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Search of human proteins with 224282117
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|224282117 splicing factor, arginine/serine-rich 14 [Homo
sapiens]
(1082 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|224282119 splicing factor, arginine/serine-rich 14 [Homo sapi... 2180 0.0
gi|224282117 splicing factor, arginine/serine-rich 14 [Homo sapi... 2180 0.0
gi|33469964 splicing factor 4 [Homo sapiens] 80 1e-14
gi|63003897 transcription factor NRF [Homo sapiens] 54 6e-07
gi|20127479 RNA binding motif protein 10 isoform 1 [Homo sapiens] 53 1e-06
gi|23111018 RNA binding motif protein 10 isoform 2 [Homo sapiens] 53 1e-06
gi|5032031 RNA binding motif protein 5 [Homo sapiens] 50 2e-05
gi|8922313 G patch domain containing 2 [Homo sapiens] 50 2e-05
gi|39725952 angiogenic factor VG5Q [Homo sapiens] 49 2e-05
gi|148277064 cut-like homeobox 1 isoform a [Homo sapiens] 46 2e-04
gi|167900474 coiled-coil domain containing 75 [Homo sapiens] 45 5e-04
gi|226371735 iroquois homeobox 3 [Homo sapiens] 44 8e-04
gi|5453880 acidic (leucine-rich) nuclear phosphoprotein 32 famil... 42 0.003
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 42 0.003
gi|148277037 AP2 associated kinase 1 [Homo sapiens] 42 0.004
gi|166795264 AE binding protein 2 isoform b [Homo sapiens] 42 0.004
gi|166795262 AE binding protein 2 isoform a [Homo sapiens] 42 0.004
gi|55741677 SET domain containing 1A [Homo sapiens] 41 0.005
gi|49087132 sal-like 2 [Homo sapiens] 41 0.005
gi|7657335 misshapen/NIK-related kinase isoform 1 [Homo sapiens] 41 0.005
gi|33946282 hypothetical protein LOC25962 isoform 1 [Homo sapiens] 40 0.009
gi|33946280 hypothetical protein LOC25962 isoform 2 [Homo sapiens] 40 0.009
gi|119226260 calcium homeostasis endoplasmic reticulum protein [... 40 0.009
gi|148747556 PIN2-interacting protein 1 [Homo sapiens] 40 0.012
gi|56788356 tuftelin interacting protein 11 [Homo sapiens] 40 0.012
gi|8393259 tuftelin interacting protein 11 [Homo sapiens] 40 0.012
gi|74325776 MACRO domain containing 2 isoform 2 [Homo sapiens] 40 0.012
gi|53831995 splicing factor 3a, subunit 1, 120kDa isoform 2 [Hom... 40 0.012
gi|5032087 splicing factor 3a, subunit 1, 120kDa isoform 1 [Homo... 40 0.012
gi|117968621 MACRO domain containing 2 isoform 1 [Homo sapiens] 40 0.016
>gi|224282119 splicing factor, arginine/serine-rich 14 [Homo sapiens]
Length = 1082
Score = 2180 bits (5648), Expect = 0.0
Identities = 1082/1082 (100%), Positives = 1082/1082 (100%)
Query: 1 MAARRITQETFDAVLQEKAKRYHMDASGEAVSETLQFKAQDLLRAVPRSRAEMYDDVHSD 60
MAARRITQETFDAVLQEKAKRYHMDASGEAVSETLQFKAQDLLRAVPRSRAEMYDDVHSD
Sbjct: 1 MAARRITQETFDAVLQEKAKRYHMDASGEAVSETLQFKAQDLLRAVPRSRAEMYDDVHSD 60
Query: 61 GRYSLSGSVAHSRDAGREGLRSDVFPGPSFRSSNPSISDDSYFRKECGRDLEFSHSDSRD 120
GRYSLSGSVAHSRDAGREGLRSDVFPGPSFRSSNPSISDDSYFRKECGRDLEFSHSDSRD
Sbjct: 61 GRYSLSGSVAHSRDAGREGLRSDVFPGPSFRSSNPSISDDSYFRKECGRDLEFSHSDSRD 120
Query: 121 QVIGHRKLGHFRSQDWKFALRGSWEQDFGHPVSQESSWSQEYSFGPSAVLGDFGSSRLIE 180
QVIGHRKLGHFRSQDWKFALRGSWEQDFGHPVSQESSWSQEYSFGPSAVLGDFGSSRLIE
Sbjct: 121 QVIGHRKLGHFRSQDWKFALRGSWEQDFGHPVSQESSWSQEYSFGPSAVLGDFGSSRLIE 180
Query: 181 KECLEKESRDYDVDHPGEADSVLRGGSQVQARGRALNIVDQEGSLLGKGETQGLLTAKGG 240
KECLEKESRDYDVDHPGEADSVLRGGSQVQARGRALNIVDQEGSLLGKGETQGLLTAKGG
Sbjct: 181 KECLEKESRDYDVDHPGEADSVLRGGSQVQARGRALNIVDQEGSLLGKGETQGLLTAKGG 240
Query: 241 VGKLVTLRNVSTKKIPTVNRITPKTQGTNQIQKNTPSPDVTLGTNPGTEDIQFPIQKIPL 300
VGKLVTLRNVSTKKIPTVNRITPKTQGTNQIQKNTPSPDVTLGTNPGTEDIQFPIQKIPL
