Guide to the Human Genome
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Name: MPZL1 Sequence: fasta or formatted (119aa) NCBI GI: 226054871
Description:

myelin protein zero-like 1 isoform c

Referenced in:

Oligodendrocytes and Myelin

Other entries for this name:
alt prot [269aa] myelin protein zero-like 1 isoform a
alt prot [209aa] myelin protein zero-like 1 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.4         16           3
 C cysteine            0.8          1           1
 D aspartate           4.2          5           1
 E glutamate           3.4          4           1
 F phenylalanine       2.5          3           1
 G glycine            10.1         12           2
 H histidine           2.5          3           2
 I isoleucine          4.2          5           1
 K lysine              5.9          7           1
 L leucine             7.6          9           2
 M methionine          0.8          1           1
 N asparagine          2.5          3           1
 P proline             3.4          4           1
 Q glutamine           2.5          3           1
 R arginine            2.5          3           2
 S serine             11.8         14           1
 T threonine           8.4         10           2
 V valine              8.4         10           2
 W tryptophan          2.5          3           1
 Y tyrosine            2.5          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myelin protein zero-like 1 isoform c 
MPZL1                 0.682   myelin protein zero-like 1 isoform b 
MPZL1                 0.682   myelin protein zero-like 1 isoform a 
MPZL2                 0.084   myelin protein zero-like 2 precursor 
MPZL2                 0.084   myelin protein zero-like 2 precursor 
MPZ                   0.065   myelin protein zero 
PTGFRN                0.056   prostaglandin F2 receptor negative regulator 
VSIG2                 0.042   V-set and immunoglobulin domain containing 2 
MPZL3                 0.042   myelin protein zero-like 3 
SCN2B                 0.019   sodium channel, voltage-gated, type II, beta 
VSTM2B                0.014   V-set and transmembrane domain containing 2B 
VSTM2B                0.014   PREDICTED: V-set and transmembrane domain containin...
VSTM2B                0.014   PREDICTED: V-set and transmembrane domain containin...
VSTM2B                0.014   PREDICTED: V-set and transmembrane domain containin...
LOC100294067          0.009   PREDICTED: similar to rCG47812 
NCR3                  0.009   natural cytotoxicity triggering receptor 3 isoform ...
NCR3                  0.009   natural cytotoxicity triggering receptor 3 isoform a...
NCR3                  0.009   natural cytotoxicity triggering receptor 3 isoform ...
MUC12                 0.009   PREDICTED: mucin 12 
LOC100133714          0.009   PREDICTED: similar to Mucin-12, partial 
MUC12                 0.009   PREDICTED: mucin 12 
TNRC6A                0.009   trinucleotide repeat containing 6A 
SLC2A6                0.009   solute carrier family 2 (facilitated glucose transp...
SCN4B                 0.009   sodium channel, voltage-gated, type IV, beta isoform...
MAN2C1                0.009   mannosidase, alpha, class 2C, member 1 
GCN1L1                0.009   GCN1 general control of amino-acid synthesis 1-like ...
PVRL1                 0.005   poliovirus receptor-related 1 isoform 3 
PVRL1                 0.005   poliovirus receptor-related 1 isoform 2 
PVRL1                 0.005   poliovirus receptor-related 1 isoform 1 
LAG3                  0.005   lymphocyte-activation protein 3 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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