BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|21281679 T-cell activation protein phosphatase 2C [Homo sapiens] (304 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|21281679 T-cell activation protein phosphatase 2C [Homo sapiens] 617 e-177 gi|7661862 protein phosphatase 1F [Homo sapiens] 33 0.24 gi|149944715 protein phosphatase 1H (PP2C domain containing) [Ho... 32 0.91 gi|131412228 keratin 13 isoform b [Homo sapiens] 30 2.0 gi|131412225 keratin 13 isoform a [Homo sapiens] 30 2.0 gi|65506328 protein phosphatase 1J (PP2C domain containing) [Hom... 30 3.5 gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 30 3.5 gi|56788364 tubulin, gamma complex associated protein 6 [Homo sa... 30 3.5 gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 30 3.5 gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 30 3.5 gi|122937319 even-skipped homeobox 2 [Homo sapiens] 29 4.5 gi|4507353 TBP-associated factor 15 isoform 2 [Homo sapiens] 29 5.9 gi|21327701 TBP-associated factor 15 isoform 1 [Homo sapiens] 29 5.9 gi|194018511 keratin 77 [Homo sapiens] 29 5.9 gi|4506775 membrane-bound transcription factor site-1 protease p... 29 5.9 gi|62739186 complement factor H isoform a precursor [Homo sapiens] 28 7.7 gi|5174517 SMAD family member 7 [Homo sapiens] 28 7.7 gi|169167211 PREDICTED: FRAS1 related extracellular matrix 3 [Ho... 28 7.7 gi|239751535 PREDICTED: hypothetical protein [Homo sapiens] 28 7.7 gi|169166904 PREDICTED: FRAS1 related extracellular matrix 3 [Ho... 28 7.7 gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo ... 28 7.7 gi|169166334 PREDICTED: FRAS1 related extracellular matrix 3 [Ho... 28 7.7 gi|119395754 keratin 5 [Homo sapiens] 28 7.7 gi|167555104 interferon regulatory factor 4 [Homo sapiens] 28 7.7 gi|30089948 protein phosphatase 1E [Homo sapiens] 28 7.7 gi|7705793 lactamase, beta 2 [Homo sapiens] 28 7.7 gi|122937424 one cut homeobox 3 [Homo sapiens] 28 7.7 >gi|21281679 T-cell activation protein phosphatase 2C [Homo sapiens] Length = 304 Score = 617 bits (1591), Expect = e-177 Identities = 304/304 (100%), Positives = 304/304 (100%) Query: 1 MFSVLSYGRLVARAVLGGLSQTDPRAGGGGGGDYGLVTAGCGFGKDFRKGLLKKGACYGD 60 MFSVLSYGRLVARAVLGGLSQTDPRAGGGGGGDYGLVTAGCGFGKDFRKGLLKKGACYGD Sbjct: 1 MFSVLSYGRLVARAVLGGLSQTDPRAGGGGGGDYGLVTAGCGFGKDFRKGLLKKGACYGD 60 Query: 61 DACFVARHRSADVLGVADGVGGWRDYGVDPSQFSGTLMRTCERLVKEGRFVPSNPIGILT 120 DACFVARHRSADVLGVADGVGGWRDYGVDPSQFSGTLMRTCERLVKEGRFVPSNPIGILT Sbjct: 61 DACFVARHRSADVLGVADGVGGWRDYGVDPSQFSGTLMRTCERLVKEGRFVPSNPIGILT 120 Query: 121 TSYCELLQNKVPLLGSSTACIVVLDRTSHRLHTANLGDSGFLVVRGGEVVHRSDEQQHYF 180 TSYCELLQNKVPLLGSSTACIVVLDRTSHRLHTANLGDSGFLVVRGGEVVHRSDEQQHYF Sbjct: 121 TSYCELLQNKVPLLGSSTACIVVLDRTSHRLHTANLGDSGFLVVRGGEVVHRSDEQQHYF 180 Query: 181 NTPFQLSIAPPEAEGVVLSDSPDAADSTSFDVQLGDIILTATDGLFDNMPDYMILQELKK 240 NTPFQLSIAPPEAEGVVLSDSPDAADSTSFDVQLGDIILTATDGLFDNMPDYMILQELKK