Guide to the Human Genome
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Name: CIT Sequence: fasta or formatted (2027aa) NCBI GI: 32698688
Description:

citron

Referenced in:

Rho and Rac

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5        152           2
 C cysteine            1.8         36           2
 D aspartate           4.5         91           3
 E glutamate          11.0        222           3
 F phenylalanine       3.0         60           2
 G glycine             4.0         82           2
 H histidine           2.6         53           2
 I isoleucine          3.9         79           2
 K lysine              7.5        152           4
 L leucine            11.4        231           2
 M methionine          2.5         50           2
 N asparagine          3.6         72           2
 P proline             4.2         86           3
 Q glutamine           6.4        129           3
 R arginine            6.7        135           3
 S serine              7.8        159           3
 T threonine           4.0         82           2
 V valine              4.8         97           2
 W tryptophan          0.6         13           2
 Y tyrosine            2.3         46           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   citron 
ROCK2                 0.103   Rho-associated, coiled-coil containing protein kinas...
ROCK1                 0.103   Rho-associated, coiled-coil containing protein kinase...
CDC42BPB              0.096   CDC42-binding protein kinase beta 
CDC42BPG              0.096   CDC42 binding protein kinase gamma (DMPK-like) [Hom...
CDC42BPA              0.095   CDC42-binding protein kinase alpha isoform B 
CDC42BPA              0.092   CDC42-binding protein kinase alpha isoform A 
DMPK                  0.078   myotonic dystrophy protein kinase isoform 4 
DMPK                  0.078   myotonic dystrophy protein kinase isoform 3 
DMPK                  0.077   myotonic dystrophy protein kinase isoform 2 
DMPK                  0.074   myotonic dystrophy protein kinase isoform 1 
AKT3                  0.042   AKT3 kinase isoform 2 
AKT3                  0.041   AKT3 kinase isoform 1 
SGK1                  0.041   serum/glucocorticoid regulated kinase 1 isoform 1 [H...
SGK1                  0.041   serum/glucocorticoid regulated kinase 1 isoform 4 [...
SGK1                  0.041   serum/glucocorticoid regulated kinase 1 isoform 3 [...
SGK1                  0.041   serum/glucocorticoid regulated kinase 1 isoform 2 [...
PRKACB                0.041   cAMP-dependent protein kinase catalytic subunit beta...
PRKACB                0.040   cAMP-dependent protein kinase catalytic subunit beta ...
PRKCH                 0.040   protein kinase C, eta 
PRKACG                0.039   protein kinase, cAMP-dependent, catalytic, gamma [Ho...
AKT2                  0.039   AKT2 kinase 
PRKX                  0.039   protein kinase, X-linked 
PRKACA                0.039   cAMP-dependent protein kinase catalytic subunit alph...
PRKACA                0.039   cAMP-dependent protein kinase catalytic subunit alpha...
MAST4                 0.039   microtubule associated serine/threonine kinase fami...
SGK3                  0.038   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
SGK3                  0.038   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
SGK2                  0.038   serum/glucocorticoid regulated kinase 2 isoform alph...
SGK2                  0.038   serum/glucocorticoid regulated kinase 2 isoform beta...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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