Sbjct: 241 VGKLVTLRNVSTKKIPTVNRITPKTQGTNQIQKNTPSPDVTLGTNPGTEDIQFPIQKIPL 300
Query: 301 GLDLKNLRLPRRKMSFDIIDKSDVFSRFGIEIIKWAGFHTIKDDIKFSQLFQTLFELETE 360
GLDLKNLRLPRRKMSFDIIDKSDVFSRFGIEIIKWAGFHTIKDDIKFSQLFQTLFELETE
Sbjct: 301 GLDLKNLRLPRRKMSFDIIDKSDVFSRFGIEIIKWAGFHTIKDDIKFSQLFQTLFELETE 360
Query: 361 TCAKMLASFKCSLKPEHRDFCFFTIKFLKHSALKTPRVDNEFLNMLLDKGAVKTKNCFFE 420
TCAKMLASFKCSLKPEHRDFCFFTIKFLKHSALKTPRVDNEFLNMLLDKGAVKTKNCFFE
Sbjct: 361 TCAKMLASFKCSLKPEHRDFCFFTIKFLKHSALKTPRVDNEFLNMLLDKGAVKTKNCFFE 420
Query: 421 IIKPFDKYIMRLQDRLLKSVTPLLMACNAYELSVKMKTLSNPLDLALALETTNSLCRKSL 480
IIKPFDKYIMRLQDRLLKSVTPLLMACNAYELSVKMKTLSNPLDLALALETTNSLCRKSL
Sbjct: 421 IIKPFDKYIMRLQDRLLKSVTPLLMACNAYELSVKMKTLSNPLDLALALETTNSLCRKSL 480
Query: 481 ALLGQTFSLASSFRQEKILEAVGLQDIAPSPAAFPNFEDSTLFGREYIDHLKAWLVSSGC 540
ALLGQTFSLASSFRQEKILEAVGLQDIAPSPAAFPNFEDSTLFGREYIDHLKAWLVSSGC
Sbjct: 481 ALLGQTFSLASSFRQEKILEAVGLQDIAPSPAAFPNFEDSTLFGREYIDHLKAWLVSSGC 540
Query: 541 PLQVKKAEPEPMREEEKMIPPTKPEIQAKAPSSLSDAVPQRADHRVVGTIDQLVKRVIEG 600
PLQVKKAEPEPMREEEKMIPPTKPEIQAKAPSSLSDAVPQRADHRVVGTIDQLVKRVIEG
Sbjct: 541 PLQVKKAEPEPMREEEKMIPPTKPEIQAKAPSSLSDAVPQRADHRVVGTIDQLVKRVIEG 600
Query: 601 SLSPKERTLLKEDPAYWFLSDENSLEYKYYKLKLAEMQRMSENLRGADQKPTSADCAVRA 660
SLSPKERTLLKEDPAYWFLSDENSLEYKYYKLKLAEMQRMSENLRGADQKPTSADCAVRA
Sbjct: 601 SLSPKERTLLKEDPAYWFLSDENSLEYKYYKLKLAEMQRMSENLRGADQKPTSADCAVRA 660
Query: 661 MLYSRAVRNLKKKLLPWQRRGLLRAQGLRGWKARRATTGTQTLLSSGTRLKHHGRQAPGL 720
MLYSRAVRNLKKKLLPWQRRGLLRAQGLRGWKARRATTGTQTLLSSGTRLKHHGRQAPGL
Sbjct: 661 MLYSRAVRNLKKKLLPWQRRGLLRAQGLRGWKARRATTGTQTLLSSGTRLKHHGRQAPGL 720
Query: 721 SQAKPSLPDRNDAAKDCPPDPVGPSPQDPSLEASGPSPKPAGVDISEAPQTSSPCPSADI 780
SQAKPSLPDRNDAAKDCPPDPVGPSPQDPSLEASGPSPKPAGVDISEAPQTSSPCPSADI
Sbjct: 721 SQAKPSLPDRNDAAKDCPPDPVGPSPQDPSLEASGPSPKPAGVDISEAPQTSSPCPSADI 780
Query: 781 DMKTMETAEKLARFVAQVGPEIEQFSIENSTDNPDLWFLHDQNSSAFKFYRKKVFELCPS 840
DMKTMETAEKLARFVAQVGPEIEQFSIENSTDNPDLWFLHDQNSSAFKFYRKKVFELCPS
Sbjct: 781 DMKTMETAEKLARFVAQVGPEIEQFSIENSTDNPDLWFLHDQNSSAFKFYRKKVFELCPS 840
Query: 841 ICFTSSPHNLHTGGGDTTGSQESPVDLMEGEAEFEDEPPPREAELESPEVMPEEEDEDDE 900
ICFTSSPHNLHTGGGDTTGSQESPVDLMEGEAEFEDEPPPREAELESPEVMPEEEDEDDE
Sbjct: 841 ICFTSSPHNLHTGGGDTTGSQESPVDLMEGEAEFEDEPPPREAELESPEVMPEEEDEDDE 900
Query: 901 DGGEEAPAPGGAGKSEGSTPADGLPGEAAEDDLAGAPALSQASSGTCFPRKRISSKSLKV 960
DGGEEAPAPGGAGKSEGSTPADGLPGEAAEDDLAGAPALSQASSGTCFPRKRISSKSLKV
Sbjct: 901 DGGEEAPAPGGAGKSEGSTPADGLPGEAAEDDLAGAPALSQASSGTCFPRKRISSKSLKV 960
Query: 961 GMIPAPKRVCLIQEPKVHEPVRIAYDRPRGRPMSKKKKPKDLDFAQQKLTDKNLGFQMLQ 1020
GMIPAPKRVCLIQEPKVHEPVRIAYDRPRGRPMSKKKKPKDLDFAQQKLTDKNLGFQMLQ
Sbjct: 961 GMIPAPKRVCLIQEPKVHEPVRIAYDRPRGRPMSKKKKPKDLDFAQQKLTDKNLGFQMLQ 1020
Query: 1021 KMGWKEGHGLGSLGKGIREPVSVGTPSEGEGLGADGQEHKEDTFDVFRQRMMQMYRHKRA 1080
KMGWKEGHGLGSLGKGIREPVSVGTPSEGEGLGADGQEHKEDTFDVFRQRMMQMYRHKRA
Sbjct: 1021 KMGWKEGHGLGSLGKGIREPVSVGTPSEGEGLGADGQEHKEDTFDVFRQRMMQMYRHKRA 1080
Query: 1081 NK 1082
NK
Sbjct: 1081 NK 1082
>gi|224282117 splicing factor, arginine/serine-rich 14 [Homo sapiens]
Length = 1082
Score = 2180 bits (5648), Expect = 0.0
Identities = 1082/1082 (100%), Positives = 1082/1082 (100%)
Query: 1 MAARRITQETFDAVLQEKAKRYHMDASGEAVSETLQFKAQDLLRAVPRSRAEMYDDVHSD 60
MAARRITQETFDAVLQEKAKRYHMDASGEAVSETLQFKAQDLLRAVPRSRAEMYDDVHSD
Sbjct: 1 MAARRITQETFDAVLQEKAKRYHMDASGEAVSETLQFKAQDLLRAVPRSRAEMYDDVHSD 60
Query: 61 GRYSLSGSVAHSRDAGREGLRSDVFPGPSFRSSNPSISDDSYFRKECGRDLEFSHSDSRD 120
GRYSLSGSVAHSRDAGREGLRSDVFPGPSFRSSNPSISDDSYFRKECGRDLEFSHSDSRD
Sbjct: 61 GRYSLSGSVAHSRDAGREGLRSDVFPGPSFRSSNPSISDDSYFRKECGRDLEFSHSDSRD 120