Sbjct: 181 NTPFQLSIAPPEAEGVVLSDSPDAADSTSFDVQLGDIILTATDGLFDNMPDYMILQELKK 240 Query: 241 LKNSNYESIQQTARSIAEQAHELAYDPNYMSPFAQFACDNGLNVRGGKPDDITVLLSIVA 300 LKNSNYESIQQTARSIAEQAHELAYDPNYMSPFAQFACDNGLNVRGGKPDDITVLLSIVA Sbjct: 241 LKNSNYESIQQTARSIAEQAHELAYDPNYMSPFAQFACDNGLNVRGGKPDDITVLLSIVA 300 Query: 301 EYTD 304 EYTD Sbjct: 301 EYTD 304 >gi|7661862 protein phosphatase 1F [Homo sapiens] Length = 454 Score = 33.5 bits (75), Expect = 0.24 Identities = 58/214 (27%), Positives = 87/214 (40%), Gaps = 47/214 (21%) Query: 76 VADGVGGWRDYGVDPSQFSGTLMRTCERLVKEGRFVPSNPIGILTTSYCE-----LLQNK 130 V DG GG VD ++++ + T E +P++P G L ++ L + K Sbjct: 196 VFDGHGG-----VDAARYAAVHVHTNAARQPE---LPTDPEGALREAFRRTDQMFLRKAK 247 Query: 131 VPLLGSSTA--CIVVLDRTSHRLHTANLGDSGFLVVRGGEVV-----HRSDEQ------- 176 L S T C ++ T LH A LGDS ++V+ G+VV HR + Q Sbjct: 248 RERLQSGTTGVCALIAGAT---LHVAWLGDSQVILVQQGQVVKLMEPHRPERQDEKARIE 304 Query: 177 ------QHYFNTPFQLSIAPPEAEGVV-----LSDSPDAADSTSFDVQLGDIILTATDGL 225 H ++A A G V +S DAA + D +L A DG Sbjct: 305 ALGGFVSHMDCWRVNGTLAVSRAIGDVFQKPYVSGEADAASRALTGSE--DYLLLACDGF 362 Query: 226 FDNMPDYMILQELKKLKNSNYESIQQTARSIAEQ 259 FD +P QE+ L S+ Q + +AE+ Sbjct: 363 FDVVPH----QEVVGLVQSHLTRQQGSGLRVAEE 392 >gi|149944715 protein phosphatase 1H (PP2C domain containing) [Homo sapiens] Length = 514 Score = 31.6 bits (70), Expect = 0.91 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 2/41 (4%) Query: 135 GSSTACIVVLDRTSHRLHTANLGDSGFLVVRGGEVVHRSDE 175 G TA IV+ +L+ AN GDS +++R GE++ S E Sbjct: 267 GGCTALIVIC--LLGKLYVANAGDSRAIIIRNGEIIPMSSE 305 >gi|131412228 keratin 13 isoform b [Homo sapiens] Length = 420 Score = 30.4 bits (67), Expect = 2.0 Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 1/33 (3%) Query: 27 GGGGGGDYGLVTAGCGFGKDFRKGLLKKGACYG 59 GGG GG YG G GFG F G + GAC G Sbjct: 66 GGGLGGGYGGGLGG-GFGGGFAGGFVDFGACDG 97 >gi|131412225 keratin 13 isoform a [Homo sapiens] Length = 458 Score = 30.4 bits (67), Expect = 2.0 Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 1/33 (3%) Query: 27 GGGGGGDYGLVTAGCGFGKDFRKGLLKKGACYG 59 GGG GG YG G GFG F G + GAC G Sbjct: 66 GGGLGGGYGGGLGG-GFGGGFAGGFVDFGACDG 97 >gi|65506328 protein phosphatase 1J (PP2C domain containing) [Homo sapiens] Length = 505 Score = 29.6 bits (65), Expect = 3.5 Identities = 13/36 (36%), Positives = 22/36 (61%) Query: 140 CIVVLDRTSHRLHTANLGDSGFLVVRGGEVVHRSDE 175 C +V+ +++ AN GDS ++VR GE++ S E Sbjct: 261 CALVVIYLLGKVYVANAGDSRAIIVRNGEIIPMSRE 296 >gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 [Homo sapiens] Length = 2191 Score = 29.6 bits (65), Expect = 3.5 Identities = 15/31 (48%), Positives = 17/31 (54%) Query: 12 ARAVLGGLSQTDPRAGGGGGGDYGLVTAGCG 42 A AV + AGGGGGG YG +AG G Sbjct: 278 AGAVAAAAAAAAAAAGGGGGGGYGGSSAGYG 308 >gi|56788364 tubulin, gamma complex associated protein 6 [Homo sapiens] Length = 1819 Score = 29.6 bits (65), Expect = 3.5 Identities = 14/31 (45%), Positives = 18/31 (58%) Query: 272 PFAQFACDNGLNVRGGKPDDITVLLSIVAEY 302 P F G++V G P+ I+ LLS VAEY Sbjct: 373 PAQAFVVKRGVHVSGASPESISSLLSEVAEY 403 >gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 [Homo sapiens] Length = 2231 Score = 29.6 bits (65), Expect = 3.5 Identities = 15/31 (48%), Positives = 17/31 (54%) Query: 12 ARAVLGGLSQTDPRAGGGGGGDYGLVTAGCG 42 A AV + AGGGGGG YG +AG G Sbjct: 278 AGAVAAAAAAAAAAAGGGGGGGYGGSSAGYG 308 >gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 [Homo sapiens] Length = 2178 Score = 29.6 bits (65), Expect = 3.5 Identities = 15/31 (48%), Positives = 17/31 (54%) Query: 12 ARAVLGGLSQTDPRAGGGGGGDYGLVTAGCG 42 A AV + AGGGGGG YG +AG G Sbjct: 278 AGAVAAAAAAAAAAAGGGGGGGYGGSSAGYG 308 >gi|122937319 even-skipped homeobox 2 [Homo sapiens] Length = 476 Score = 29.3 bits (64), Expect = 4.5 Identities = 16/36 (44%), Positives = 16/36 (44%) Query: 12 ARAVLGGLSQTDPRAGGGGGGDYGLVTAGCGFGKDF 47 A A L GGGGGG G AG G G DF Sbjct: 402 AAAAAAALGSRGGGGGGGGGGGGGGGGAGAGGGSDF 437 >gi|4507353 TBP-associated factor 15 isoform 2 [Homo sapiens] Length = 589 Score = 28.9 bits (63), Expect = 5.9 Identities = 26/73 (35%), Positives = 30/73 (41%), Gaps = 7/73 (9%) Query: 25 RAGGGGGGDYGLVTAGCGFGKDFRKGL-LKKGACYGDDACFVARHRSADVLGVADGVGGW 83 R+GGG GGD G G+G D G +G YG D R G G GG Sbjct: 447 RSGGGYGGD-----RGGGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGYGGDRGGYGGD 501 Query: 84 R-DYGVDPSQFSG 95 R YG D + G Sbjct: 502 RGGYGGDRGGYGG 514 >gi|21327701 TBP-associated factor 15 isoform 1 [Homo sapiens] Length = 592 Score = 28.9 bits (63), Expect = 5.9 Identities = 26/73 (35%), Positives = 30/73 (41%), Gaps = 7/73 (9%) Query: 25 RAGGGGGGDYGLVTAGCGFGKDFRKGL-LKKGACYGDDACFVARHRSADVLGVADGVGGW 83 R+GGG GGD G G+G D G +G YG D R G G GG Sbjct: 450 RSGGGYGGD-----RGGGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGYGGDRGGYGGD 504 Query: 84 R-DYGVDPSQFSG 95 R YG D + G Sbjct: 505 RGGYGGDRGGYGG 517 >gi|194018511 keratin 77 [Homo sapiens] Length = 578 Score = 28.9 bits (63), Expect = 5.9 Identities = 22/63 (34%), Positives = 24/63 (38%), Gaps = 8/63 (12%) Query: 20 SQTDPRAGGGGGGDYGLVTAGCGFGKDFRKGLLKKGACYGDDACFVARHRSADVLGVADG 79 SQ G GGGG YG G G G + G +G AR RS G G Sbjct: 492 SQVSVNGGAGGGGSYGSGGYGGGSGGGYGGGRSYRGG--------GARGRSGGGYGSGCG 543 Query: 80 VGG 82 GG Sbjct: 544 GGG 546 >gi|4506775 membrane-bound transcription factor site-1 protease preproprotein [Homo sapiens] Length = 1052 Score = 28.9 bits (63), Expect = 5.9 Identities = 13/37 (35%), Positives = 16/37 (43%) Query: 58 YGDDACFVARHRSADVLGVADGVGGWRDYGVDPSQFS 94 YGD C HR D + D + + YGV P S Sbjct: 844 YGDSNCLDDSHRQKDCFWLLDALLQYTSYGVTPPSLS 880 >gi|62739186 complement factor H isoform a precursor [Homo sapiens] Length = 1231 Score = 28.5 bits (62), Expect = 7.7 Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 6/77 (7%) Query: 185 QLSIAPPEAEGVVLSDSPDAADSTSFDVQLGDIILTATDGLFDNMPDYMILQELKKLKNS 