CHD3 32307

Name: CHD3	Sequence: fasta or formatted (2000aa)		NCBI GI: 52630326
Description: chromodomain helicase DNA binding protein 3 isoform 1		Referenced in: Nonhistone Chromosomal Proteins PHD Finger Proteins Small RNAs in RNA Processing
Other entries for this name: alt prot [2059aa] chromodomain helicase DNA binding protein 3 isoform 3 alt prot [1966aa] chromodomain helicase DNA binding protein 3 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 148 10 C cysteine 1.4 27 2 D aspartate 5.5 110 2 E glutamate 10.2 203 5 F phenylalanine 3.1 62 2 G glycine 7.4 148 3 H histidine 2.5 49 2 I isoleucine 4.0 79 2 K lysine 8.5 170 5 L leucine 8.3 167 3 M methionine 2.4 48 2 N asparagine 3.6 72 2 P proline 6.9 138 4 Q glutamine 3.9 77 3 R arginine 6.9 138 3 S serine 5.6 112 2 T threonine 3.9 77 2 V valine 4.4 88 2 W tryptophan 1.5 30 1 Y tyrosine 2.9 57 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 chromodomain helicase DNA binding protein 3 isoform ... CHD3 0.983 chromodomain helicase DNA binding protein 3 isoform... CHD3 0.978 chromodomain helicase DNA binding protein 3 isoform ... CHD5 0.657 chromodomain helicase DNA binding protein 5 CHD4 0.639 chromodomain helicase DNA binding protein 4 CHD2 0.137 chromodomain helicase DNA binding protein 2 isoform... CHD1 0.133 chromodomain helicase DNA binding protein 1 CHD7 0.123 chromodomain helicase DNA binding protein 7 CHD8 0.120 chromodomain helicase DNA binding protein 8 CHD6 0.120 chromodomain helicase DNA binding protein 6 CHD9 0.118 chromodomain helicase DNA binding protein 9 SMARCA1 0.103 SWI/SNF-related matrix-associated actin-dependent r... SMARCA1 0.101 SWI/SNF-related matrix-associated actin-dependent re... SMARCA5 0.098 SWI/SNF-related matrix-associated actin-dependent re... CHD1L 0.095 chromodomain helicase DNA binding protein 1-like [H... SMARCA4 0.094 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.093 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.093 SWI/SNF-related matrix-associated actin-dependent r... SMARCA2 0.093 SWI/SNF-related matrix-associated actin-dependent re... SMARCA4 0.092 SWI/SNF-related matrix-associated actin-dependent r... SMARCA2 0.092 SWI/SNF-related matrix-associated actin-dependent re... SMARCA4 0.090 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.090 SWI/SNF-related matrix-associated actin-dependent re... SMARCA4 0.089 SWI/SNF-related matrix-associated actin-dependent r... HELLS 0.065 helicase, lymphoid-specific SMARCAD1 0.060 SWI/SNF-related, matrix-associated actin-dependent ... SMARCAD1 0.060 SWI/SNF-related, matrix-associated actin-dependent ... SMARCAD1 0.060 SWI/SNF-related, matrix-associated actin-dependent ... ERCC6 0.058 excision repair cross-complementing rodent repair def... C9orf102 0.048 RAD26L hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.