Query: 121 QVIGHRKLGHFRSQDWKFALRGSWEQDFGHPVSQESSWSQEYSFGPSAVLGDFGSSRLIE 180
QVIGHRKLGHFRSQDWKFALRGSWEQDFGHPVSQESSWSQEYSFGPSAVLGDFGSSRLIE
Sbjct: 121 QVIGHRKLGHFRSQDWKFALRGSWEQDFGHPVSQESSWSQEYSFGPSAVLGDFGSSRLIE 180
Query: 181 KECLEKESRDYDVDHPGEADSVLRGGSQVQARGRALNIVDQEGSLLGKGETQGLLTAKGG 240
KECLEKESRDYDVDHPGEADSVLRGGSQVQARGRALNIVDQEGSLLGKGETQGLLTAKGG
Sbjct: 181 KECLEKESRDYDVDHPGEADSVLRGGSQVQARGRALNIVDQEGSLLGKGETQGLLTAKGG 240
Query: 241 VGKLVTLRNVSTKKIPTVNRITPKTQGTNQIQKNTPSPDVTLGTNPGTEDIQFPIQKIPL 300
VGKLVTLRNVSTKKIPTVNRITPKTQGTNQIQKNTPSPDVTLGTNPGTEDIQFPIQKIPL
Sbjct: 241 VGKLVTLRNVSTKKIPTVNRITPKTQGTNQIQKNTPSPDVTLGTNPGTEDIQFPIQKIPL 300
Query: 301 GLDLKNLRLPRRKMSFDIIDKSDVFSRFGIEIIKWAGFHTIKDDIKFSQLFQTLFELETE 360
GLDLKNLRLPRRKMSFDIIDKSDVFSRFGIEIIKWAGFHTIKDDIKFSQLFQTLFELETE
Sbjct: 301 GLDLKNLRLPRRKMSFDIIDKSDVFSRFGIEIIKWAGFHTIKDDIKFSQLFQTLFELETE 360
Query: 361 TCAKMLASFKCSLKPEHRDFCFFTIKFLKHSALKTPRVDNEFLNMLLDKGAVKTKNCFFE 420
TCAKMLASFKCSLKPEHRDFCFFTIKFLKHSALKTPRVDNEFLNMLLDKGAVKTKNCFFE
Sbjct: 361 TCAKMLASFKCSLKPEHRDFCFFTIKFLKHSALKTPRVDNEFLNMLLDKGAVKTKNCFFE 420
Query: 421 IIKPFDKYIMRLQDRLLKSVTPLLMACNAYELSVKMKTLSNPLDLALALETTNSLCRKSL 480
IIKPFDKYIMRLQDRLLKSVTPLLMACNAYELSVKMKTLSNPLDLALALETTNSLCRKSL
Sbjct: 421 IIKPFDKYIMRLQDRLLKSVTPLLMACNAYELSVKMKTLSNPLDLALALETTNSLCRKSL 480
Query: 481 ALLGQTFSLASSFRQEKILEAVGLQDIAPSPAAFPNFEDSTLFGREYIDHLKAWLVSSGC 540
ALLGQTFSLASSFRQEKILEAVGLQDIAPSPAAFPNFEDSTLFGREYIDHLKAWLVSSGC
Sbjct: 481 ALLGQTFSLASSFRQEKILEAVGLQDIAPSPAAFPNFEDSTLFGREYIDHLKAWLVSSGC 540
Query: 541 PLQVKKAEPEPMREEEKMIPPTKPEIQAKAPSSLSDAVPQRADHRVVGTIDQLVKRVIEG 600
PLQVKKAEPEPMREEEKMIPPTKPEIQAKAPSSLSDAVPQRADHRVVGTIDQLVKRVIEG
Sbjct: 541 PLQVKKAEPEPMREEEKMIPPTKPEIQAKAPSSLSDAVPQRADHRVVGTIDQLVKRVIEG 600
Query: 601 SLSPKERTLLKEDPAYWFLSDENSLEYKYYKLKLAEMQRMSENLRGADQKPTSADCAVRA 660
SLSPKERTLLKEDPAYWFLSDENSLEYKYYKLKLAEMQRMSENLRGADQKPTSADCAVRA
Sbjct: 601 SLSPKERTLLKEDPAYWFLSDENSLEYKYYKLKLAEMQRMSENLRGADQKPTSADCAVRA 660
Query: 661 MLYSRAVRNLKKKLLPWQRRGLLRAQGLRGWKARRATTGTQTLLSSGTRLKHHGRQAPGL 720
MLYSRAVRNLKKKLLPWQRRGLLRAQGLRGWKARRATTGTQTLLSSGTRLKHHGRQAPGL
Sbjct: 661 MLYSRAVRNLKKKLLPWQRRGLLRAQGLRGWKARRATTGTQTLLSSGTRLKHHGRQAPGL 720
Query: 721 SQAKPSLPDRNDAAKDCPPDPVGPSPQDPSLEASGPSPKPAGVDISEAPQTSSPCPSADI 780
SQAKPSLPDRNDAAKDCPPDPVGPSPQDPSLEASGPSPKPAGVDISEAPQTSSPCPSADI
Sbjct: 721 SQAKPSLPDRNDAAKDCPPDPVGPSPQDPSLEASGPSPKPAGVDISEAPQTSSPCPSADI 780
Query: 781 DMKTMETAEKLARFVAQVGPEIEQFSIENSTDNPDLWFLHDQNSSAFKFYRKKVFELCPS 840
DMKTMETAEKLARFVAQVGPEIEQFSIENSTDNPDLWFLHDQNSSAFKFYRKKVFELCPS
Sbjct: 781 DMKTMETAEKLARFVAQVGPEIEQFSIENSTDNPDLWFLHDQNSSAFKFYRKKVFELCPS 840
Query: 841 ICFTSSPHNLHTGGGDTTGSQESPVDLMEGEAEFEDEPPPREAELESPEVMPEEEDEDDE 900
ICFTSSPHNLHTGGGDTTGSQESPVDLMEGEAEFEDEPPPREAELESPEVMPEEEDEDDE
Sbjct: 841 ICFTSSPHNLHTGGGDTTGSQESPVDLMEGEAEFEDEPPPREAELESPEVMPEEEDEDDE 900
Query: 901 DGGEEAPAPGGAGKSEGSTPADGLPGEAAEDDLAGAPALSQASSGTCFPRKRISSKSLKV 960
DGGEEAPAPGGAGKSEGSTPADGLPGEAAEDDLAGAPALSQASSGTCFPRKRISSKSLKV
Sbjct: 901 DGGEEAPAPGGAGKSEGSTPADGLPGEAAEDDLAGAPALSQASSGTCFPRKRISSKSLKV 960
Query: 961 GMIPAPKRVCLIQEPKVHEPVRIAYDRPRGRPMSKKKKPKDLDFAQQKLTDKNLGFQMLQ 1020
GMIPAPKRVCLIQEPKVHEPVRIAYDRPRGRPMSKKKKPKDLDFAQQKLTDKNLGFQMLQ
Sbjct: 961 GMIPAPKRVCLIQEPKVHEPVRIAYDRPRGRPMSKKKKPKDLDFAQQKLTDKNLGFQMLQ 1020
Query: 1021 KMGWKEGHGLGSLGKGIREPVSVGTPSEGEGLGADGQEHKEDTFDVFRQRMMQMYRHKRA 1080
KMGWKEGHGLGSLGKGIREPVSVGTPSEGEGLGADGQEHKEDTFDVFRQRMMQMYRHKRA
Sbjct: 1021 KMGWKEGHGLGSLGKGIREPVSVGTPSEGEGLGADGQEHKEDTFDVFRQRMMQMYRHKRA 1080
Query: 1081 NK 1082
NK
Sbjct: 1081 NK 1082
>gi|33469964 splicing factor 4 [Homo sapiens]
Length = 645
