SHPRH 24309

Name: SHPRH	Sequence: fasta or formatted (1659aa)		NCBI GI: 27436873
Description: SNF2 histone linker PHD RING helicase isoform b		Referenced in: PHD Finger Proteins
Other entries for this name: alt prot [1687aa] SNF2 histone linker PHD RING helicase isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.9 81 2 C cysteine 2.7 45 2 D aspartate 4.7 78 5 E glutamate 8.5 141 3 F phenylalanine 3.1 51 1 G glycine 4.2 69 2 H histidine 3.4 57 1 I isoleucine 6.6 110 3 K lysine 7.5 125 2 L leucine 9.8 162 3 M methionine 2.0 34 1 N asparagine 3.6 59 2 P proline 4.9 82 2 Q glutamine 5.2 87 2 R arginine 5.8 96 2 S serine 7.7 128 3 T threonine 4.9 81 3 V valine 6.1 102 3 W tryptophan 1.3 22 2 Y tyrosine 3.0 49 5			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 SNF2 histone linker PHD RING helicase isoform b [Hom... SHPRH 0.998 SNF2 histone linker PHD RING helicase isoform a [Ho... TTF2 0.026 transcription termination factor, RNA polymerase II ... HLTF 0.026 helicase-like transcription factor HLTF 0.026 helicase-like transcription factor ERCC6L 0.016 excision repair protein ERCC6-like HELLS 0.015 helicase, lymphoid-specific ZRANB3 0.013 zinc finger, RAN-binding domain containing 3 BTAF1 0.013 BTAF1 RNA polymerase II, B-TFIID transcription facto... CHD5 0.013 chromodomain helicase DNA binding protein 5 C9orf102 0.013 RAD26L hypothetical protein SMARCA5 0.012 SWI/SNF-related matrix-associated actin-dependent re... SMARCA1 0.012 SWI/SNF-related matrix-associated actin-dependent r... SMARCA1 0.012 SWI/SNF-related matrix-associated actin-dependent re... CHD4 0.012 chromodomain helicase DNA binding protein 4 ERCC6 0.012 excision repair cross-complementing rodent repair def... INO80 0.011 INO80 complex homolog 1 CHD2 0.011 chromodomain helicase DNA binding protein 2 isoform... CHD3 0.011 chromodomain helicase DNA binding protein 3 isoform ... CHD3 0.011 chromodomain helicase DNA binding protein 3 isoform ... CHD3 0.011 chromodomain helicase DNA binding protein 3 isoform... SRCAP 0.011 Snf2-related CBP activator protein SMARCAD1 0.011 SWI/SNF-related, matrix-associated actin-dependent ... SMARCAD1 0.011 SWI/SNF-related, matrix-associated actin-dependent ... SMARCAD1 0.011 SWI/SNF-related, matrix-associated actin-dependent ... HIST1H1D 0.010 histone cluster 1, H1d CHD1L 0.010 chromodomain helicase DNA binding protein 1-like [H... HIST1H1B 0.010 histone cluster 1, H1b CHD1 0.010 chromodomain helicase DNA binding protein 1 HIST1H1E 0.010 histone cluster 1, H1e Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.