PSMD11 24867

Name: PSMD11	Sequence: fasta or formatted (422aa)		NCBI GI: 28872725
Description: proteasome 26S non-ATPase subunit 11		Referenced in: Proteasome Signalosome
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.1 47 4 C cysteine 1.2 5 1 D aspartate 5.9 25 2 E glutamate 8.3 35 2 F phenylalanine 2.6 11 1 G glycine 3.1 13 2 H histidine 1.7 7 1 I isoleucine 5.9 25 2 K lysine 8.3 35 2 L leucine 14.5 61 2 M methionine 1.9 8 1 N asparagine 2.4 10 1 P proline 2.4 10 2 Q glutamine 5.0 21 1 R arginine 5.0 21 1 S serine 7.3 31 2 T threonine 4.5 19 2 V valine 5.0 21 2 W tryptophan 0.5 2 1 Y tyrosine 3.6 15 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 proteasome 26S non-ATPase subunit 11 COPS2 0.114 COP9 constitutive photomorphogenic homolog subunit ... COPS2 0.114 COP9 constitutive photomorphogenic homolog subunit 2 ... COPS4 0.018 COP9 signalosome subunit 4 GPS1 0.018 G protein pathway suppressor 1 isoform 2 GPS1 0.018 G protein pathway suppressor 1 isoform 1 FMNL2 0.011 formin-like 2 PCNT 0.010 pericentrin LRRC45 0.010 leucine rich repeat containing 45 TOMM70A 0.010 translocase of outer mitochondrial membrane 70 homol... CIT 0.009 citron TMEM57 0.009 transmembrane protein 57 DHTKD1 0.009 dehydrogenase E1 and transketolase domain containing... EEF1D 0.008 eukaryotic translation elongation factor 1 delta is... EEF1D 0.008 eukaryotic translation elongation factor 1 delta is... EEF1D 0.008 eukaryotic translation elongation factor 1 delta is... EEF1D 0.008 eukaryotic translation elongation factor 1 delta is... EEF1D 0.008 eukaryotic translation elongation factor 1 delta iso... EEF1D 0.008 eukaryotic translation elongation factor 1 delta iso... EEF1D 0.008 eukaryotic translation elongation factor 1 delta is... PSMD3 0.008 proteasome 26S non-ATPase subunit 3 LOC729920 0.006 notch1-induced protein isoform a LOC729920 0.006 notch1-induced protein isoform b AKAP9 0.006 A-kinase anchor protein 9 isoform 2 AKAP9 0.006 A-kinase anchor protein 9 isoform 3 USP42 0.006 ubiquitin specific peptidase 42 DNAJC7 0.006 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform... DNAJC7 0.006 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform... EEF1B2 0.006 eukaryotic translation elongation factor 1 beta 2 [H... EEF1B2 0.006 eukaryotic translation elongation factor 1 beta 2 [Ho... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.