Score = 80.1 bits (196), Expect = 1e-14
Identities = 39/92 (42%), Positives = 61/92 (66%), Gaps = 4/92 (4%)
Query: 991 RPMSKKKKPKDLDFAQQKLTDKNLGFQMLQKMGWKEGHGLGSLGKGIREPVSVGTPS-EG 1049
+ + + ++P ++ + KLT +N+G+QML KMGWKEG GLGS G+GI+ PV+ GT + +G
Sbjct: 542 KALKEGREPDYSEYKEFKLTVENIGYQMLMKMGWKEGEGLGSEGQGIKNPVNKGTTTVDG 601
Query: 1050 EGLGADGQ---EHKEDTFDVFRQRMMQMYRHK 1078
G G D ++D ++ FR+RMM YR +
Sbjct: 602 AGFGIDRPAELSKEDDEYEAFRKRMMLAYRFR 633
Score = 64.7 bits (156), Expect = 5e-10
Identities = 30/55 (54%), Positives = 41/55 (74%)
Query: 783 KTMETAEKLARFVAQVGPEIEQFSIENSTDNPDLWFLHDQNSSAFKFYRKKVFEL 837
+T + EKLARFVA+ GPE+E+ ++E+ DNP FLHD+NS F +YRKKV E+
Sbjct: 187 ETRKVIEKLARFVAEGGPELEKVAMEDYKDNPAFAFLHDKNSREFLYYRKKVAEI 241
Score = 57.4 bits (137), Expect = 7e-08
Identities = 27/71 (38%), Positives = 44/71 (61%)
Query: 766 SEAPQTSSPCPSADIDMKTMETAEKLARFVAQVGPEIEQFSIENSTDNPDLWFLHDQNSS 825
++ Q +S S D + AEKLARF+A GPE+E +++N+ +N FL++ NS
Sbjct: 245 AQKSQAASQKVSPPEDEEVKNLAEKLARFIADGGPEVETIALQNNRENQAFSFLYEPNSQ 304
Query: 826 AFKFYRKKVFE 836
+K+YR+K+ E
Sbjct: 305 GYKYYRQKLEE 315
Score = 49.3 bits (116), Expect = 2e-05
Identities = 55/232 (23%), Positives = 101/232 (43%), Gaps = 21/232 (9%)
Query: 579 PQRADHRVVGTIDQLVKRVIEGSLSPKERTL--LKEDPAYWFLSDENSLEYKYYKLKLAE 636
P+ A+ R V I++L + V EG ++ + K++PA+ FL D+NS E+ YY+ K+AE
Sbjct: 183 PEGAETRKV--IEKLARFVAEGGPELEKVAMEDYKDNPAFAFLHDKNSREFLYYRKKVAE 240
Query: 637 MQRMSENLRGADQKPTSADCAVRAMLYSRAVRNLKKKLLPWQRRGLLRAQGLRGWKARRA 696
+++ ++ + A QK + + V+NL +KL + G + + R
Sbjct: 241 IRKEAQKSQAASQKVSPPE--------DEEVKNLAEKLARFIADGGPEVETIALQNNREN 292
Query: 697 TTGTQTLLSSGTRLKHHGRQAPGLSQAKPSLPDRNDAAKDCPPDPVGPSPQDPSLEASGP 756
+ + K++ ++ +AK S PDP G + P SG
Sbjct: 293 QAFSFLYEPNSQGYKYYRQKLEEFRKAKAS-----STGSFTAPDP-GLKRKSPPEALSGS 346
Query: 757 SPKPAGVDISEAP-QTSSPCPSADIDMKTMETAEKLARFVAQVGPEIEQFSI 807
P S P T P P+A + T ++ + ++ GPE ++ +
Sbjct: 347 LPPATTCPASSTPAPTIIPAPAAPGKPASAATVKRKRK--SRWGPEEDKVEL 396
>gi|63003897 transcription factor NRF [Homo sapiens]
Length = 690
Score = 54.3 bits (129), Expect = 6e-07
Identities = 26/50 (52%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 1006 QQKLTDKNLGFQMLQKMGWKEGHGLGSLGKGIREPVSVGTPSEGEGLGAD 1055
+Q++ + N+G Q+L+KMGW G GLG G+GIREP+SV + EGLG D
Sbjct: 546 KQQIKEDNIGNQLLRKMGWTGG-GLGKSGEGIREPISVKEQHKREGLGLD 594
>gi|20127479 RNA binding motif protein 10 isoform 1 [Homo sapiens]
Length = 930
Score = 53.1 bits (126), Expect = 1e-06
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 1002 LDFAQQK---LTDKNLGFQMLQKMGWKEGHGLGSLGKGIREPVSVGTPSEGEGLGADGQE 1058
+DF Q L N+G +MLQ MGWKEG GLG +GI P+ T G GLGA G
Sbjct: 846 VDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGARGSS 905
Query: 1059 HKEDTFDVFRQRM 1071
+ + + +++ +
Sbjct: 906 YGVTSTESYKETL 918
>gi|23111018 RNA binding motif protein 10 isoform 2 [Homo sapiens]
Length = 852
Score = 53.1 bits (126), Expect = 1e-06
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 1002 LDFAQQK---LTDKNLGFQMLQKMGWKEGHGLGSLGKGIREPVSVGTPSEGEGLGADGQE 1058
+DF Q L N+G +MLQ MGWKEG GLG +GI P+ T G GLGA G
Sbjct: 768 VDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGARGSS 827
Query: 1059 HKEDTFDVFRQRM 1071
+ + + +++ +
Sbjct: 828 YGVTSTESYKETL 840
>gi|5032031 RNA binding motif protein 5 [Homo sapiens]
Length = 815
Score = 49.7 bits (117), Expect = 2e-05
Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 992 PMSKKKKPKDLDFAQQKLTDK------NLGFQMLQKMGWKEGHGLGSLGKGIREPVSVGT 1045
P K+KK D + K N+G +MLQ MGW+EG GLG +GI P+
Sbjct: 718 PEPKRKKQFDAGTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQV 777
