Guide to the Human Genome
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Name: ZC3H14 Sequence: fasta or formatted (730aa) NCBI GI: 231570186
Description:

zinc finger CCCH-type containing 14 isoform 6

Referenced in:

Nucleus and Nucleolus

Other entries for this name:
alt prot [735aa] zinc finger CCCH-type containing 14 isoform 5
alt prot [736aa] zinc finger CCCH-type containing 14 isoform 1
alt prot [579aa] zinc finger CCCH-type containing 14 isoform 2
alt prot [571aa] zinc finger CCCH-type containing 14 isoform 3
alt prot [306aa] zinc finger CCCH-type containing 14 isoform 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         38           2
 C cysteine            2.3         17           1
 D aspartate           5.5         40           3
 E glutamate           7.8         57           5
 F phenylalanine       2.9         21           2
 G glycine             3.3         24           1
 H histidine           2.3         17           2
 I isoleucine          3.6         26           1
 K lysine              7.3         53           2
 L leucine             7.5         55           2
 M methionine          2.6         19           1
 N asparagine          4.2         31           2
 P proline             9.0         66           2
 Q glutamine           5.5         40           4
 R arginine            5.9         43           2
 S serine             10.0         73           3
 T threonine           5.8         42           2
 V valine              6.3         46           3
 W tryptophan          0.5          4           1
 Y tyrosine            2.5         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger CCCH-type containing 14 isoform 6 [Homo... 
ZC3H14                0.996   zinc finger CCCH-type containing 14 isoform 5 [Homo...
ZC3H14                0.992   zinc finger CCCH-type containing 14 isoform 1 
ZC3H14                0.557   zinc finger CCCH-type containing 14 isoform 2 
ZC3H14                0.545   zinc finger CCCH-type containing 14 isoform 3 
ZC3H14                0.227   zinc finger CCCH-type containing 14 isoform 4 
CPSF4                 0.016   cleavage and polyadenylation specific factor 4, 30k...
CPSF4                 0.016   cleavage and polyadenylation specific factor 4, 30kDa...
ZC3H3                 0.010   zinc finger CCCH-type containing 3 
NEFM                  0.010   neurofilament, medium polypeptide 150kDa isoform 1 ...
NEFM                  0.010   neurofilament, medium polypeptide 150kDa isoform 2 ...
SF3B2                 0.010   splicing factor 3B subunit 2 
NOLC1                 0.008   nucleolar and coiled-body phosphoprotein 1 
ZC3H8                 0.008   zinc finger CCCH-type containing 8 
FAM71E2               0.008   hypothetical protein LOC284418 
ABI3BP                0.008   ABI gene family, member 3 (NESH) binding protein [Ho...
CPSF4L                0.008   cleavage and polyadenylation specific factor 4-like...
RTN4                  0.008   reticulon 4 isoform A 
LOC100290485          0.008   PREDICTED: hypothetical protein XP_002346633 
RNF8                  0.008   ring finger protein 8 isoform 2 
RNF8                  0.008   ring finger protein 8 isoform 1 
VWDE                  0.008   von Willebrand factor D and EGF domains 
LOC642622             0.008   PREDICTED: similar to hCG1798126 
LOC642622             0.008   PREDICTED: similar to hCG1798126, partial 
LOC642622             0.008   PREDICTED: similar to hCG1798126 
TRDN                  0.008   triadin 
AMPH                  0.007   amphiphysin isoform 2 
AMPH                  0.007   amphiphysin isoform 1 
ZC3H6                 0.007   zinc finger CCCH-type domain containing 6 
FGD6                  0.007   FYVE, RhoGEF and PH domain containing 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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