CHD3 32306

Name: CHD3	Sequence: fasta or formatted (1966aa)		NCBI GI: 52630322
Description: chromodomain helicase DNA binding protein 3 isoform 2		Referenced in: Nonhistone Chromosomal Proteins PHD Finger Proteins Small RNAs in RNA Processing
Other entries for this name: alt prot [2059aa] chromodomain helicase DNA binding protein 3 isoform 3 alt prot [2000aa] chromodomain helicase DNA binding protein 3 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.5 147 10 C cysteine 1.4 27 2 D aspartate 5.5 108 2 E glutamate 9.9 195 5 F phenylalanine 3.2 62 2 G glycine 7.2 142 3 H histidine 2.4 48 2 I isoleucine 4.0 79 2 K lysine 8.5 168 5 L leucine 8.4 165 3 M methionine 2.4 48 2 N asparagine 3.7 72 2 P proline 6.9 135 4 Q glutamine 3.9 76 3 R arginine 6.8 134 3 S serine 5.6 111 2 T threonine 3.8 74 2 V valine 4.5 88 2 W tryptophan 1.5 30 1 Y tyrosine 2.9 57 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 chromodomain helicase DNA binding protein 3 isoform ... CHD3 0.996 chromodomain helicase DNA binding protein 3 isoform ... CHD3 0.979 chromodomain helicase DNA binding protein 3 isoform... CHD5 0.670 chromodomain helicase DNA binding protein 5 CHD4 0.649 chromodomain helicase DNA binding protein 4 CHD2 0.138 chromodomain helicase DNA binding protein 2 isoform... CHD1 0.135 chromodomain helicase DNA binding protein 1 CHD7 0.125 chromodomain helicase DNA binding protein 7 CHD8 0.122 chromodomain helicase DNA binding protein 8 CHD6 0.122 chromodomain helicase DNA binding protein 6 CHD9 0.120 chromodomain helicase DNA binding protein 9 SMARCA1 0.105 SWI/SNF-related matrix-associated actin-dependent r... SMARCA1 0.102 SWI/SNF-related matrix-associated actin-dependent re... SMARCA5 0.099 SWI/SNF-related matrix-associated actin-dependent re... CHD1L 0.096 chromodomain helicase DNA binding protein 1-like [H... SMARCA4 0.095 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.095 SWI/SNF-related matrix-associated actin-dependent r... SMARCA2 0.094 SWI/SNF-related matrix-associated actin-dependent re... SMARCA4 0.094 SWI/SNF-related matrix-associated actin-dependent r... SMARCA2 0.094 SWI/SNF-related matrix-associated actin-dependent re... SMARCA4 0.094 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.092 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.092 SWI/SNF-related matrix-associated actin-dependent re... SMARCA4 0.090 SWI/SNF-related matrix-associated actin-dependent r... HELLS 0.066 helicase, lymphoid-specific SMARCAD1 0.061 SWI/SNF-related, matrix-associated actin-dependent ... SMARCAD1 0.061 SWI/SNF-related, matrix-associated actin-dependent ... SMARCAD1 0.061 SWI/SNF-related, matrix-associated actin-dependent ... ERCC6 0.059 excision repair cross-complementing rodent repair def... C9orf102 0.048 RAD26L hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.