Query: 1046 PSEGEGLGADGQEH 1059
+G GLGA G +
Sbjct: 778 RLKGAGLGAKGSAY 791
>gi|8922313 G patch domain containing 2 [Homo sapiens]
Length = 528
Score = 49.7 bits (117), Expect = 2e-05
Identities = 23/47 (48%), Positives = 29/47 (61%)
Query: 1007 QKLTDKNLGFQMLQKMGWKEGHGLGSLGKGIREPVSVGTPSEGEGLG 1053
Q + + N+G +MLQ MGW G GLG GKGI EP+ +G GLG
Sbjct: 463 QPILENNIGNRMLQNMGWTPGSGLGRDGKGISEPIQAMQRPKGLGLG 509
>gi|39725952 angiogenic factor VG5Q [Homo sapiens]
Length = 714
Score = 49.3 bits (116), Expect = 2e-05
Identities = 23/55 (41%), Positives = 32/55 (58%)
Query: 1008 KLTDKNLGFQMLQKMGWKEGHGLGSLGKGIREPVSVGTPSEGEGLGADGQEHKED 1062
++TD N G +ML+KMGWK+G GLG G G++ P+ + GLG ED
Sbjct: 616 EITDSNKGRKMLEKMGWKKGEGLGKDGGGMKTPIQLQLRRTHAGLGTGKPSSFED 670
>gi|148277064 cut-like homeobox 1 isoform a [Homo sapiens]
Length = 1505
Score = 45.8 bits (107), Expect = 2e-04
Identities = 44/142 (30%), Positives = 59/142 (41%), Gaps = 12/142 (8%)
Query: 859 GSQESPVDLMEGEAEFEDEPPPREAELESPEVMPEEED--EDDEDGGE-EAPAPGGAGKS 915
GS ++ +GEAE E+ P P E P P +D +DD +GG E P P + S
Sbjct: 1348 GSADTEEPKSQGEAEREEVPRPAEQTEPPPSGTPGPDDARDDDHEGGPVEGPGPLPSPAS 1407
Query: 916 EGSTPADGLPGEAAEDDLAGAPALSQASSGTCFPRKRISSKSLKVGMIPAPKRVCLIQEP 975
+T A P +AA A AP A+ + P SS S AP+R +Q
Sbjct: 1408 ATATAAPAAPEDAA-TSAAAAPGEGPAAPSSAPPPSNSSSSS-------APRRPSSLQS- 1458
Query: 976 KVHEPVRIAYDRPRGRPMSKKK 997
P R P+ KKK
Sbjct: 1459 LFGLPEAAGARDSRDNPLRKKK 1480
>gi|167900474 coiled-coil domain containing 75 [Homo sapiens]
Length = 259
Score = 44.7 bits (104), Expect = 5e-04
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 996 KKKPKDLDFAQQKLTD---------KNLGFQMLQKMGWKEGHGLGSLGKGIREPV--SVG 1044
K + K L +Q+ D +N GF +LQKMG+K G LG G GI EP+ ++
Sbjct: 45 KNRQKSLKEEEQERRDIGLKNALGCENKGFALLQKMGYKSGQALGKSGGGIVEPIPLNIK 104
Query: 1045 TPSEGEGLGADGQEHKEDTFDVFRQRM 1071
T G G A + E+ + +R+++
Sbjct: 105 TGKSGIGHEASLKRKAEEKLESYRKKI 131
>gi|226371735 iroquois homeobox 3 [Homo sapiens]
Length = 501
Score = 43.9 bits (102), Expect = 8e-04
Identities = 49/179 (27%), Positives = 71/179 (39%), Gaps = 18/179 (10%)
Query: 844 TSSPHNLHTGGGDTTGSQESPVDLMEGEAEFEDEPPPREAELESPEVMPEEED------- 896
T +P + G+ GS+ E + E ++E RE ELE E+ EEED
Sbjct: 192 TWAPRSRTDEEGNAYGSERE-----EEDEEEDEEDGKRELELEEEELGGEEEDTGGEGLA 246
Query: 897 EDDEDGGEEAPAPGGAGKSEGSTPADGLPGEAAED-DLAGAPALSQASSGTCFPRKRISS 955
+DDED + GA + P L G A D DL P +S + + +
Sbjct: 247 DDDEDEEIDLENLDGA----ATEPELSLAGAARRDGDLGLGPISDSKNSDSEDSSEGLED 302
Query: 956 KSLKV-GMIPAPKRVCLIQEPKVHEPVRIAYDRPRGRPMSKKKKPKDLDFAQQKLTDKN 1013
+ L V + PAP V + PV + P P S +KPK A+ + N
Sbjct: 303 RPLPVLSLAPAPPPVAVASPSLPSPPVSLDPCAPAPAPASALQKPKIWSLAETATSPDN 361
>gi|5453880 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member A [Homo sapiens]
Length = 249
Score = 42.0 bits (97), Expect = 0.003
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Query: 830 YRKKVFELCPSICFTSSPHNLHTGGGDTTGSQESPVDLMEGEAEFEDEPPPREAELESPE 889
YR+ VF+L P + + D+ E V+ ++ E E EDE E E +
Sbjct: 131 YRENVFKLLPQLTYLDGYDRDDKEAPDSDA--EGYVEGLDDEEEDEDE----EEYDEDAQ 184
Query: 890 VMPEEEDEDDEDGGEEAPAPGGAGKSEGSTPADGLPGEAAEDDL 933
V+ +EEDED+E+ GEE G + E + E E++L
Sbjct: 185 VVEDEEDEDEEEEGEEEDVSGEEEEDEEGYNDGEVDDEEDEEEL 228
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 42.0 bits (97), Expect = 0.003
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 1014 LGFQMLQKMGWKEGHGLGSLGKGIREPVSVGTPSEGEGLGADGQ 1057
+G +++KMGW+EG GLG +G +EP+ V ++ +GL A G+
Sbjct: 2308 MGAVLMRKMGWREGEGLGKNKEGNKEPILVDFKTDRKGLVAVGE 2351
