PSMD6 35852

Name: PSMD6	Sequence: fasta or formatted (389aa)		NCBI GI: 7661914
Description: proteasome (prosome, macropain) 26S subunit, non-ATPase, 6		Referenced in: Proteasome Signalosome
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.5 29 2 C cysteine 1.3 5 1 D aspartate 6.9 27 1 E glutamate 9.5 37 3 F phenylalanine 3.9 15 2 G glycine 4.1 16 2 H histidine 1.5 6 1 I isoleucine 4.9 19 1 K lysine 6.7 26 2 L leucine 12.9 50 3 M methionine 3.3 13 2 N asparagine 3.9 15 2 P proline 2.3 9 1 Q glutamine 3.1 12 1 R arginine 7.5 29 2 S serine 4.4 17 1 T threonine 3.6 14 1 V valine 6.2 24 2 W tryptophan 1.0 4 1 Y tyrosine 5.7 22 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 proteasome (prosome, macropain) 26S subunit, non-ATPa... GPS1 0.100 G protein pathway suppressor 1 isoform 1 GPS1 0.097 G protein pathway suppressor 1 isoform 2 CLIP1 0.012 restin isoform b CLIP1 0.012 restin isoform a AMMECR1 0.012 AMMECR1 protein isoform 2 AMMECR1 0.012 AMMECR1 protein isoform 1 COPS2 0.011 COP9 constitutive photomorphogenic homolog subunit ... COPS2 0.011 COP9 constitutive photomorphogenic homolog subunit 2 ... PSMD12 0.009 proteasome 26S non-ATPase subunit 12 isoform 1 PSMD12 0.009 proteasome 26S non-ATPase subunit 12 isoform 2 [Homo... MYO6 0.008 myosin VI MYH13 0.007 myosin, heavy polypeptide 13, skeletal muscle [Homo... GOLIM4 0.007 golgi integral membrane protein 4 CCDC102A 0.007 coiled-coil domain containing 102A ATP11A 0.007 ATPase, class VI, type 11A isoform b MYH7B 0.007 myosin, heavy polypeptide 7B, cardiac muscle, beta ... ATP11A 0.007 ATPase, class VI, type 11A isoform a TTC25 0.007 tetratricopeptide repeat domain 25 UBR4 0.007 retinoblastoma-associated factor 600 SHROOM2 0.007 apical protein of Xenopus-like PIP4K2A 0.005 phosphatidylinositol-5-phosphate 4-kinase, type II, a... MYH14 0.005 myosin, heavy chain 14 isoform 1 MYH14 0.005 myosin, heavy chain 14 isoform 2 MYH14 0.005 myosin, heavy chain 14 isoform 3 SYNE1 0.005 spectrin repeat containing, nuclear envelope 1 isofo... SYNE1 0.005 spectrin repeat containing, nuclear envelope 1 isof... CGNL1 0.005 cingulin-like 1 PIBF1 0.005 progesterone-induced blocking factor 1 TPM4 0.005 tropomyosin 4 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.