Guide to the Human Genome
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Name: MEX3B Sequence: fasta or formatted (569aa) NCBI GI: 47716512
Description:

mex-3 homolog B

Referenced in:

Ring Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         52           3
 C cysteine            2.3         13           1
 D aspartate           3.9         22           2
 E glutamate           5.3         30           2
 F phenylalanine       2.6         15           1
 G glycine            11.4         65           6
 H histidine           2.6         15           2
 I isoleucine          3.5         20           2
 K lysine              2.6         15           2
 L leucine             6.7         38           2
 M methionine          1.2          7           1
 N asparagine          4.0         23           5
 P proline             8.8         50           3
 Q glutamine           2.6         15           3
 R arginine            5.8         33           2
 S serine             14.1         80          16
 T threonine           5.3         30           2
 V valine              5.8         33           2
 W tryptophan          0.4          2           1
 Y tyrosine            1.9         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mex-3 homolog B 
MEX3C                 0.427   ring finger and KH domain containing 2 
MEX3D                 0.377   ring finger and KH domain containing 1 
MEX3A                 0.324   MEX3A protein 
KHSRP                 0.026   KH-type splicing regulatory protein 
ANKRD17               0.025   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.025   ankyrin repeat domain protein 17 isoform b 
XIAP                  0.024   baculoviral IAP repeat-containing protein 4 
FUBP1                 0.024   far upstream element-binding protein 
MUC21                 0.022   mucin 21 
SRRM2                 0.022   splicing coactivator subunit SRm300 
NEURL1B               0.022   neuralized homolog 1B 
BIRC2                 0.021   baculoviral IAP repeat-containing protein 2 
BIRC3                 0.021   baculoviral IAP repeat-containing protein 3 
BIRC3                 0.021   baculoviral IAP repeat-containing protein 3 
MED1                  0.020   mediator complex subunit 1 
LOC100133915          0.020   PREDICTED: hypothetical protein 
NKX6-1                0.020   NK6 transcription factor related, locus 1 
DACH1                 0.020   dachshund homolog 1 isoform b 
DACH1                 0.020   dachshund homolog 1 isoform a 
DACH1                 0.020   dachshund homolog 1 isoform c 
GREB1                 0.020   GREB1 protein isoform a 
TNRC18                0.020   trinucleotide repeat containing 18 
MYLIP                 0.020   myosin regulatory light chain interacting protein [H...
NEURL                 0.019   neuralized-like 
CEBPB                 0.019   CCAAT/enhancer binding protein beta 
HRNR                  0.019   hornerin 
RFWD2                 0.019   ring finger and WD repeat domain 2 isoform a 
RFWD2                 0.019   ring finger and WD repeat domain 2 isoform d24 [Homo...
PRDM2                 0.019   retinoblastoma protein-binding zinc finger protein i...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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