>gi|148277037 AP2 associated kinase 1 [Homo sapiens]
Length = 961
Score = 41.6 bits (96), Expect = 0.004
Identities = 35/107 (32%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Query: 700 TQTLLSSGTRLKHHGRQA-PGLSQAKPSLPDRNDAAKDCPPDPVGPSPQDPSLEASGPSP 758
T+T ++ R K Q PG+ +P+L R A PP G S Q P L AS P P
Sbjct: 360 TETSIAPRQRPKAGQTQPNPGILPIQPALTPRKRATVQPPPQAAGSSNQ-PGLLASVPQP 418
Query: 759 KPAGVDISEAPQTSSPCPSA-DIDMKTMETAEKLARFVAQVGPEIEQ 804
KP PQT + P A +T T + AQ P+ +Q
Sbjct: 419 KPQAPPSQPLPQTQAKQPQAPPTPQQTPSTQAQGLPAQAQATPQHQQ 465
>gi|166795264 AE binding protein 2 isoform b [Homo sapiens]
Length = 517
Score = 41.6 bits (96), Expect = 0.004
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Query: 853 GGGDTTGSQESPVDLMEGEAEFEDEPPPREAELESPEVMPEEEDEDDEDGGEEAPAPGGA 912
GGG G GEAE EP P A + EE+DE++ED E + + GG
Sbjct: 69 GGGGGVGG---------GEAETMSEPSPESASQAGEDEDEEEDDEEEED--ESSSSGGGE 117
Query: 913 GKSEGSTPADGLPGEAAEDDLAGAPALSQASSG 945
+S + G ++++ + +P + +SSG
Sbjct: 118 EESSAESLVGSSGGSSSDETRSLSPGAASSSSG 150
>gi|166795262 AE binding protein 2 isoform a [Homo sapiens]
Length = 503
Score = 41.6 bits (96), Expect = 0.004
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Query: 853 GGGDTTGSQESPVDLMEGEAEFEDEPPPREAELESPEVMPEEEDEDDEDGGEEAPAPGGA 912
GGG G GEAE EP P A + EE+DE++ED E + + GG
Sbjct: 69 GGGGGVGG---------GEAETMSEPSPESASQAGEDEDEEEDDEEEED--ESSSSGGGE 117
Query: 913 GKSEGSTPADGLPGEAAEDDLAGAPALSQASSG 945
+S + G ++++ + +P + +SSG
Sbjct: 118 EESSAESLVGSSGGSSSDETRSLSPGAASSSSG 150
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 41.2 bits (95), Expect = 0.005
Identities = 46/215 (21%), Positives = 76/215 (35%), Gaps = 38/215 (17%)
Query: 723 AKPSLPDRNDAAKDCPPDPVGPSPQDPSLEASGPSPKPAGVDISEAPQTSSPCPSADIDM 782
++P+ D A + PP P P +P G P P ++ +P+ +SP S
Sbjct: 418 SRPTDQDYRPPASEAPP----PEPPEPGGGGGGGGPSPEREEVRTSPRPASPARSGSPAP 473
Query: 783 KTMETAEKLARFVAQVGPEIEQFSIENSTDNPDLWFLHDQNSSAFKFYRKKVFELCPSIC 842
+T E F+ +S D+ L +Q S F F
Sbjct: 474 ETTN--------------ESVPFAQHSSLDSRIEMLLKEQRSK-FSF------------- 505
Query: 843 FTSSPHNLHTGGGDTTGSQESPVDLMEGEAEFEDEPPPREAELESPEVMPEEEDEDDEDG 902
S G++++ ++ G PPP A E +V P E
Sbjct: 506 LASDTEEEEENSSMVLGARDTGSEVPSGSGHGPCTPPPAPANFE--DVAPTGSGEP---- 559
Query: 903 GEEAPAPGGAGKSEGSTPADGLPGEAAEDDLAGAP 937
G +P G+++ S + G E ++DD G+P
Sbjct: 560 GATRESPKANGQNQASPCSSGDDMEISDDDRGGSP 594
>gi|49087132 sal-like 2 [Homo sapiens]
Length = 1007
Score = 41.2 bits (95), Expect = 0.005
Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 3/127 (2%)
Query: 853 GGGDTTGSQESPVDLMEGEAEFEDEPPPREAELESPEVMPEEEDEDDEDGGEEAPAPGGA 912
G GS++S V + + + P E EL E EEEDE++E+ + + G
Sbjct: 730 GAAQENGSEQSTVSGAGSFPQQQSQQPSPEEELSEEE---EEEDEEEEEDVTDEDSLAGR 786
Query: 913 GKSEGSTPADGLPGEAAEDDLAGAPALSQASSGTCFPRKRISSKSLKVGMIPAPKRVCLI 972
G G A + G++ E A + A++ T + K+ + +P P +
Sbjct: 787 GSESGGEKAISVRGDSEEASGAEEEVGTVAAAATAGKEMDSNEKTTQQSSLPPPPPPDSL 846
Query: 973 QEPKVHE 979
+P+ E
Sbjct: 847 DQPQPME 853
>gi|7657335 misshapen/NIK-related kinase isoform 1 [Homo sapiens]
Length = 1295
Score = 41.2 bits (95), Expect = 0.005
Identities = 63/246 (25%), Positives = 89/246 (36%), Gaps = 29/246 (11%)
Query: 701 QTLLSSGTRLKHHGRQAPGLSQAKPSLPDRNDAAKDCP--PDPVGPSP------------ 746
++L++ LK + P SQ+ P RN AA PDP P+P
Sbjct: 580 KSLVAHRVPLKPYAAPVPR-SQSLQDQPTRNLAAFPASHDPDPAIPAPTATPSARGAVIR 638
Query: 747 --QDPSLEASGPSPKPAG---VDISEAPQTSSPCPSADIDMKTMETA-EKLARFVAQVGP 800
DP+ E GPSP P D P+ S + T + A+ V P
Sbjct: 639 QNSDPTSEGPGPSPNPPAWVRPDNEAPPKVPQRTSSIATALNTSGAGGSRPAQAVRASNP 698
