Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: FCRL1 Sequence: fasta or formatted (429aa) NCBI GI: 16418419
Description:

Fc receptor-like 1 isoform 1 precursor

Referenced in:

Fc Receptors

Other entries for this name:
alt prot [366aa] Fc receptor-like 1 isoform 2 precursor
alt prot [428aa] Fc receptor-like 1 isoform 3 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         34           2
 C cysteine            2.3         10           1
 D aspartate           3.7         16           1
 E glutamate           6.8         29           2
 F phenylalanine       2.8         12           2
 G glycine             7.2         31           3
 H histidine           1.6          7           1
 I isoleucine          4.0         17           1
 K lysine              2.3         10           1
 L leucine            11.2         48           4
 M methionine          2.1          9           1
 N asparagine          3.3         14           2
 P proline             7.2         31           2
 Q glutamine           4.2         18           1
 R arginine            5.8         25           2
 S serine             10.0         43           3
 T threonine           5.8         25           1
 V valine              6.5         28           2
 W tryptophan          1.2          5           1
 Y tyrosine            4.0         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Fc receptor-like 1 isoform 1 precursor 
FCRL1                 0.993   Fc receptor-like 1 isoform 3 precursor 
FCRL1                 0.752   Fc receptor-like 1 isoform 2 precursor 
FCRL2                 0.489   Fc receptor-like 2 precursor 
FCRL3                 0.380   Fc receptor-like 3 precursor 
FCRL5                 0.256   Fc receptor-like 5 
FCRL4                 0.183   Fc receptor-like 4 precursor 
FCRL6                 0.112   Fc receptor-like 6 
BOC                   0.051   brother of CDO 
CD22                  0.046   CD22 molecule 
LOC100292387          0.046   PREDICTED: similar to hemicentin 2 
HMCN2                 0.046   PREDICTED: hemicentin 2 
SIGLEC1               0.045   sialoadhesin precursor 
CADM1                 0.044   immunoglobulin superfamily, member 4D isoform 2 [Ho...
TTN                   0.044   titin isoform N2-A 
CADM1                 0.044   immunoglobulin superfamily, member 4D isoform 1 [Ho...
PTK7                  0.044   PTK7 protein tyrosine kinase 7 isoform a precursor [...
PTK7                  0.044   PTK7 protein tyrosine kinase 7 isoform d precursor [...
CEACAM20              0.044   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.044   carcinoembryonic antigen-related cell adhesion mole...
HMCN2                 0.043   PREDICTED: hemicentin 2 
HMCN2                 0.043   PREDICTED: hemicentin 2 
ROBO1                 0.042   roundabout 1 isoform d 
ROBO1                 0.042   roundabout 1 isoform c 
HSPG2                 0.042   heparan sulfate proteoglycan 2 
LOC642132             0.042   PREDICTED: similar to roundabout 1 isoform 1 
LOC642132             0.042   PREDICTED: similar to roundabout 1 isoform 2 
HMCN1                 0.040   hemicentin 1 
IGLON5                0.040   IgLON family member 5 
CEACAM1               0.039   carcinoembryonic antigen-related cell adhesion molec...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press