SCN2B 30811

Name: SCN2B	Sequence: fasta or formatted (215aa)		NCBI GI: 4759066
Description: sodium channel, voltage-gated, type II, beta		Referenced in: Sodium Channels
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.7 8 1 C cysteine 2.8 6 1 D aspartate 5.6 12 2 E glutamate 7.4 16 3 F phenylalanine 4.7 10 2 G glycine 6.5 14 2 H histidine 2.3 5 1 I isoleucine 3.3 7 2 K lysine 5.6 12 2 L leucine 9.3 20 1 M methionine 3.7 8 1 N asparagine 6.0 13 2 P proline 6.0 13 2 Q glutamine 3.3 7 1 R arginine 6.0 13 2 S serine 6.5 14 1 T threonine 4.7 10 1 V valine 9.3 20 2 W tryptophan 0.9 2 1 Y tyrosine 2.3 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sodium channel, voltage-gated, type II, beta MPZL2 0.160 myelin protein zero-like 2 precursor MPZL2 0.160 myelin protein zero-like 2 precursor SCN4B 0.136 sodium channel, voltage-gated, type IV, beta isoform... MPZL1 0.105 myelin protein zero-like 1 isoform a MPZL1 0.100 myelin protein zero-like 1 isoform b MPZ 0.098 myelin protein zero MPZL3 0.095 myelin protein zero-like 3 SCN4B 0.074 sodium channel, voltage-gated, type IV, beta isofor... AMICA1 0.067 adhesion molecule, interacts with CXADR antigen 1 i... AMICA1 0.067 adhesion molecule, interacts with CXADR antigen 1 i... VSIG1 0.067 V-set and immunoglobulin domain containing 1 IGSF11 0.064 immunoglobulin superfamily, member 11 isoform b [Hom... IGSF11 0.062 immunoglobulin superfamily, member 11 isoform a [Hom... VSIG2 0.050 V-set and immunoglobulin domain containing 2 SIGLEC1 0.048 sialoadhesin precursor PVRL1 0.043 poliovirus receptor-related 1 isoform 3 PVRL1 0.043 poliovirus receptor-related 1 isoform 2 PVRL1 0.043 poliovirus receptor-related 1 isoform 1 CXADR 0.041 coxsackie virus and adenovirus receptor precursor [Ho... SCN3B 0.036 voltage-gated sodium channel beta-3 subunit precursor... SCN3B 0.036 voltage-gated sodium channel beta-3 subunit precurso... VSIG8 0.036 V-set and immunoglobulin domain containing 8 TIMD4 0.033 T-cell immunoglobulin and mucin domain containing 4... TIMD4 0.033 T-cell immunoglobulin and mucin domain containing 4... LOC100130701 0.031 PREDICTED: similar to hCG1657343 LOC100130701 0.031 PREDICTED: similar to hCG1657343 LOC100130701 0.031 PREDICTED: similar to hCG1657343 PVRL4 0.031 poliovirus receptor-related 4 GPA33 0.031 transmembrane glycoprotein A33 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.