Query: 801 EIEQFSIENSTDNPDLWFLHDQNSSAFKFYRKKV-FELCPSICFTSSPHNLHTGGGDTTG 859
++ + + L H A R +V P SP N D
Sbjct: 699 DLRRSDPGWERSDSVLPASHGHLPQAGSLERNRVGVSSKPDSSPVLSPGN-KAKPDDHRS 757
Query: 860 SQESPVD-LMEGEAEFEDEP-PPREAELESPEVMPEEEDEDDEDGGEEAPAPGG----AG 913
P D ++ E ++ P PP++A S E EDDE+ GE PA G G
Sbjct: 758 RPGRPADFVLLKERTLDEAPRPPKKAMDYSSSSEEVESSEDDEEEGEGGPAEGSRDTPGG 817
Query: 914 KSEGST 919
+S+G T
Sbjct: 818 RSDGDT 823
>gi|33946282 hypothetical protein LOC25962 isoform 1 [Homo sapiens]
Length = 1812
Score = 40.4 bits (93), Expect = 0.009
Identities = 58/267 (21%), Positives = 92/267 (34%), Gaps = 56/267 (20%)
Query: 688 LRGWKARRATTGTQTLLSSGTRLKHHGRQAPGLSQAKPSLPDRNDAAKDCPPDPVGPSPQ 747
LRGW T + S R+ H R +P P P + K P G +
Sbjct: 113 LRGWY----NCLTLAIYGSVDRVISHDRDSPPPPPPPPPPPQPQPSLKRNPKHADGE--K 166
Query: 748 DPSLEASGPSPKPAGVDISEAPQTSSPCPSADIDMKTMETAEKLARFVAQVGPEIEQFSI 807
+ S P P+P G P+T P D D + P S
Sbjct: 167 EDQFNGSPPRPQPRG------PRTPPGPPPPDDD---------------EDDPVPLPVSG 205
Query: 808 ENSTDNPDLWFLHDQNSSAFKFYRKKVFELCPSICFTSSPHNLHTGGGDTTGSQESPVDL 867
+ D P +R+ FE + ++ G+ Q+ +
Sbjct: 206 DKEEDAP---------------HREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQEEGEE 250
Query: 868 MEGEAEFEDEPPPREAELESPEVMPEEEDEDDEDGGEE-APAPGGAGKSEGSTPADGLPG 926
E + + E+E E + + + +PEEE+ED+E+ GEE G G + S+ DG+
Sbjct: 251 DEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGDDGYEQISSDEDGIAD 310
Query: 927 -------------EAAEDDLAGAPALS 940
E +DLA P ++
Sbjct: 311 LERETFKYPNFDVEYTAEDLASVPPMT 337
>gi|33946280 hypothetical protein LOC25962 isoform 2 [Homo sapiens]
Length = 1147
Score = 40.4 bits (93), Expect = 0.009
Identities = 58/267 (21%), Positives = 92/267 (34%), Gaps = 56/267 (20%)
Query: 688 LRGWKARRATTGTQTLLSSGTRLKHHGRQAPGLSQAKPSLPDRNDAAKDCPPDPVGPSPQ 747
LRGW T + S R+ H R +P P P + K P G +
Sbjct: 113 LRGWY----NCLTLAIYGSVDRVISHDRDSPPPPPPPPPPPQPQPSLKRNPKHADGE--K 166
Query: 748 DPSLEASGPSPKPAGVDISEAPQTSSPCPSADIDMKTMETAEKLARFVAQVGPEIEQFSI 807
+ S P P+P G P+T P D D + P S
Sbjct: 167 EDQFNGSPPRPQPRG------PRTPPGPPPPDDD---------------EDDPVPLPVSG 205
Query: 808 ENSTDNPDLWFLHDQNSSAFKFYRKKVFELCPSICFTSSPHNLHTGGGDTTGSQESPVDL 867
+ D P +R+ FE + ++ G+ Q+ +
Sbjct: 206 DKEEDAP---------------HREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQEEGEE 250
Query: 868 MEGEAEFEDEPPPREAELESPEVMPEEEDEDDEDGGEE-APAPGGAGKSEGSTPADGLPG 926
E + + E+E E + + + +PEEE+ED+E+ GEE G G + S+ DG+
Sbjct: 251 DEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGDDGYEQISSDEDGIAD 310
Query: 927 -------------EAAEDDLAGAPALS 940
E +DLA P ++
Sbjct: 311 LERETFKYPNFDVEYTAEDLASVPPMT 337
>gi|119226260 calcium homeostasis endoplasmic reticulum protein
[Homo sapiens]
Length = 916
Score = 40.4 bits (93), Expect = 0.009
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 774 PCPSADIDMKTMETAEKLARFVAQVGPEIEQFSIENSTDNPDLWFLHDQNSSAFKFYR-K 832
P P D +++ + +KLA+FVA+ GPE E+ ++E DNP FL + +Y+ K
Sbjct: 4 PLPPDDQELRNV--IDKLAQFVARNGPEFEKMTMEKQKDNPKFSFLF--GGEFYSYYKCK 59
Query: 833 KVFELCPSICFTSSP 847
E IC +P
Sbjct: 60 LALEQQQLICKQQTP 74
Score = 39.7 bits (91), Expect = 0.016
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 1008 KLTDKNLGFQMLQKMGWKEGHGLGSLGKGIREPVSVG 1044
+L ++N G QML KMGW GLG+ +GI++P+ G
Sbjct: 838 RLGEENKGHQMLVKMGWSGSGGLGAKEQGIQDPIKGG 874
>gi|148747556 PIN2-interacting protein 1 [Homo sapiens]
Length = 328
Score = 40.0 bits (92), Expect = 0.012
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 1011 DKNLGFQMLQKMGWKEGHGLGSLGKGIREPVSVGTPSEGEGLGA 1054
D G +ML+KMGW +G GLG+ +G + + V + GLGA
