Guide to the Human Genome
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Name: MPZL1 Sequence: fasta or formatted (269aa) NCBI GI: 4506357
Description:

myelin protein zero-like 1 isoform a

Referenced in:

Oligodendrocytes and Myelin

Other entries for this name:
alt prot [119aa] myelin protein zero-like 1 isoform c
alt prot [209aa] myelin protein zero-like 1 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         21           3
 C cysteine            1.1          3           1
 D aspartate           4.8         13           1
 E glutamate           3.3          9           1
 F phenylalanine       3.0          8           2
 G glycine             8.2         22           2
 H histidine           2.6          7           2
 I isoleucine          5.6         15           1
 K lysine              6.3         17           2
 L leucine             8.2         22           2
 M methionine          1.1          3           1
 N asparagine          3.7         10           1
 P proline             5.6         15           2
 Q glutamine           3.3          9           1
 R arginine            3.3          9           2
 S serine             10.4         28           1
 T threonine           5.9         16           2
 V valine             10.0         27           3
 W tryptophan          1.9          5           1
 Y tyrosine            3.7         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myelin protein zero-like 1 isoform a 
MPZL1                 0.741   myelin protein zero-like 1 isoform b 
MPZL1                 0.282   myelin protein zero-like 1 isoform c 
MPZ                   0.208   myelin protein zero 
MPZL2                 0.151   myelin protein zero-like 2 precursor 
MPZL2                 0.151   myelin protein zero-like 2 precursor 
MPZL3                 0.125   myelin protein zero-like 3 
SCN2B                 0.085   sodium channel, voltage-gated, type II, beta 
VSIG1                 0.073   V-set and immunoglobulin domain containing 1 
CXADR                 0.069   coxsackie virus and adenovirus receptor precursor [Ho...
AMICA1                0.058   adhesion molecule, interacts with CXADR antigen 1 i...
AMICA1                0.058   adhesion molecule, interacts with CXADR antigen 1 i...
SCN4B                 0.056   sodium channel, voltage-gated, type IV, beta isoform...
IGSF11                0.054   immunoglobulin superfamily, member 11 isoform b [Hom...
IGSF11                0.050   immunoglobulin superfamily, member 11 isoform a [Hom...
SCN1B                 0.042   sodium channel, voltage-gated, type I, beta isoform a...
SCN3B                 0.042   voltage-gated sodium channel beta-3 subunit precursor...
SCN3B                 0.042   voltage-gated sodium channel beta-3 subunit precurso...
SCN1B                 0.041   sodium channel, voltage-gated, type I, beta isoform ...
GPA33                 0.037   transmembrane glycoprotein A33 precursor 
PVRL1                 0.033   poliovirus receptor-related 1 isoform 3 
PVRL1                 0.033   poliovirus receptor-related 1 isoform 2 
PVRL1                 0.033   poliovirus receptor-related 1 isoform 1 
SCN4B                 0.033   sodium channel, voltage-gated, type IV, beta isofor...
VSIG2                 0.031   V-set and immunoglobulin domain containing 2 
CEACAM4               0.027   carcinoembryonic antigen-related cell adhesion molec...
CEACAM3               0.027   carcinoembryonic antigen-related cell adhesion mole...
VSIG8                 0.023   V-set and immunoglobulin domain containing 8 
CTLA4                 0.019   cytotoxic T-lymphocyte-associated protein 4 isoform ...
HLA-F                 0.019   major histocompatibility complex, class I, F isofor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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