NMD3 11711

Name: NMD3	Sequence: fasta or formatted (503aa)		NCBI GI: 19923796
Description: NMD3 homolog		Referenced in: Nucleus and Nucleolus
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.2 26 2 C cysteine 4.2 21 2 D aspartate 6.6 33 2 E glutamate 6.4 32 2 F phenylalanine 3.0 15 1 G glycine 4.0 20 1 H histidine 3.2 16 1 I isoleucine 6.6 33 1 K lysine 7.4 37 2 L leucine 8.7 44 2 M methionine 2.8 14 1 N asparagine 4.4 22 1 P proline 3.8 19 2 Q glutamine 6.2 31 2 R arginine 5.2 26 3 S serine 6.8 34 2 T threonine 4.4 22 1 V valine 7.4 37 2 W tryptophan 1.2 6 1 Y tyrosine 3.0 15 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 NMD3 homolog DHX40 0.010 DEAH (Asp-Glu-Ala-His) box polypeptide 40 RNF20 0.009 ring finger protein 20 KIF21A 0.009 kinesin family member 21A LOC283767 0.008 golgi autoantigen, golgin subfamily a-like MPHOSPH10 0.008 M-phase phosphoprotein 10 PITPNM2 0.008 phosphatidylinositol transfer protein, membrane-asso... LOC440243 0.007 PREDICTED: Putative golgin subfamily A member 6-lik... PITPNM1 0.007 phosphatidylinositol transfer protein, membrane-ass... PITPNM1 0.007 phosphatidylinositol transfer protein, membrane-ass... SFRS12 0.007 splicing factor, arginine/serine-rich 12 isoform a ... SFRS12 0.007 splicing factor, arginine/serine-rich 12 isoform b [... ZNF804A 0.007 zinc finger protein 804A XPO6 0.007 exportin 6 LOC727832 0.006 golgi autoantigen, golgin subfamily a-like TSGA10 0.006 testis specific, 10 TSGA10 0.006 testis specific, 10 SMARCA2 0.006 SWI/SNF-related matrix-associated actin-dependent re... SMARCA2 0.006 SWI/SNF-related matrix-associated actin-dependent re... ARID4A 0.006 retinoblastoma-binding protein 1 isoform III ARID4A 0.006 retinoblastoma-binding protein 1 isoform II ARID4A 0.006 retinoblastoma-binding protein 1 isoform I ZC3H13 0.006 zinc finger CCCH-type containing 13 CHD3 0.006 chromodomain helicase DNA binding protein 3 isoform ... CHD3 0.006 chromodomain helicase DNA binding protein 3 isoform ... CHD3 0.006 chromodomain helicase DNA binding protein 3 isoform... LEO1 0.006 Leo1, Paf1/RNA polymerase II complex component, homo... SMARCA4 0.005 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.005 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.005 SWI/SNF-related matrix-associated actin-dependent r... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.