Sbjct: 26 DSKFGQRMLEKMGWSKGKGLGAQEQGATDHIKVQVKNNHLGLGA 69
>gi|56788356 tuftelin interacting protein 11 [Homo sapiens]
Length = 837
Score = 40.0 bits (92), Expect = 0.012
Identities = 21/66 (31%), Positives = 31/66 (46%)
Query: 1002 LDFAQQKLTDKNLGFQMLQKMGWKEGHGLGSLGKGIREPVSVGTPSEGEGLGADGQEHKE 1061
+DF + K +G ++LQKMG+ G GLG +GI P+ +GA G E
Sbjct: 140 MDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVGAYGSERTT 199
Query: 1062 DTFDVF 1067
+ F
Sbjct: 200 QSMQDF 205
>gi|8393259 tuftelin interacting protein 11 [Homo sapiens]
Length = 837
Score = 40.0 bits (92), Expect = 0.012
Identities = 21/66 (31%), Positives = 31/66 (46%)
Query: 1002 LDFAQQKLTDKNLGFQMLQKMGWKEGHGLGSLGKGIREPVSVGTPSEGEGLGADGQEHKE 1061
+DF + K +G ++LQKMG+ G GLG +GI P+ +GA G E
Sbjct: 140 MDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVGAYGSERTT 199
Query: 1062 DTFDVF 1067
+ F
Sbjct: 200 QSMQDF 205
>gi|74325776 MACRO domain containing 2 isoform 2 [Homo sapiens]
Length = 213
Score = 40.0 bits (92), Expect = 0.012
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 9/76 (11%)
Query: 858 TGSQESPVDLMEGEAEFEDEPPPREAELESPEVMPEEEDEDDEDGGEEAPA---PGGAGK 914
T SQ S ++ E + ED +E PEV+P ED+++++G E+AP P GK
Sbjct: 108 TESQSSYMETEELSSNQEDA-----VIVEQPEVIPLTEDQEEKEG-EKAPGEDTPRMPGK 161
Query: 915 SEGSTPADGLPGEAAE 930
SEGS+ + PG E
Sbjct: 162 SEGSSDLENTPGPDVE 177
>gi|53831995 splicing factor 3a, subunit 1, 120kDa isoform 2 [Homo
sapiens]
Length = 728
Score = 40.0 bits (92), Expect = 0.012
Identities = 34/105 (32%), Positives = 44/105 (41%), Gaps = 21/105 (20%)
Query: 738 PPDPVGPSPQDP------SLEASGPSPKPAGVDISEAPQTSSPCPSADIDMKTMETAEKL 791
PP PV P+ P S E S PS G+ I P+ + +K
Sbjct: 11 PPPPVPTEPKQPTEEEASSKEDSAPSKPVVGI-IYPPPEVRN-------------IVDKT 56
Query: 792 ARFVAQVGPEIEQFSIENSTDNPDLWFLHDQNSSAFKFYRKKVFE 836
A FVA+ GPE E +N +NP FL + N +YR KV E
Sbjct: 57 ASFVARNGPEFEARIRQNEINNPKFNFL-NPNDPYHAYYRHKVSE 100
>gi|5032087 splicing factor 3a, subunit 1, 120kDa isoform 1 [Homo
sapiens]
Length = 793
Score = 40.0 bits (92), Expect = 0.012
Identities = 34/105 (32%), Positives = 44/105 (41%), Gaps = 21/105 (20%)
Query: 738 PPDPVGPSPQDP------SLEASGPSPKPAGVDISEAPQTSSPCPSADIDMKTMETAEKL 791
PP PV P+ P S E S PS G+ I P+ + +K
Sbjct: 11 PPPPVPTEPKQPTEEEASSKEDSAPSKPVVGI-IYPPPEVRN-------------IVDKT 56
Query: 792 ARFVAQVGPEIEQFSIENSTDNPDLWFLHDQNSSAFKFYRKKVFE 836
A FVA+ GPE E +N +NP FL + N +YR KV E
Sbjct: 57 ASFVARNGPEFEARIRQNEINNPKFNFL-NPNDPYHAYYRHKVSE 100
>gi|117968621 MACRO domain containing 2 isoform 1 [Homo sapiens]
Length = 425
Score = 39.7 bits (91), Expect = 0.016
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Query: 858 TGSQESPVDLMEGEAEFEDEPPPREAELESPEVMPEEEDEDDEDGGEEAPA---PGGAGK 914
T SQ S ++ E + ED +E PEV+P ED+++++G E+AP P GK
Sbjct: 343 TESQSSYMETEELSSNQEDA-----VIVEQPEVIPLTEDQEEKEG-EKAPGEDTPRMPGK 396
Query: 915 SEGSTPADGLPGEAA 929
SEGS+ + PG A
Sbjct: 397 SEGSSDLENTPGPDA 411
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.133 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,067,227
Number of Sequences: 37866
Number of extensions: 2519467
Number of successful extensions: 16159
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 379
Number of HSP's that attempted gapping in prelim test: 13149
Number of HSP's gapped (non-prelim): 2550
length of query: 1082
length of database: 18,247,518
effective HSP length: 113
effective length of query: 969
effective length of database: 13,968,660
effective search space: 13535631540
effective search space used: 13535631540
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.