SCN4B 24700

Name: SCN4B	Sequence: fasta or formatted (228aa)		NCBI GI: 28372555
Description: sodium channel, voltage-gated, type IV, beta isoform 1 precursor		Referenced in: Sodium Channels
Other entries for this name: alt prot [94aa] sodium channel, voltage-gated, type IV, beta isoform 2 alt prot [118aa] sodium channel, voltage-gated, type IV, beta isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.9 9 1 C cysteine 1.8 4 1 D aspartate 5.7 13 3 E glutamate 6.6 15 2 F phenylalanine 3.9 9 1 G glycine 8.3 19 2 H histidine 1.8 4 2 I isoleucine 7.5 17 2 K lysine 9.6 22 3 L leucine 13.2 30 2 M methionine 0.9 2 1 N asparagine 5.3 12 2 P proline 3.9 9 2 Q glutamine 0.9 2 1 R arginine 2.6 6 1 S serine 6.6 15 3 T threonine 7.5 17 1 V valine 7.9 18 2 W tryptophan 0.9 2 1 Y tyrosine 1.3 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sodium channel, voltage-gated, type IV, beta isoform... SCN4B 0.483 sodium channel, voltage-gated, type IV, beta isofor... SCN4B 0.270 sodium channel, voltage-gated, type IV, beta isofor... SCN2B 0.133 sodium channel, voltage-gated, type II, beta MPZ 0.084 myelin protein zero MPZL1 0.068 myelin protein zero-like 1 isoform a MPZL2 0.058 myelin protein zero-like 2 precursor MPZL2 0.058 myelin protein zero-like 2 precursor MPZL1 0.058 myelin protein zero-like 1 isoform b MFAP3L 0.042 microfibrillar-associated protein 3-like isoform 1 ... CD226 0.037 CD226 molecule precursor ERMAP 0.037 erythroblast membrane-associated protein precursor [... ERMAP 0.037 erythroblast membrane-associated protein precursor [... VSTM2B 0.035 V-set and transmembrane domain containing 2B VSTM2B 0.035 PREDICTED: V-set and transmembrane domain containin... VSTM2B 0.035 PREDICTED: V-set and transmembrane domain containin... VSTM2B 0.035 PREDICTED: V-set and transmembrane domain containin... IGSF11 0.035 immunoglobulin superfamily, member 11 isoform b [Hom... MPZL3 0.035 myelin protein zero-like 3 AMICA1 0.033 adhesion molecule, interacts with CXADR antigen 1 i... AMICA1 0.033 adhesion molecule, interacts with CXADR antigen 1 i... IGSF11 0.030 immunoglobulin superfamily, member 11 isoform a [Hom... CADM4 0.028 cell adhesion molecule 4 FGFR1 0.028 fibroblast growth factor receptor 1 isoform 9 precur... FGFR1 0.028 fibroblast growth factor receptor 1 isoform 4 precur... FGFR1 0.028 fibroblast growth factor receptor 1 isoform 3 precur... FGFR1 0.028 fibroblast growth factor receptor 1 isoform 2 precur... FGFR1 0.028 fibroblast growth factor receptor 1 isoform 1 precu... BTN1A1 0.028 butyrophilin, subfamily 1, member A1 FGFR2 0.028 fibroblast growth factor receptor 2 isoform 4 precu... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.