HLTF 12638

Name: HLTF	Sequence: fasta or formatted (1009aa)		NCBI GI: 21071052
Description: helicase-like transcription factor		Referenced in: Nonhistone Chromosomal Proteins Ring Finger Proteins
Other entries for this name: alt mRNA [1009aa] helicase-like transcription factor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 58 2 C cysteine 1.8 18 2 D aspartate 5.5 55 2 E glutamate 7.0 71 2 F phenylalanine 3.6 36 2 G glycine 5.7 58 2 H histidine 2.5 25 1 I isoleucine 5.6 56 2 K lysine 8.7 88 3 L leucine 10.1 102 3 M methionine 2.4 24 1 N asparagine 5.3 53 3 P proline 5.1 51 2 Q glutamine 3.9 39 2 R arginine 5.3 53 2 S serine 7.1 72 3 T threonine 5.6 57 2 V valine 5.7 58 2 W tryptophan 1.4 14 2 Y tyrosine 2.1 21 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 helicase-like transcription factor HLTF 1.000 helicase-like transcription factor TTF2 0.115 transcription termination factor, RNA polymerase II ... HELLS 0.062 helicase, lymphoid-specific SMARCAD1 0.060 SWI/SNF-related, matrix-associated actin-dependent ... SMARCAD1 0.060 SWI/SNF-related, matrix-associated actin-dependent ... SMARCAD1 0.059 SWI/SNF-related, matrix-associated actin-dependent ... SHPRH 0.043 SNF2 histone linker PHD RING helicase isoform a [Ho... SHPRH 0.043 SNF2 histone linker PHD RING helicase isoform b [Hom... CHD2 0.037 chromodomain helicase DNA binding protein 2 isoform... SMARCA4 0.036 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.036 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.036 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.036 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.036 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.036 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.036 SWI/SNF-related matrix-associated actin-dependent re... ERCC6L 0.036 excision repair protein ERCC6-like CHD4 0.036 chromodomain helicase DNA binding protein 4 SMARCA1 0.036 SWI/SNF-related matrix-associated actin-dependent r... SMARCA1 0.036 SWI/SNF-related matrix-associated actin-dependent re... CHD5 0.036 chromodomain helicase DNA binding protein 5 CHD3 0.035 chromodomain helicase DNA binding protein 3 isoform ... CHD3 0.035 chromodomain helicase DNA binding protein 3 isoform ... CHD3 0.035 chromodomain helicase DNA binding protein 3 isoform... INO80 0.035 INO80 complex homolog 1 SRCAP 0.035 Snf2-related CBP activator protein SMARCA2 0.035 SWI/SNF-related matrix-associated actin-dependent re... SMARCA2 0.035 SWI/SNF-related matrix-associated actin-dependent re... RAD54B 0.034 RAD54 homolog B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.