = 0.38
Identities = 33/121 (27%), Positives = 49/121 (40%), Gaps = 23/121 (19%)
Query: 69 EGHPATIMVTNPHYQG---QVSF--------LDPSYS----LHISNLSWEDSGLYQAQVN 113
EG P T+ P Q Q F L P +S L I+ + ED+G Y +
Sbjct: 30 EGSPVTLTCKMPFLQSSDAQFQFCFFRDTRALGPGWSSSPKLQIAAMWKEDTGSYWCEAQ 89
Query: 114 LRTSQISTMQQYNICVYRWLSEPQITVNFESSGEGACSMS-----LVCSVEKAGMDMTYS 168
S++ ++ I V+R P V+ E+ G M L+CSV D+T+
Sbjct: 90 TMASKVLRSRRSQINVHR---VPVADVSLETQPPGGQVMEGDRLVLICSVAMGTGDITFL 146
Query: 169 W 169
W
Sbjct: 147 W 147
>gi|153945765 mitogen-activated protein kinase kinase kinase 1 [Homo
sapiens]
Length = 1512
Score = 32.7 bits (73), Expect = 0.38
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 134 SEPQITVNFESSGEGACSMSLVCSVEK-----AGMDMTYSWLSRGDSTYTFHEGPVLSTS 188
S P+ TV+ E +G+G C+ L S E A + + S + +T T P++ T
Sbjct: 900 SSPECTVHLEKTGKGLCATKLSASSEDISERLASISVGPSSSTTTTTTTTEQPKPMVQTK 959
Query: 189 WRPGDSALSYTCRANNPISNVSSCPIP 215
RP C ++P+S+ S P
Sbjct: 960 GRPHSQ-----CLNSSPLSHHSQLMFP 981
>gi|91208433 CD86 antigen isoform 2 precursor [Homo sapiens]
Length = 323
Score = 32.7 bits (73), Expect = 0.38
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 13/119 (10%)
Query: 29 EVVAVLQESISLPLEIPPDEEVEN----IIWSSHKSLAT--VVPGKEGHPATIMVTNPHY 82
++ A E+ LP + + + W ++L V GKE + + Y
Sbjct: 21 KIQAYFNETADLPCQFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSV----HSKY 76
Query: 83 QGQVSFLDPSYSLHISNLSWEDSGLYQAQVNLR--TSQISTMQQYN-ICVYRWLSEPQI 138
G+ SF S++L + NL +D GLYQ ++ + T I Q + + V S+P+I
Sbjct: 77 MGRTSFDSDSWTLRLHNLQIKDKGLYQCIIHHKKPTGMIRIHQMNSELSVLANFSQPEI 135
>gi|91208430 CD86 antigen isoform 1 [Homo sapiens]
Length = 329
Score = 32.7 bits (73), Expect = 0.38
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 13/119 (10%)
Query: 29 EVVAVLQESISLPLEIPPDEEVEN----IIWSSHKSLAT--VVPGKEGHPATIMVTNPHY 82
++ A E+ LP + + + W ++L V GKE + + Y
Sbjct: 27 KIQAYFNETADLPCQFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSV----HSKY 82
Query: 83 QGQVSFLDPSYSLHISNLSWEDSGLYQAQVNLR--TSQISTMQQYN-ICVYRWLSEPQI 138
G+ SF S++L + NL +D GLYQ ++ + T I Q + + V S+P+I
Sbjct: 83 MGRTSFDSDSWTLRLHNLQIKDKGLYQCIIHHKKPTGMIRIHQMNSELSVLANFSQPEI 141
>gi|68161541 carcinoembryonic antigen-related cell adhesion molecule
1 isoform 2 precursor [Homo sapiens]
Length = 464
Score = 32.0 bits (71), Expect = 0.65
Identities = 34/143 (23%), Positives = 59/143 (41%), Gaps = 23/143 (16%)
Query: 87 SFLDPSYSLHISNLSWEDSGLYQAQVNLRTSQISTMQQYNICVYRW---LSEPQITVNFE 143
+F + L I N++ +SG Y N + + I V +++PQI +
Sbjct: 276 TFQQSTQELFIPNITVNNSGSYTCHANNSVTGCNRTTVKTIIVTELSPVVAKPQIKASKT 335
Query: 144 SSGEGACSMSLVCSVEKAGMDMTYSW------------LSRGDSTYTFHEGPVLSTSWRP 191
+ S++L CS G+ + + + LS+G++T + + PV
Sbjct: 336 TVTGDKDSVNLTCSTNDTGISIRWFFKNQSLPSSERMKLSQGNTTLSIN--PVKR----- 388
Query: 192 GDSALSYTCRANNPISNVSSCPI 214
+ A +Y C NPIS S PI
Sbjct: 389 -EDAGTYWCEVFNPISKNQSDPI 410
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.132 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,386,836
Number of Sequences: 37866
Number of extensions: 547800
Number of successful extensions: 1709
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 1654
Number of HSP's gapped (non-prelim): 71
length of query: 289
length of database: 18,247,518
effective HSP length: 101
effective length of query: 188
effective length of database: 14,423,052
effective search space: 2711533776
effective search space used: 2711533776
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.