ZC3H8 13725

Name: ZC3H8	Sequence: fasta or formatted (291aa)		NCBI GI: 217416362
Description: zinc finger CCCH-type containing 8		Referenced in: Zinc Finger Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.5 16 2 C cysteine 4.1 12 1 D aspartate 5.8 17 2 E glutamate 10.7 31 2 F phenylalanine 3.4 10 1 G glycine 5.2 15 1 H histidine 3.1 9 1 I isoleucine 3.8 11 1 K lysine 15.1 44 3 L leucine 5.5 16 2 M methionine 1.4 4 1 N asparagine 4.8 14 1 P proline 4.5 13 2 Q glutamine 6.9 20 2 R arginine 3.4 10 1 S serine 6.2 18 2 T threonine 4.5 13 1 V valine 2.1 6 1 W tryptophan 0.3 1 1 Y tyrosine 3.8 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 zinc finger CCCH-type containing 8 ZC3H6 0.398 zinc finger CCCH-type domain containing 6 ZC3H4 0.203 zinc finger CCCH-type containing 4 MKRN2 0.053 makorin ring finger protein 2 CPSF4 0.053 cleavage and polyadenylation specific factor 4, 30k... CPSF4 0.053 cleavage and polyadenylation specific factor 4, 30kDa... MKRN1 0.050 makorin ring finger protein 1 isoform 2 MKRN1 0.050 makorin ring finger protein 1 isoform 1 CPSF4L 0.046 cleavage and polyadenylation specific factor 4-like... BRD4 0.038 bromodomain-containing protein 4 isoform short BRD4 0.038 bromodomain-containing protein 4 isoform long ZC3H3 0.038 zinc finger CCCH-type containing 3 ZC3H15 0.036 erythropoietin 4 immediate early response FAM133A 0.036 hypothetical protein LOC286499 DDX21 0.031 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 ZFP36 0.027 zinc finger protein 36, C3H type, homolog PPIG 0.027 peptidylprolyl isomerase G DDX23 0.027 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 UNK 0.027 zinc finger CCCH-type domain containing 5 ZC3H11A 0.026 zinc finger CCCH-type containing 11A ZC3H18 0.024 zinc finger CCCH-type containing 18 ZFP36L1 0.022 butyrate response factor 1 ZC3H14 0.022 zinc finger CCCH-type containing 14 isoform 5 [Homo... ZC3H14 0.022 zinc finger CCCH-type containing 14 isoform 1 ZC3H14 0.022 zinc finger CCCH-type containing 14 isoform 3 ZC3H14 0.022 zinc finger CCCH-type containing 14 isoform 4 RTF1 0.022 Paf1/RNA polymerase II complex component ZC3H14 0.021 zinc finger CCCH-type containing 14 isoform 6 [Homo... KDM5A 0.021 retinoblastoma binding protein 2 isoform 1 KDM5A 0.021 retinoblastoma binding protein 2 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.