Guide to the Human Genome
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Name: MINK1 Sequence: fasta or formatted (1295aa) NCBI GI: 7657335
Description:

misshapen/NIK-related kinase isoform 1

Referenced in:

MAP Kinase Pathways

Other entries for this name:
alt prot [1303aa] misshapen/NIK-related kinase isoform 2
alt prot [1332aa] misshapen/NIK-related kinase isoform 3
alt prot [1312aa] misshapen/NIK-related kinase isoform 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         76           2
 C cysteine            0.9         12           1
 D aspartate           5.6         73           2
 E glutamate           8.0        104           4
 F phenylalanine       2.2         28           2
 G glycine             7.4         96           3
 H histidine           2.6         34           2
 I isoleucine          4.4         57           2
 K lysine              5.8         75           2
 L leucine             7.7        100           2
 M methionine          2.2         28           1
 N asparagine          3.6         47           1
 P proline             7.7        100           3
 Q glutamine           6.6         86           8
 R arginine            7.6         99           3
 S serine              7.3         94           4
 T threonine           4.2         55           2
 V valine              6.0         78           2
 W tryptophan          1.1         14           1
 Y tyrosine            3.0         39           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   misshapen/NIK-related kinase isoform 1 
MINK1                 0.997   misshapen/NIK-related kinase isoform 2 
MINK1                 0.993   misshapen/NIK-related kinase isoform 3 
MINK1                 0.973   misshapen/NIK-related kinase isoform 4 
TNIK                  0.631   TRAF2 and NCK interacting kinase isoform 4 
TNIK                  0.629   TRAF2 and NCK interacting kinase isoform 3 
TNIK                  0.625   TRAF2 and NCK interacting kinase isoform 2 
TNIK                  0.623   TRAF2 and NCK interacting kinase isoform 1 
TNIK                  0.599   TRAF2 and NCK interacting kinase isoform 8 
TNIK                  0.597   TRAF2 and NCK interacting kinase isoform 7 
TNIK                  0.597   TRAF2 and NCK interacting kinase isoform 6 
TNIK                  0.594   TRAF2 and NCK interacting kinase isoform 5 
MAP4K4                0.585   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.554   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.294   mitogen-activated protein kinase kinase kinase kinas...
NRK                   0.146   Nik related kinase 
MYO3A                 0.109   myosin IIIA 
MYO3B                 0.102   myosin IIIB isoform 1 
MYO3B                 0.102   myosin IIIB isoform 2 
STK4                  0.092   serine/threonine kinase 4 
MAP4K3                0.091   mitogen-activated protein kinase kinase kinase kinas...
MAP4K5                0.089   mitogen-activated protein kinase kinase kinase kinas...
MAP4K5                0.089   mitogen-activated protein kinase kinase kinase kinas...
STK25                 0.089   serine/threonine kinase 25 
STK3                  0.089   serine/threonine kinase 3 
MST4                  0.087   serine/threonine protein kinase MST4 isoform 1 [Homo...
STK24                 0.086   serine/threonine kinase 24 isoform b 
STK24                 0.086   serine/threonine kinase 24 isoform a 
MAP4K2                0.084   mitogen-activated protein kinase kinase kinase kinas...
MAP4K1                0.083   mitogen-activated protein kinase kinase kinase kina...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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