244 QLS +PP G DS + S SF + +G +T G++ +P + + +LKK K+S Sbjct: 703 QLS-SPPYYYG----DSVEFNCSESFTM-IGHRSITCIHGVWTQLPQCVAIDKLKKCKSS 756 Query: 245 NYESIQQTARSIAEQAH 261 N +++ ++ E H Sbjct: 757 NLIILEEHLKNKKEFDH 773 >gi|5174517 SMAD family member 7 [Homo sapiens] Length = 426 Score = 28.5 bits (62), Expect = 7.7 Identities = 17/33 (51%), Positives = 17/33 (51%), Gaps = 2/33 (6%) Query: 16 LGGLSQTDPRAGGGGGGDYGLVTAGCGFGKDFR 48 L G TD RA G GGG G AGC GK R Sbjct: 37 LRGEGATDSRAHGAGGGGPG--RAGCCLGKAVR 67 >gi|169167211 PREDICTED: FRAS1 related extracellular matrix 3 [Homo sapiens] Length = 2139 Score = 28.5 bits (62), Expect = 7.7 Identities = 21/95 (22%), Positives = 45/95 (47%), Gaps = 1/95 (1%) Query: 169 VVHRSDEQQHYFNTPFQLSIAPPEAEGVVLSDSPDAADSTSFDVQLGDIILTATDGLFDN 228 ++ R ++ H + F L+I P + E +++ + + + VQ+ +L+ATD ++ Sbjct: 517 IIFRMEDGHHQVDFLFPLTILPVDDEPPMVNTNTGLSLTEGQVVQISPFVLSATDIDSED 576 Query: 229 MPDYMILQELKKLKNSNYESIQQTARSIAEQAHEL 263 + +L E + LK + E + A + H L Sbjct: 577 STIHFVL-ENQPLKGNEEEPQWELAPGSSHSGHYL 610 >gi|239751535 PREDICTED: hypothetical protein [Homo sapiens] Length = 255 Score = 28.5 bits (62), Expect = 7.7 Identities = 34/100 (34%), Positives = 41/100 (41%), Gaps = 25/100 (25%) Query: 20 SQTDPRAGGGGGGDYGLVTAGCGFGKDFRKGLLKKGAC----YGDDACFVARHRSADVLG 75 S PRA GGGGGD G G G R+ + G C Y D CF R D L Sbjct: 34 SPRGPRA-GGGGGDAG------GGGAPVRRA--RGGGCWARAYQDARCF-GRGEGGD-LQ 82 Query: 76 VADGVGGWRDYGVDPSQFSGTLMRTCERLVKEGRFVPSNP 115 V+ G G P++F R R + R VP+ P Sbjct: 83 VSSGPG-----AAPPAEF-----RASARSAQGSRDVPAGP 112 >gi|169166904 PREDICTED: FRAS1 related extracellular matrix 3 [Homo sapiens] Length = 2139 Score = 28.5 bits (62), Expect = 7.7 Identities = 21/95 (22%), Positives = 45/95 (47%), Gaps = 1/95 (1%) Query: 169 VVHRSDEQQHYFNTPFQLSIAPPEAEGVVLSDSPDAADSTSFDVQLGDIILTATDGLFDN 228 ++ R ++ H + F L+I P + E +++ + + + VQ+ +L+ATD ++ Sbjct: 517 IIFRMEDGHHQVDFLFPLTILPVDDEPPMVNTNTGLSLTEGQVVQISPFVLSATDIDSED 576 Query: 229 MPDYMILQELKKLKNSNYESIQQTARSIAEQAHEL 263 + +L E + LK + E + A + H L Sbjct: 577 STIHFVL-ENQPLKGNEEEPQWELAPGSSHSGHYL 610 >gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo sapiens] Length = 255 Score = 28.5 bits (62), Expect = 7.7 Identities = 34/100 (34%), Positives = 41/100 (41%), Gaps = 25/100 (25%) Query: 20 SQTDPRAGGGGGGDYGLVTAGCGFGKDFRKGLLKKGAC----YGDDACFVARHRSADVLG 75 S PRA GGGGGD G G G R+ + G C Y D CF R D L Sbjct: 34 SPRGPRA-GGGGGDAG------GGGAPVRRA--RGGGCWARAYQDARCF-GRGEGGD-LQ 82 Query: 76 VADGVGGWRDYGVDPSQFSGTLMRTCERLVKEGRFVPSNP 115 V+ G G P++F R R + R VP+ P Sbjct: 83 VSSGPG-----AAPPAEF-----RASARSAQGSRDVPAGP 112 >gi|169166334 PREDICTED: FRAS1 related extracellular matrix 3 [Homo sapiens] Length = 2139 Score = 28.5 bits (62), Expect = 7.7 Identities = 21/95 (22%), Positives = 45/95 (47%), Gaps = 1/95 (1%) Query: 169 VVHRSDEQQHYFNTPFQLSIAPPEAEGVVLSDSPDAADSTSFDVQLGDIILTATDGLFDN 228 ++ R ++ H + F L+I P + E +++ + + + VQ+ +L+ATD ++ Sbjct: 517 IIFRMEDGHHQVDFLFPLTILPVDDEPPMVNTNTGLSLTEGQVVQISPFVLSATDIDSED 576 Query: 229 MPDYMILQELKKLKNSNYESIQQTARSIAEQAHEL 263 + +L E + LK + E + A + H L Sbjct: 577 STIHFVL-ENQPLKGNEEEPQWELAPGSSHSGHYL 610 >gi|119395754 keratin 5 [Homo sapiens] Length = 590 Score = 28.5 bits (62), Expect = 7.7 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 6/39 (15%) Query: 12 ARAVLGGLSQTD----PRAGGGGGGDYGLVT--AGCGFG 44 A A+ +S+T R+GGGGGG +G V+ CG G Sbjct: 20 ASAITPSVSRTSFTSVSRSGGGGGGGFGRVSLAGACGVG 58 >gi|167555104 interferon regulatory factor 4 [Homo sapiens] Length = 451 Score = 28.5 bits (62), Expect = 7.7 Identities = 10/19 (52%), Positives = 13/19 (68%) Query: 27 GGGGGGDYGLVTAGCGFGK 45 GGG GG++G+ CG GK Sbjct: 5 GGGRGGEFGMSAVSCGNGK 23 >gi|30089948 protein phosphatase 1E [Homo sapiens] Length = 755 Score = 28.5 bits (62), Expect = 7.7 Identities = 36/132 (27%), Positives = 54/132 (40%), Gaps = 28/132 (21%) Query: 151 LHTANLGDSGFLVVRGGEVVH--------RSDEQQHY--------------FNTPFQLSI 188 LH A +GDS ++VR G+ V R DE+Q N +S Sbjct: 342 LHVAWVGDSQVMLVRKGQAVELMKPHKPDREDEKQRIEALGGCVVWFGAWRVNGSLSVSR 401 Query: 189 APPEAE--GVVLSDSPDAADSTSFDVQLGDIILTATDGLFDNM-PDYMILQELKKLKNSN 245 A +AE + D+ A ST D D ++ A DG +D + PD + LK +N Sbjct: 402 AIGDAEHKPYICGDADSA--STVLD-GTEDYLILACDGFYDTVNPDEAVKVVSDHLKENN 458 Query: 246 YESIQQTARSIA 257 +S + +A Sbjct: 459 GDSSMVAHKLVA 470 >gi|7705793 lactamase, beta 2 [Homo sapiens] Length = 288 Score = 28.5 bits (62), Expect = 7.7 Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 13/107 (12%) Query: 137 STACIVVLDRTSHRLHTANLGDSGFLVVRGGEVVHRSDEQQHYFNTPFQLSIAPPEAEGV 196 +T CI L R R G+ ++ ++ G+V+ TP + Sbjct: 97 TTYCIKKLPRNPQREEIIGNGEQQYVYLKDGDVIKTEGATLRVLYTP-----GHTDDHMA 151 Query: 197 VLSDSPDAADSTSFDVQLGDIILTATDGLFDNMPDYM-ILQELKKLK 242 +L + +A S GD IL +F+++ DYM L+EL K+K Sbjct: 152 LLLEEENAIFS-------GDCILGEGTTVFEDLYDYMNSLKELLKIK 191 >gi|122937424 one cut homeobox 3 [Homo sapiens] Length = 494 Score = 28.5 bits (62), Expect = 7.7 Identities = 18/35 (51%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Query: 15 VLGGLSQTDPRAGGGGGGDYGLVTAG-CGFGKDFR 48 V G S D GGGGGG G AG G G DFR Sbjct: 47 VAGMASLLDGGGGGGGGGAGGAGGAGSAGGGADFR 81 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.319 0.138 0.413 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,699,146 Number of Sequences: 37866 Number of extensions: 513133 Number of successful extensions: 2012 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 17 Number of HSP's that attempted gapping in prelim test: 1950 Number of HSP's gapped (non-prelim): 78 length of query: 304 length of database: 18,247,518 effective HSP length: 102 effective length of query: 202 effective length of database: 14,385,186 effective search space: 2905807572 effective search space used: 2905807572 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.