COPS2 13911

Name: COPS2	Sequence: fasta or formatted (450aa)		NCBI GI: 219842262
Description: COP9 constitutive photomorphogenic homolog subunit 2 isoform 2		Referenced in: Proteasome Signalosome Thyroid and Thyroid Hormone Receptor
Other entries for this name: alt prot [443aa] COP9 constitutive photomorphogenic homolog subunit 2 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.9 22 2 C cysteine 1.3 6 1 D aspartate 7.3 33 2 E glutamate 8.9 40 2 F phenylalanine 3.6 16 2 G glycine 3.6 16 2 H histidine 2.2 10 1 I isoleucine 6.7 30 1 K lysine 9.1 41 2 L leucine 12.0 54 2 M methionine 3.1 14 2 N asparagine 6.7 30 2 P proline 2.7 12 1 Q glutamine 5.3 24 1 R arginine 3.8 17 2 S serine 6.0 27 2 T threonine 4.9 22 2 V valine 2.9 13 2 W tryptophan 0.7 3 1 Y tyrosine 4.4 20 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 COP9 constitutive photomorphogenic homolog subunit ... COPS2 0.974 COP9 constitutive photomorphogenic homolog subunit 2 ... PSMD11 0.101 proteasome 26S non-ATPase subunit 11 GPS1 0.024 G protein pathway suppressor 1 isoform 2 GPS1 0.024 G protein pathway suppressor 1 isoform 1 PSMD12 0.018 proteasome 26S non-ATPase subunit 12 isoform 1 PSMD12 0.018 proteasome 26S non-ATPase subunit 12 isoform 2 [Homo... DYNC1H1 0.015 cytoplasmic dynein 1 heavy chain 1 MYH11 0.014 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.014 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.014 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.014 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... VAV3 0.013 vav 3 guanine nucleotide exchange factor isoform 1 ... LMOD3 0.011 leiomodin 3 (fetal) CCDC46 0.010 coiled-coil domain containing 46 isoform a EIF3E 0.010 eukaryotic translation initiation factor 3, subunit 6... EIF3M 0.009 eukaryotic translation initiation factor 3, subunit ... MYH15 0.009 myosin, heavy polypeptide 15 COPS7B 0.009 COP9 constitutive photomorphogenic homolog subunit 7... PSMD6 0.009 proteasome (prosome, macropain) 26S subunit, non-ATPa... RGPD4 0.008 RANBP2-like and GRIP domain containing 4 TRIP11 0.008 thyroid hormone receptor interactor 11 CIT 0.008 citron APLF 0.008 aprataxin and PNKP like factor RPGRIP1L 0.008 RPGRIP1-like isoform b RPGRIP1L 0.008 RPGRIP1-like isoform a CLTCL1 0.007 clathrin, heavy polypeptide-like 1 isoform 2 CLTCL1 0.007 clathrin, heavy polypeptide-like 1 isoform 1 TRIM13 0.007 ret finger protein 2 isoform 2 TRIM13 0.007 ret finger protein 2 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.