Guide to the Human Genome
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Name: PPM1E Sequence: fasta or formatted (755aa) NCBI GI: 30089948
Description:

protein phosphatase 1E

Referenced in:

Serine / Threonine Protein Phosphatases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         60           4
 C cysteine            2.1         16           2
 D aspartate           5.6         42           2
 E glutamate          11.0         83           5
 F phenylalanine       3.7         28           1
 G glycine             7.0         53           3
 H histidine           3.0         23           2
 I isoleucine          3.3         25           1
 K lysine              4.8         36           2
 L leucine             7.7         58           2
 M methionine          2.0         15           2
 N asparagine          3.3         25           2
 P proline             7.5         57           5
 Q glutamine           3.6         27           2
 R arginine            5.6         42           3
 S serine              8.1         61           2
 T threonine           3.7         28           2
 V valine              6.2         47           2
 W tryptophan          1.5         11           1
 Y tyrosine            2.4         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein phosphatase 1E 
PPM1F                 0.224   protein phosphatase 1F 
ILKAP                 0.063   integrin-linked kinase-associated protein phosphatas...
PPM1L                 0.059   protein phosphatase 1 (formerly 2C)-like 
PPM1K                 0.056   protein phosphatase 1K (PP2C domain containing) [Ho...
PPM1B                 0.052   protein phosphatase 1B isoform 5 
PPM1B                 0.052   protein phosphatase 1B isoform 2 
PPM1B                 0.052   protein phosphatase 1B isoform 1 
PPM1B                 0.051   protein phosphatase 1B isoform 4 
FLJ40125              0.050   protein phosphatase 1B-like 
PPM1A                 0.045   protein phosphatase 1A isoform 2 
PPM1A                 0.045   protein phosphatase 1A isoform 1 
PPM1A                 0.045   protein phosphatase 1A isoform 3 
PPM1G                 0.043   protein phosphatase 1G 
PPM1G                 0.043   protein phosphatase 1G 
PPM1D                 0.037   protein phosphatase 1D 
DGKK                  0.022   diacylglycerol kinase kappa 
PHLPP1                0.020   PH domain and leucine rich repeat protein phosphatas...
PELP1                 0.020   proline, glutamic acid and leucine rich protein 1 [...
CHD3                  0.019   chromodomain helicase DNA binding protein 3 isoform...
RP1L1                 0.019   retinitis pigmentosa 1-like 1 
PRRT2                 0.019   proline-rich transmembrane protein 2 
RPGR                  0.018   retinitis pigmentosa GTPase regulator isoform C [Hom...
LOC65998              0.018   hypothetical protein LOC65998 
ALMS1                 0.018   Alstrom syndrome 1 
KIAA1522              0.018   hypothetical protein LOC57648 
SETD1A                0.018   SET domain containing 1A 
SASH1                 0.017   SAM and SH3 domain containing 1 
PPP1R13L              0.017   protein phosphatase 1, regulatory subunit 13 like [...
PPP1R13L              0.017   protein phosphatase 1, regulatory subunit 13 like [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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