RPGRIP1L 10400

Name: RPGRIP1L	Sequence: fasta or formatted (1235aa)		NCBI GI: 189217904
Description: RPGRIP1-like isoform b		Referenced in: Crystallins and Other Eye Proteins Planar Cell Polarity
Other entries for this name: alt prot [1315aa] RPGRIP1-like isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.2 64 2 C cysteine 1.0 12 2 D aspartate 7.0 86 2 E glutamate 10.4 128 2 F phenylalanine 3.1 38 2 G glycine 3.7 46 3 H histidine 2.7 33 1 I isoleucine 5.9 73 2 K lysine 7.4 91 2 L leucine 10.4 129 3 M methionine 2.3 29 1 N asparagine 4.5 55 2 P proline 3.6 45 2 Q glutamine 7.4 91 2 R arginine 5.7 71 2 S serine 6.2 77 2 T threonine 4.9 61 2 V valine 5.3 65 2 W tryptophan 0.3 4 1 Y tyrosine 3.0 37 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 RPGRIP1-like isoform b RPGRIP1L 0.984 RPGRIP1-like isoform a RPGRIP1 0.250 retinitis pigmentosa GTPase regulator interacting p... DSP 0.028 desmoplakin isoform I EEA1 0.028 early endosome antigen 1, 162kD CENPF 0.027 centromere protein F CCDC88C 0.026 DVL-binding protein DAPLE CCDC88A 0.025 coiled-coil domain containing 88A isoform 2 CCDC88A 0.025 coiled-coil domain containing 88A isoform 1 GOLGB1 0.025 golgi autoantigen, golgin subfamily b, macrogolgin ... LOC100133758 0.025 PREDICTED: hypothetical protein, partial ERC1 0.024 RAB6-interacting protein 2 isoform epsilon MYH8 0.024 myosin, heavy chain 8, skeletal muscle, perinatal [... ERC2 0.024 cytomatrix protein p110 MYH11 0.023 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.023 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.023 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.023 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... CGNL1 0.023 cingulin-like 1 ERC1 0.023 RAB6-interacting protein 2 isoform delta MYH9 0.023 myosin, heavy polypeptide 9, non-muscle EVPL 0.023 envoplakin CEP250 0.022 centrosomal protein 2 ROCK1 0.022 Rho-associated, coiled-coil containing protein kinase... AKAP9 0.022 A-kinase anchor protein 9 isoform 2 MYH14 0.022 myosin, heavy chain 14 isoform 1 MYH14 0.022 myosin, heavy chain 14 isoform 2 MYH14 0.022 myosin, heavy chain 14 isoform 3 MYH10 0.022 myosin, heavy polypeptide 10, non-muscle GOLGA4 0.022 golgi autoantigen, golgin subfamily a, 4 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.