Guide to the Human Genome
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Name: RNF185 Sequence: fasta or formatted (136aa) NCBI GI: 209529683
Description:

ring finger protein 185 isoform 2

Referenced in:

Ring Finger Proteins

Other entries for this name:
alt prot [192aa] ring finger protein 185 isoform 1
alt prot [192aa] ring finger protein 185 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6         13           1
 C cysteine            3.7          5           1
 D aspartate           4.4          6           1
 E glutamate           2.9          4           1
 F phenylalanine      11.0         15           1
 G glycine            14.7         20           2
 H histidine           1.5          2           1
 I isoleucine          5.1          7           1
 K lysine              1.5          2           1
 L leucine             7.4         10           2
 M methionine          2.2          3           1
 N asparagine          3.7          5           1
 P proline             7.4         10           3
 Q glutamine           4.4          6           1
 R arginine            1.5          2           1
 S serine             10.3         14           2
 T threonine           2.9          4           1
 V valine              3.7          5           1
 W tryptophan          1.5          2           1
 Y tyrosine            0.7          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ring finger protein 185 isoform 2 
RNF185                0.669   ring finger protein 185 isoform 1 
RNF185                0.669   ring finger protein 185 isoform 1 
RNF5                  0.274   ring finger protein 5 
RFWD2                 0.072   ring finger and WD repeat domain 2 isoform a 
RFWD2                 0.072   ring finger and WD repeat domain 2 isoform d24 [Homo...
LOC100287499          0.068   PREDICTED: hypothetical protein 
LOC100287499          0.068   PREDICTED: hypothetical protein XP_002343643 
TRAF6                 0.057   TNF receptor-associated factor 6 
TRAF6                 0.057   TNF receptor-associated factor 6 
HLTF                  0.057   helicase-like transcription factor 
HLTF                  0.057   helicase-like transcription factor 
TRIM47                0.057   tripartite motif-containing 47 
CBLC                  0.053   Cas-Br-M (murine) ecotropic retroviral transforming...
CBLC                  0.053   Cas-Br-M (murine) ecotropic retroviral transforming...
MEX3B                 0.049   mex-3 homolog B 
TRIM77                0.046   PREDICTED: tripartite motif-containing 77 
TRIM77                0.046   PREDICTED: tripartite motif-containing 77 
LOC100289112          0.046   PREDICTED: hypothetical protein XP_002343148 
PEX10                 0.046   peroxisome biogenesis factor 10 isoform 1 
PEX10                 0.046   peroxisome biogenesis factor 10 isoform 2 
TRIM77                0.046   tripartite motif-containing 77 
TRIM40                0.046   tripartite motif-containing 40 
TRIM75                0.046   tripartite motif-containing 75 
CBL                   0.046   Cas-Br-M (murine) ecotropic retroviral transforming ...
CBLB                  0.042   Cas-Br-M (murine) ecotropic retroviral transforming ...
TRIM4                 0.042   tripartite motif protein TRIM4 isoform alpha 
TRIM4                 0.042   tripartite motif protein TRIM4 isoform beta 
SIAH2                 0.042   seven in absentia homolog 2 
RNF10                 0.042   ring finger protein 10 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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