Guide to the Human Genome
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Name: RFWD2 Sequence: fasta or formatted (707aa) NCBI GI: 50233824
Description:

ring finger and WD repeat domain 2 isoform d24

Referenced in:

Ring Finger Proteins
Signalosome
Small RNAs in RNA Processing
WD Repeat Proteins

Other entries for this name:
alt prot [731aa] ring finger and WD repeat domain 2 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         51           3
 C cysteine            3.1         22           2
 D aspartate           5.8         41           2
 E glutamate           5.1         36           2
 F phenylalanine       3.8         27           1
 G glycine             6.5         46           3
 H histidine           2.4         17           1
 I isoleucine          3.8         27           2
 K lysine              6.4         45           3
 L leucine             8.5         60           2
 M methionine          1.4         10           1
 N asparagine          4.8         34           2
 P proline             3.8         27           2
 Q glutamine           3.5         25           1
 R arginine            4.2         30           2
 S serine             13.9         98           4
 T threonine           3.8         27           1
 V valine              6.6         47           2
 W tryptophan          1.3          9           1
 Y tyrosine            4.0         28           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ring finger and WD repeat domain 2 isoform d24 [Homo... 
RFWD2                 0.987   ring finger and WD repeat domain 2 isoform a 
WDR5B                 0.048   WD repeat domain 5B 
WDR5                  0.047   WD repeat domain 5 
WDR5                  0.047   WD repeat domain 5 
TAF5                  0.044   TBP-associated factor 5 
RBBP4                 0.036   retinoblastoma binding protein 4 isoform c 
RBBP4                 0.036   retinoblastoma binding protein 4 isoform b 
RBBP4                 0.036   retinoblastoma binding protein 4 isoform a 
WDR51B                0.036   WD repeat domain 51B 
RBBP7                 0.034   retinoblastoma binding protein 7 
TAF5L                 0.033   PCAF associated factor 65 beta isoform a 
PEX7                  0.030   peroxisomal biogenesis factor 7 
WDR69                 0.028   WD repeat domain 69 
WDR51A                0.028   WD repeat domain 51A isoform 3 
WDR51A                0.028   WD repeat domain 51A isoform 2 
WDR51A                0.028   WD repeat domain 51A isoform 1 
KATNB1                0.026   katanin p80 subunit B 1 
GNB1                  0.026   guanine nucleotide-binding protein, beta-1 subunit [...
WDR33                 0.026   WD repeat domain 33 isoform 1 
WDR38                 0.026   WD repeat domain 38 
PRPF4                 0.026   PRP4 pre-mRNA processing factor 4 homolog 
FBXW7                 0.026   F-box and WD repeat domain containing 7 isoform 3 [H...
FBXW7                 0.026   F-box and WD repeat domain containing 7 isoform 1 [H...
FBXW7                 0.026   F-box and WD repeat domain containing 7 isoform 2 [H...
TBL1Y                 0.026   transducin beta-like 1Y 
TBL1Y                 0.026   transducin beta-like 1Y 
TBL1Y                 0.026   transducin beta-like 1Y 
GNB4                  0.026   guanine nucleotide-binding protein, beta-4 subunit [...
PWP1                  0.026   periodic tryptophan protein 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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